RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 UNC13BO14795 1591 aa22.11■■□□□ 1.13
YIPF3-202ENST00000372422 BCORL1Q5H9F3 1711 aa22.08■■□□□ 1.13
YIPF3-202ENST00000372422 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
YIPF3-202ENST00000372422 KANK1Q14678 1352 aa22.08■■□□□ 1.12
YIPF3-202ENST00000372422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.08■■□□□ 1.121e-6■■□□□ 12.8
YIPF3-202ENST00000372422 DEPDC5O75140 1603 aa22.07■■□□□ 1.12
YIPF3-202ENST00000372422 AGLP35573 1532 aa22.06■■□□□ 1.12
YIPF3-202ENST00000372422 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
YIPF3-202ENST00000372422 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
YIPF3-202ENST00000372422 RNF17Q9BXT8 1623 aaKnown RBP22.05■■□□□ 1.12
YIPF3-202ENST00000372422 PRDM15P57071 1507 aaPredicted RBP22.04■■□□□ 1.12
YIPF3-202ENST00000372422 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
YIPF3-202ENST00000372422 PZPP20742 1482 aa22.03■■□□□ 1.12
YIPF3-202ENST00000372422 GGT6Q6P531 493 aa22.03■■□□□ 1.12
YIPF3-202ENST00000372422 FAM135AQ9P2D6 1515 aa22.02■■□□□ 1.12
YIPF3-202ENST00000372422 IQGAP3Q86VI3 1631 aa22.02■■□□□ 1.12
YIPF3-202ENST00000372422 MROH1Q8NDA8 1641 aa21.99■■□□□ 1.11
YIPF3-202ENST00000372422 ARID4BQ4LE39 1312 aaPredicted RBP21.98■■□□□ 1.11
YIPF3-202ENST00000372422 VWDEQ8N2E2 1590 aa21.97■■□□□ 1.11
YIPF3-202ENST00000372422 PPP6R1Q9UPN7 881 aa21.97■■□□□ 1.11
YIPF3-202ENST00000372422 PKD2Q13563 968 aa21.95■■□□□ 1.11
YIPF3-202ENST00000372422 WASHC2CQ9Y4E1 1318 aa21.95■■□□□ 1.1
YIPF3-202ENST00000372422 ZEB1P37275 1124 aaPredicted RBP21.95■■□□□ 1.1
YIPF3-202ENST00000372422 LMTK2Q8IWU2 1503 aa21.94■■□□□ 1.1
YIPF3-202ENST00000372422 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
YIPF3-202ENST00000372422 TET3O43151 1660 aa21.92■■□□□ 1.1
YIPF3-202ENST00000372422 ZC3H13Q5T200 1668 aaKnown RBP21.92■■□□□ 1.1
YIPF3-202ENST00000372422 ABCC3O15438 1527 aa21.9■■□□□ 1.1
YIPF3-202ENST00000372422 MLECQ14165 292 aa21.9■■□□□ 1.1
YIPF3-202ENST00000372422 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
YIPF3-202ENST00000372422 FOXD1Q16676 465 aa21.88■■□□□ 1.09
YIPF3-202ENST00000372422 CEP152O94986 1710 aa21.87■■□□□ 1.09
YIPF3-202ENST00000372422 EFCAB6Q5THR3 1501 aa21.87■■□□□ 1.09
YIPF3-202ENST00000372422 ANKRD30BQ9BXX2 1392 aa21.85■■□□□ 1.09
YIPF3-202ENST00000372422 RPRD2Q5VT52 1461 aaKnown RBP21.85■■□□□ 1.09
YIPF3-202ENST00000372422 CAMSAP1Q5T5Y3 1602 aa21.84■■□□□ 1.09
YIPF3-202ENST00000372422 E9PCH4 1651 aa21.83■■□□□ 1.09
YIPF3-202ENST00000372422 ARHGAP31Q2M1Z3 1444 aa21.82■■□□□ 1.08
YIPF3-202ENST00000372422 CNTLNQ9NXG0 1405 aa21.82■■□□□ 1.08
YIPF3-202ENST00000372422 NPATQ14207 1427 aa21.79■■□□□ 1.08
YIPF3-202ENST00000372422 CLTCQ00610 1675 aaKnown RBP21.79■■□□□ 1.08
YIPF3-202ENST00000372422 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
YIPF3-202ENST00000372422 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
YIPF3-202ENST00000372422 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.07
YIPF3-202ENST00000372422 PTPRTO14522 1441 aa21.77■■□□□ 1.07
YIPF3-202ENST00000372422 SPHKAPQ2M3C7 1700 aa21.75■■□□□ 1.07
YIPF3-202ENST00000372422 TRPM2O94759 1503 aa21.75■■□□□ 1.07
YIPF3-202ENST00000372422 TIMELESSQ9UNS1 1208 aa21.74■■□□□ 1.07
YIPF3-202ENST00000372422 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
YIPF3-202ENST00000372422 ZMYM3Q14202 1370 aa21.73■■□□□ 1.07
YIPF3-202ENST00000372422 MROH2AA6NES4 1674 aa21.73■■□□□ 1.07
YIPF3-202ENST00000372422 FER1L4A9Z1Z3 1794 aa21.72■■□□□ 1.07
YIPF3-202ENST00000372422 TONSLQ96HA7 1378 aa21.72■■□□□ 1.07
YIPF3-202ENST00000372422 NOS1P29475 1434 aa21.7■■□□□ 1.06
YIPF3-202ENST00000372422 ERVK-7P63135 1459 aa21.68■■□□□ 1.06
YIPF3-202ENST00000372422 PREX1Q8TCU6 1659 aa21.67■■□□□ 1.06
YIPF3-202ENST00000372422 ADAMTSL3P82987 1691 aa21.67■■□□□ 1.06
YIPF3-202ENST00000372422 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
YIPF3-202ENST00000372422 SLC52A1Q9NWF4 448 aa21.65■■□□□ 1.06
YIPF3-202ENST00000372422 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
YIPF3-202ENST00000372422 CFAP65Q6ZU64 1925 aaKnown RBP21.64■■□□□ 1.05
YIPF3-202ENST00000372422 FBXO31Q5XUX0 539 aaPredicted RBP21.64■■□□□ 1.05
YIPF3-202ENST00000372422 CLTCL1P53675 1640 aa21.63■■□□□ 1.05
YIPF3-202ENST00000372422 SYNMO15061 1565 aa21.62■■□□□ 1.05
YIPF3-202ENST00000372422 RIMS1Q86UR5 1692 aaKnown RBP21.62■■□□□ 1.05
YIPF3-202ENST00000372422 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
YIPF3-202ENST00000372422 C3P01024 1663 aa21.6■■□□□ 1.05
YIPF3-202ENST00000372422 PIK3C2BO00750 1634 aa21.59■■□□□ 1.05
YIPF3-202ENST00000372422 TNRQ92752 1358 aa21.59■■□□□ 1.05
YIPF3-202ENST00000372422 NEURL4Q96JN8 1562 aa21.58■■□□□ 1.05
YIPF3-202ENST00000372422 CEBPAP49715 358 aaPredicted RBP21.57■■□□□ 1.04
YIPF3-202ENST00000372422 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
YIPF3-202ENST00000372422 KIF1BO60333 1816 aa21.57■■□□□ 1.04
YIPF3-202ENST00000372422 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
YIPF3-202ENST00000372422 CHGAP10645 457 aaKnown RBP21.56■■□□□ 1.04
YIPF3-202ENST00000372422 IDI1Q13907 227 aa21.56■■□□□ 1.04
YIPF3-202ENST00000372422 RGL3Q3MIN7 710 aa21.55■■□□□ 1.04
YIPF3-202ENST00000372422 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
YIPF3-202ENST00000372422 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
YIPF3-202ENST00000372422 ADGRB3O60242 1522 aa21.53■■□□□ 1.04
YIPF3-202ENST00000372422 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
YIPF3-202ENST00000372422 NLRP1Q9C000 1473 aa21.52■■□□□ 1.04
YIPF3-202ENST00000372422 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
YIPF3-202ENST00000372422 PTPRMP28827 1452 aa21.51■■□□□ 1.03
YIPF3-202ENST00000372422 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
YIPF3-202ENST00000372422 DCAF11Q8TEB1 546 aa21.51■■□□□ 1.03
YIPF3-202ENST00000372422 RPGRIP1LQ68CZ1 1315 aa21.48■■□□□ 1.03
YIPF3-202ENST00000372422 TMEM131LA2VDJ0 1609 aa21.46■■□□□ 1.03
YIPF3-202ENST00000372422 KDM2AQ9Y2K7 1162 aa21.45■■□□□ 1.02
YIPF3-202ENST00000372422 KDM5AP29375 1690 aaKnown RBP21.44■■□□□ 1.02
YIPF3-202ENST00000372422 A2ML1A8K2U0 1454 aa21.43■■□□□ 1.02
YIPF3-202ENST00000372422 MYO3AQ8NEV4 1616 aa21.42■■□□□ 1.02
YIPF3-202ENST00000372422 KDM4FA0A1W2PPD8 638 aa21.42■■□□□ 1.02
YIPF3-202ENST00000372422 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
YIPF3-202ENST00000372422 MYOM2P54296 1465 aa21.41■■□□□ 1.02
YIPF3-202ENST00000372422 HDGFP51858 240 aaKnown RBP21.4■■□□□ 1.02
YIPF3-202ENST00000372422 SETD1BQ9UPS6 1966 aaKnown RBP21.4■■□□□ 1.02
YIPF3-202ENST00000372422 VGFO15240 615 aaPredicted RBP21.39■■□□□ 1.01
YIPF3-202ENST00000372422 PRAG1Q86YV5 1406 aa21.38■■□□□ 1.01
YIPF3-202ENST00000372422 UBR1Q8IWV7 1749 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms