RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
CALCOCO2-202ENST00000372317 RNF17Q9BXT8 1623 aaKnown RBP17.1■□□□□ 0.33
CALCOCO2-202ENST00000372317 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
CALCOCO2-202ENST00000372317 DHX57Q6P158 1386 aaKnown RBP17.09■□□□□ 0.33
CALCOCO2-202ENST00000372317 PRDM15P57071 1507 aaPredicted RBP17.09■□□□□ 0.33
CALCOCO2-202ENST00000372317 SIGLEC1Q9BZZ2 1709 aa17.08■□□□□ 0.32
CALCOCO2-202ENST00000372317 PZPP20742 1482 aa17.07■□□□□ 0.32
CALCOCO2-202ENST00000372317 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
CALCOCO2-202ENST00000372317 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
CALCOCO2-202ENST00000372317 AGLP35573 1532 aa17.06■□□□□ 0.32
CALCOCO2-202ENST00000372317 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
CALCOCO2-202ENST00000372317 NUP155O75694 1391 aa17.04■□□□□ 0.32
CALCOCO2-202ENST00000372317 KIF3BO15066 747 aa17.04■□□□□ 0.32
CALCOCO2-202ENST00000372317 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
CALCOCO2-202ENST00000372317 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
CALCOCO2-202ENST00000372317 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
CALCOCO2-202ENST00000372317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.312e-14■■■□□ 15
CALCOCO2-202ENST00000372317 ABCC3O15438 1527 aa16.98■□□□□ 0.31
CALCOCO2-202ENST00000372317 KANK1Q14678 1352 aa16.98■□□□□ 0.31
CALCOCO2-202ENST00000372317 CEP152O94986 1710 aa16.98■□□□□ 0.31
CALCOCO2-202ENST00000372317 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
CALCOCO2-202ENST00000372317 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
CALCOCO2-202ENST00000372317 TET3O43151 1660 aa16.97■□□□□ 0.31
CALCOCO2-202ENST00000372317 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
CALCOCO2-202ENST00000372317 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
CALCOCO2-202ENST00000372317 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.3
CALCOCO2-202ENST00000372317 GGT6Q6P531 493 aa16.95■□□□□ 0.3
CALCOCO2-202ENST00000372317 CAMSAP1Q5T5Y3 1602 aa16.93■□□□□ 0.3
CALCOCO2-202ENST00000372317 E9PCH4 1651 aa16.92■□□□□ 0.3
CALCOCO2-202ENST00000372317 ARID4BQ4LE39 1312 aaPredicted RBP16.92■□□□□ 0.3
CALCOCO2-202ENST00000372317 PKD2Q13563 968 aa16.91■□□□□ 0.3
CALCOCO2-202ENST00000372317 FOXD1Q16676 465 aa16.91■□□□□ 0.3
CALCOCO2-202ENST00000372317 MLECQ14165 292 aa16.9■□□□□ 0.3
CALCOCO2-202ENST00000372317 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
CALCOCO2-202ENST00000372317 CLTCQ00610 1675 aaKnown RBP16.89■□□□□ 0.29
CALCOCO2-202ENST00000372317 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
CALCOCO2-202ENST00000372317 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
CALCOCO2-202ENST00000372317 NPATQ14207 1427 aa16.87■□□□□ 0.29
CALCOCO2-202ENST00000372317 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
CALCOCO2-202ENST00000372317 TRPM2O94759 1503 aa16.85■□□□□ 0.29
CALCOCO2-202ENST00000372317 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
CALCOCO2-202ENST00000372317 PLA2R1Q13018 1463 aa16.84■□□□□ 0.29
CALCOCO2-202ENST00000372317 FER1L4A9Z1Z3 1794 aa16.84■□□□□ 0.29
CALCOCO2-202ENST00000372317 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
CALCOCO2-202ENST00000372317 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
CALCOCO2-202ENST00000372317 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
CALCOCO2-202ENST00000372317 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
CALCOCO2-202ENST00000372317 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
CALCOCO2-202ENST00000372317 PTPRTO14522 1441 aa16.81■□□□□ 0.28
CALCOCO2-202ENST00000372317 SIN3AQ96ST3 1273 aa16.8■□□□□ 0.28
CALCOCO2-202ENST00000372317 ADAMTSL3P82987 1691 aa16.79■□□□□ 0.28
CALCOCO2-202ENST00000372317 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
CALCOCO2-202ENST00000372317 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
CALCOCO2-202ENST00000372317 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
CALCOCO2-202ENST00000372317 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
CALCOCO2-202ENST00000372317 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
CALCOCO2-202ENST00000372317 SYNMO15061 1565 aa16.78■□□□□ 0.28
CALCOCO2-202ENST00000372317 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
CALCOCO2-202ENST00000372317 NOS1P29475 1434 aa16.78■□□□□ 0.28
CALCOCO2-202ENST00000372317 RIMS1Q86UR5 1692 aaKnown RBP16.77■□□□□ 0.28
CALCOCO2-202ENST00000372317 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
CALCOCO2-202ENST00000372317 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
CALCOCO2-202ENST00000372317 ZMYM3Q14202 1370 aa16.75■□□□□ 0.27
CALCOCO2-202ENST00000372317 C3P01024 1663 aa16.74■□□□□ 0.27
CALCOCO2-202ENST00000372317 PIK3C2BO00750 1634 aa16.74■□□□□ 0.27
CALCOCO2-202ENST00000372317 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
CALCOCO2-202ENST00000372317 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
CALCOCO2-202ENST00000372317 FBXO31Q5XUX0 539 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO2-202ENST00000372317 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
CALCOCO2-202ENST00000372317 SPATA31E1Q6ZUB1 1445 aa16.68■□□□□ 0.26
CALCOCO2-202ENST00000372317 CFAP65Q6ZU64 1925 aaKnown RBP16.68■□□□□ 0.26
CALCOCO2-202ENST00000372317 TNRQ92752 1358 aa16.67■□□□□ 0.26
CALCOCO2-202ENST00000372317 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
CALCOCO2-202ENST00000372317 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO2-202ENST00000372317 KIF1BO60333 1816 aa16.64■□□□□ 0.25
CALCOCO2-202ENST00000372317 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
CALCOCO2-202ENST00000372317 PTPRMP28827 1452 aa16.64■□□□□ 0.25
CALCOCO2-202ENST00000372317 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
CALCOCO2-202ENST00000372317 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
CALCOCO2-202ENST00000372317 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
CALCOCO2-202ENST00000372317 TMEM131LA2VDJ0 1609 aa16.62■□□□□ 0.25
CALCOCO2-202ENST00000372317 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
CALCOCO2-202ENST00000372317 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
CALCOCO2-202ENST00000372317 IDI1Q13907 227 aa16.6■□□□□ 0.25
CALCOCO2-202ENST00000372317 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
CALCOCO2-202ENST00000372317 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
CALCOCO2-202ENST00000372317 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
CALCOCO2-202ENST00000372317 A2ML1A8K2U0 1454 aa16.57■□□□□ 0.24
CALCOCO2-202ENST00000372317 MYO5BQ9ULV0 1848 aa16.56■□□□□ 0.24
CALCOCO2-202ENST00000372317 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
CALCOCO2-202ENST00000372317 KDM5AP29375 1690 aaKnown RBP16.56■□□□□ 0.24
CALCOCO2-202ENST00000372317 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
CALCOCO2-202ENST00000372317 NEXMIFQ5QGS0 1516 aa16.56■□□□□ 0.24
CALCOCO2-202ENST00000372317 MYOM2P54296 1465 aa16.56■□□□□ 0.24
CALCOCO2-202ENST00000372317 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
CALCOCO2-202ENST00000372317 PPLO60437 1756 aa16.54■□□□□ 0.24
CALCOCO2-202ENST00000372317 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
CALCOCO2-202ENST00000372317 DCAF11Q8TEB1 546 aa16.54■□□□□ 0.24
CALCOCO2-202ENST00000372317 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
CALCOCO2-202ENST00000372317 PPP1R15AO75807 674 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms