RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 HOMER1Q86YM7 354 aa8.61□□□□□ -1.03
CSMD2-206ENST00000373388 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
CSMD2-206ENST00000373388 CENPQQ7L2Z9 268 aaPredicted RBP8.6□□□□□ -1.03
CSMD2-206ENST00000373388 ANKRD20A12PQ8NF67 263 aa8.6□□□□□ -1.03
CSMD2-206ENST00000373388 IFT57Q9NWB7 429 aa8.6□□□□□ -1.03
CSMD2-206ENST00000373388 FRAT1Q92837 279 aaPredicted RBP8.59□□□□□ -1.03
CSMD2-206ENST00000373388 NEUROD2Q15784 382 aa8.59□□□□□ -1.03
CSMD2-206ENST00000373388 ZNF592Q92610 1267 aa8.59□□□□□ -1.03
CSMD2-206ENST00000373388 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
CSMD2-206ENST00000373388 RGL3Q3MIN7 710 aa8.59□□□□□ -1.03
CSMD2-206ENST00000373388 ERLIN1O75477 346 aa8.58□□□□□ -1.04
CSMD2-206ENST00000373388 OS9Q13438 667 aaPredicted RBP8.58□□□□□ -1.04
CSMD2-206ENST00000373388 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
CSMD2-206ENST00000373388 CLGNO14967 610 aa8.58□□□□□ -1.04
CSMD2-206ENST00000373388 GPATCH3Q96I76 525 aa8.58□□□□□ -1.04
CSMD2-206ENST00000373388 RBM28Q9NW13 759 aaKnown RBP8.58□□□□□ -1.04
CSMD2-206ENST00000373388 CHMP5Q9NZZ3 219 aa8.58□□□□□ -1.04
CSMD2-206ENST00000373388 NAT10Q9H0A0 1025 aaKnown RBP8.58□□□□□ -1.04
CSMD2-206ENST00000373388 MTUS2Q5JR59 1369 aa8.57□□□□□ -1.04
CSMD2-206ENST00000373388 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
CSMD2-206ENST00000373388 LETM1O95202 739 aaPredicted RBP8.57□□□□□ -1.04
CSMD2-206ENST00000373388 R3HCC1Q9Y3T6 440 aaKnown RBP8.57□□□□□ -1.04
CSMD2-206ENST00000373388 NUCB2P80303 420 aa8.57□□□□□ -1.04
CSMD2-206ENST00000373388 PAIP2Q9BPZ3 127 aaKnown RBP8.57□□□□□ -1.04
CSMD2-206ENST00000373388 CHMP4AQ9BY43 222 aa8.57□□□□□ -1.04
CSMD2-206ENST00000373388 NAP1L2Q9ULW6 460 aaPredicted RBP8.57□□□□□ -1.04
CSMD2-206ENST00000373388 MBD3O95983 291 aa8.56□□□□□ -1.04
CSMD2-206ENST00000373388 RSF1Q96T23 1441 aaPredicted RBP8.56□□□□□ -1.04
CSMD2-206ENST00000373388 POLR3GO15318 223 aaPredicted RBP8.56□□□□□ -1.04
CSMD2-206ENST00000373388 KIF2AO00139 706 aaPredicted RBP8.56□□□□□ -1.04
CSMD2-206ENST00000373388 PDE4AP27815 886 aa8.56□□□□□ -1.04
CSMD2-206ENST00000373388 TTLL5Q6EMB2 1281 aa8.56□□□□□ -1.04
CSMD2-206ENST00000373388 KTN1Q86UP2 1357 aaKnown RBP8.56□□□□□ -1.04
CSMD2-206ENST00000373388 AAMPQ13685 434 aa8.56□□□□□ -1.04
CSMD2-206ENST00000373388 LUZP1Q86V48 1076 aa8.56□□□□□ -1.04
CSMD2-206ENST00000373388 ROCK2O75116 1388 aaKnown RBP8.56□□□□□ -1.04
CSMD2-206ENST00000373388 KAT6BQ8WYB5 2073 aa8.56□□□□□ -1.04
CSMD2-206ENST00000373388 UQCRHLA0A096LP55 91 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 UQCRHP07919 91 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 TIGD1Q96MW7 591 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 RALBP1Q15311 655 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 NFKBIBQ15653 356 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 GON4LQ3T8J9 2241 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 ESPNB1AK53 854 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 IQCEQ6IPM2 695 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 GOLGA3Q08378 1498 aa8.55□□□□□ -1.04
CSMD2-206ENST00000373388 MFAP1P55081 439 aaKnown RBP8.55□□□□□ -1.04
CSMD2-206ENST00000373388 HDAC5Q9UQL6 1122 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 CCDC9Q9Y3X0 531 aaKnown RBP8.54□□□□□ -1.04
CSMD2-206ENST00000373388 TMCO5BA8MYB1 307 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 KIAA1328Q86T90 577 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 SPATA24Q86W54 205 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 GOLGA6L10A0A0M3HER8 536 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 SIN3AQ96ST3 1273 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 CCDC112Q8NEF3 446 aa8.54□□□□□ -1.04
CSMD2-206ENST00000373388 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
CSMD2-206ENST00000373388 SWAP70Q9UH65 585 aa8.53□□□□□ -1.04
CSMD2-206ENST00000373388 BRD2P25440 801 aaKnown RBP8.53□□□□□ -1.04
CSMD2-206ENST00000373388 RABEP1Q15276 862 aa8.53□□□□□ -1.04
CSMD2-206ENST00000373388 REC8O95072 547 aa8.53□□□□□ -1.04
CSMD2-206ENST00000373388 CT47B1P0C2W7 299 aaPredicted RBP8.52□□□□□ -1.04
CSMD2-206ENST00000373388 EIF3AQ14152 1382 aaKnown RBP8.52□□□□□ -1.04
CSMD2-206ENST00000373388 CEP162Q5TB80 1403 aa8.52□□□□□ -1.04
CSMD2-206ENST00000373388 CLSTN1O94985 981 aa8.52□□□□□ -1.04
CSMD2-206ENST00000373388 CHMP3Q9Y3E7 222 aa8.52□□□□□ -1.04
CSMD2-206ENST00000373388 ZCCHC6Q5VYS8 1495 aaKnown RBP8.52□□□□□ -1.05
CSMD2-206ENST00000373388 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
CSMD2-206ENST00000373388 DYNC1I1O14576 645 aa8.52□□□□□ -1.05
CSMD2-206ENST00000373388 CGNQ9P2M7 1197 aaKnown RBP8.52□□□□□ -1.05
CSMD2-206ENST00000373388 GTPBP4Q9BZE4 634 aaKnown RBP8.52□□□□□ -1.05
CSMD2-206ENST00000373388 CPSF2Q9P2I0 782 aaKnown RBP8.52□□□□□ -1.05
CSMD2-206ENST00000373388 TSPY4P0CV99 314 aa8.52□□□□□ -1.05
CSMD2-206ENST00000373388 TSPY10P0CW01 314 aa8.52□□□□□ -1.05
CSMD2-206ENST00000373388 CGNL1Q0VF96 1302 aa8.51□□□□□ -1.05
CSMD2-206ENST00000373388 FAM184AQ8NB25 1140 aa8.51□□□□□ -1.05
CSMD2-206ENST00000373388 MCM5P33992 734 aa8.51□□□□□ -1.05
CSMD2-206ENST00000373388 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
CSMD2-206ENST00000373388 MICALCLQ6ZW33 695 aa8.51□□□□□ -1.05
CSMD2-206ENST00000373388 GBP2P32456 591 aaPredicted RBP8.51□□□□□ -1.05
CSMD2-206ENST00000373388 TPD52L1Q16890 204 aaPredicted RBP8.5□□□□□ -1.05
CSMD2-206ENST00000373388 ZSCAN30Q86W11 494 aa8.5□□□□□ -1.05
CSMD2-206ENST00000373388 PLCD4Q9BRC7 762 aa8.5□□□□□ -1.05
CSMD2-206ENST00000373388 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
CSMD2-206ENST00000373388 TXLNBQ8N3L3 684 aa8.5□□□□□ -1.05
CSMD2-206ENST00000373388 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
CSMD2-206ENST00000373388 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSMD2-206ENST00000373388 SHTN1A0MZ66 631 aa8.5□□□□□ -1.05
CSMD2-206ENST00000373388 EZRP15311 586 aaKnown RBP8.49□□□□□ -1.05
CSMD2-206ENST00000373388 CCDC91Q7Z6B0 441 aa8.49□□□□□ -1.05
CSMD2-206ENST00000373388 TDO2P48775 406 aa8.49□□□□□ -1.05
CSMD2-206ENST00000373388 CLASRPQ8N2M8 674 aaKnown RBP8.49□□□□□ -1.05
CSMD2-206ENST00000373388 ERLIN2O94905 339 aa8.49□□□□□ -1.05
CSMD2-206ENST00000373388 IVLP07476 585 aa8.49□□□□□ -1.05
CSMD2-206ENST00000373388 SF3A1Q15459 793 aaKnown RBP8.49□□□□□ -1.05
CSMD2-206ENST00000373388 WDR66Q8TBY9 1149 aa8.49□□□□□ -1.05
CSMD2-206ENST00000373388 MCM3P25205 808 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms