RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
GJB1-202ENST00000374022 KIF3BO15066 747 aa19.06■□□□□ 0.64
GJB1-202ENST00000374022 PRDM15P57071 1507 aaPredicted RBP19.05■□□□□ 0.64
GJB1-202ENST00000374022 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
GJB1-202ENST00000374022 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
GJB1-202ENST00000374022 ACIN1Q9UKV3 1341 aaKnown RBP19.02■□□□□ 0.64
GJB1-202ENST00000374022 CEP152O94986 1710 aa19.01■□□□□ 0.63
GJB1-202ENST00000374022 TRIM52Q96A61 297 aa19■□□□□ 0.63
GJB1-202ENST00000374022 VWDEQ8N2E2 1590 aa19■□□□□ 0.63
GJB1-202ENST00000374022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.63
GJB1-202ENST00000374022 NUP155O75694 1391 aa18.98■□□□□ 0.63
GJB1-202ENST00000374022 ZC3H13Q5T200 1668 aaKnown RBP18.98■□□□□ 0.63
GJB1-202ENST00000374022 ARID4BQ4LE39 1312 aaPredicted RBP18.98■□□□□ 0.63
GJB1-202ENST00000374022 FAM135AQ9P2D6 1515 aa18.98■□□□□ 0.63
GJB1-202ENST00000374022 PZPP20742 1482 aa18.97■□□□□ 0.63
GJB1-202ENST00000374022 GGT6Q6P531 493 aa18.97■□□□□ 0.63
GJB1-202ENST00000374022 KANK1Q14678 1352 aa18.97■□□□□ 0.63
GJB1-202ENST00000374022 TET3O43151 1660 aa18.95■□□□□ 0.62
GJB1-202ENST00000374022 ABCC3O15438 1527 aa18.94■□□□□ 0.62
GJB1-202ENST00000374022 CLTCQ00610 1675 aaKnown RBP18.94■□□□□ 0.62
GJB1-202ENST00000374022 MLECQ14165 292 aa18.94■□□□□ 0.62
GJB1-202ENST00000374022 FER1L4A9Z1Z3 1794 aa18.94■□□□□ 0.62
GJB1-202ENST00000374022 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
GJB1-202ENST00000374022 CAMSAP1Q5T5Y3 1602 aa18.93■□□□□ 0.62
GJB1-202ENST00000374022 DHX57Q6P158 1386 aaKnown RBP18.92■□□□□ 0.62
GJB1-202ENST00000374022 E9PCH4 1651 aa18.91■□□□□ 0.62
GJB1-202ENST00000374022 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
GJB1-202ENST00000374022 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
GJB1-202ENST00000374022 EFCAB6Q5THR3 1501 aa18.89■□□□□ 0.62
GJB1-202ENST00000374022 WASHC2CQ9Y4E1 1318 aa18.89■□□□□ 0.61
GJB1-202ENST00000374022 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
GJB1-202ENST00000374022 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
GJB1-202ENST00000374022 ADAMTSL3P82987 1691 aa18.88■□□□□ 0.61
GJB1-202ENST00000374022 MROH2AA6NES4 1674 aa18.88■□□□□ 0.61
GJB1-202ENST00000374022 MADDQ8WXG6 1647 aa18.86■□□□□ 0.61
GJB1-202ENST00000374022 PKD2Q13563 968 aa18.84■□□□□ 0.61
GJB1-202ENST00000374022 RIMS1Q86UR5 1692 aaKnown RBP18.84■□□□□ 0.61
GJB1-202ENST00000374022 CNTLNQ9NXG0 1405 aa18.84■□□□□ 0.61
GJB1-202ENST00000374022 SPHKAPQ2M3C7 1700 aa18.84■□□□□ 0.61
GJB1-202ENST00000374022 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
GJB1-202ENST00000374022 ESF1Q9H501 851 aaKnown RBP18.83■□□□□ 0.6
GJB1-202ENST00000374022 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
GJB1-202ENST00000374022 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
GJB1-202ENST00000374022 NPATQ14207 1427 aa18.82■□□□□ 0.6
GJB1-202ENST00000374022 C3P01024 1663 aa18.81■□□□□ 0.6
GJB1-202ENST00000374022 FOXD1Q16676 465 aa18.81■□□□□ 0.6
GJB1-202ENST00000374022 ARHGAP31Q2M1Z3 1444 aa18.81■□□□□ 0.6
GJB1-202ENST00000374022 PREX1Q8TCU6 1659 aa18.81■□□□□ 0.6
GJB1-202ENST00000374022 ZMYM3Q14202 1370 aa18.77■□□□□ 0.6
GJB1-202ENST00000374022 TRPM2O94759 1503 aa18.76■□□□□ 0.59
GJB1-202ENST00000374022 ANKRD30BQ9BXX2 1392 aa18.75■□□□□ 0.59
GJB1-202ENST00000374022 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
GJB1-202ENST00000374022 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
GJB1-202ENST00000374022 PTPRTO14522 1441 aa18.74■□□□□ 0.59
GJB1-202ENST00000374022 SPATA31D1Q6ZQQ2 1576 aa18.73■□□□□ 0.59
GJB1-202ENST00000374022 ERVK-7P63135 1459 aa18.73■□□□□ 0.59
GJB1-202ENST00000374022 SYNMO15061 1565 aa18.73■□□□□ 0.59
GJB1-202ENST00000374022 NOS1P29475 1434 aa18.72■□□□□ 0.59
GJB1-202ENST00000374022 CLTCL1P53675 1640 aa18.71■□□□□ 0.59
GJB1-202ENST00000374022 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
GJB1-202ENST00000374022 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
GJB1-202ENST00000374022 KIF1BO60333 1816 aa18.69■□□□□ 0.58
GJB1-202ENST00000374022 UGGT1Q9NYU2 1555 aa18.69■□□□□ 0.58
GJB1-202ENST00000374022 CCDC144AA2RUR9 1427 aa18.69■□□□□ 0.58
GJB1-202ENST00000374022 CEBPAP49715 358 aaPredicted RBP18.68■□□□□ 0.58
GJB1-202ENST00000374022 PTPRMP28827 1452 aa18.68■□□□□ 0.58
GJB1-202ENST00000374022 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
GJB1-202ENST00000374022 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
GJB1-202ENST00000374022 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
GJB1-202ENST00000374022 TNRQ92752 1358 aa18.64■□□□□ 0.57
GJB1-202ENST00000374022 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
GJB1-202ENST00000374022 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
GJB1-202ENST00000374022 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
GJB1-202ENST00000374022 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
GJB1-202ENST00000374022 SLC52A1Q9NWF4 448 aa18.61■□□□□ 0.57
GJB1-202ENST00000374022 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
GJB1-202ENST00000374022 NEURL4Q96JN8 1562 aa18.59■□□□□ 0.57
GJB1-202ENST00000374022 NLRP1Q9C000 1473 aa18.58■□□□□ 0.57
GJB1-202ENST00000374022 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.57
GJB1-202ENST00000374022 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
GJB1-202ENST00000374022 IDI1Q13907 227 aa18.58■□□□□ 0.56
GJB1-202ENST00000374022 UBR1Q8IWV7 1749 aa18.57■□□□□ 0.56
GJB1-202ENST00000374022 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
GJB1-202ENST00000374022 SPATA31E1Q6ZUB1 1445 aa18.57■□□□□ 0.56
GJB1-202ENST00000374022 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
GJB1-202ENST00000374022 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
GJB1-202ENST00000374022 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
GJB1-202ENST00000374022 CHGAP10645 457 aaKnown RBP18.53■□□□□ 0.56
GJB1-202ENST00000374022 PPLO60437 1756 aa18.52■□□□□ 0.56
GJB1-202ENST00000374022 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.56
GJB1-202ENST00000374022 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
GJB1-202ENST00000374022 STAG3Q9UJ98 1225 aa18.5■□□□□ 0.55
GJB1-202ENST00000374022 UHRF1BP1Q6BDS2 1440 aa18.49■□□□□ 0.55
GJB1-202ENST00000374022 TIMELESSQ9UNS1 1208 aa18.49■□□□□ 0.55
GJB1-202ENST00000374022 L3MBTL2Q969R5 705 aa18.48■□□□□ 0.55
GJB1-202ENST00000374022 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
GJB1-202ENST00000374022 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
GJB1-202ENST00000374022 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
GJB1-202ENST00000374022 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
GJB1-202ENST00000374022 RPGRIP1LQ68CZ1 1315 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms