RNA–Protein interactions for RNA: ENST00000371723.4

SDCCAG3-203, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-203ENST00000371723 KIF15Q9NS87 1388 aa40.04■■■■■ 4
SDCCAG3-203ENST00000371723 FAM135AQ9P2D6 1515 aa40.03■■■■■ 4
SDCCAG3-203ENST00000371723 RRP7BPQ9NSQ0 103 aa39.99■■■■□ 3.99
SDCCAG3-203ENST00000371723 KDM5DQ9BY66 1539 aa39.98■■■■□ 3.99
SDCCAG3-203ENST00000371723 CHIC2Q9UKJ5 165 aa39.98■■■■□ 3.99
SDCCAG3-203ENST00000371723 ANKRD30AQ9BXX3 1397 aa39.97■■■■□ 3.99
SDCCAG3-203ENST00000371723 ADGRL2O95490 1459 aa39.97■■■■□ 3.99
SDCCAG3-203ENST00000371723 NPATQ14207 1427 aa39.97■■■■□ 3.99
SDCCAG3-203ENST00000371723 NCOA1Q15788 1441 aa39.96■■■■□ 3.99
SDCCAG3-203ENST00000371723 ERBINQ96RT1 1412 aa39.95■■■■□ 3.99
SDCCAG3-203ENST00000371723 MROH1Q8NDA8 1641 aa39.94■■■■□ 3.99
SDCCAG3-203ENST00000371723 PTPRKQ15262 1439 aa39.91■■■■□ 3.98
SDCCAG3-203ENST00000371723 UHRF1BP1Q6BDS2 1440 aa39.91■■■■□ 3.98
SDCCAG3-203ENST00000371723 HSPA2P54652 639 aa39.9■■■■□ 3.98
SDCCAG3-203ENST00000371723 WASHC2CQ9Y4E1 1318 aa39.9■■■■□ 3.98
SDCCAG3-203ENST00000371723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.89■■■■□ 3.98
SDCCAG3-203ENST00000371723 ZC3H13Q5T200 1668 aaKnown RBP39.89■■■■□ 3.98
SDCCAG3-203ENST00000371723 ABCC3O15438 1527 aa39.85■■■■□ 3.97
SDCCAG3-203ENST00000371723 DEPDC5O75140 1603 aa39.84■■■■□ 3.97
SDCCAG3-203ENST00000371723 CEP152O94986 1710 aa39.82■■■■□ 3.97
SDCCAG3-203ENST00000371723 PRDM15P57071 1507 aaPredicted RBP39.82■■■■□ 3.97
SDCCAG3-203ENST00000371723 PZPP20742 1482 aa39.81■■■■□ 3.96
SDCCAG3-203ENST00000371723 RRBP1Q9P2E9 1410 aaKnown RBP39.8■■■■□ 3.96
SDCCAG3-203ENST00000371723 MYO3AQ8NEV4 1616 aa39.79■■■■□ 3.96
SDCCAG3-203ENST00000371723 ZNF142P52746 1687 aaPredicted RBP39.75■■■■□ 3.95
SDCCAG3-203ENST00000371723 CAMSAP1Q5T5Y3 1602 aa39.74■■■■□ 3.95
SDCCAG3-203ENST00000371723 ROCK1Q13464 1354 aa39.73■■■■□ 3.95
SDCCAG3-203ENST00000371723 FBXO31Q5XUX0 539 aaPredicted RBP39.71■■■■□ 3.95
SDCCAG3-203ENST00000371723 ANKRD50Q9ULJ7 1429 aa39.71■■■■□ 3.95
SDCCAG3-203ENST00000371723 STRCQ7RTU9 1775 aa39.71■■■■□ 3.95
SDCCAG3-203ENST00000371723 CFAP65Q6ZU64 1925 aaKnown RBP39.69■■■■□ 3.94
SDCCAG3-203ENST00000371723 CEP170BQ9Y4F5 1589 aaPredicted RBP39.67■■■■□ 3.94
SDCCAG3-203ENST00000371723 VWDEQ8N2E2 1590 aa39.67■■■■□ 3.94
SDCCAG3-203ENST00000371723 ITGAEP38570 1179 aa39.66■■■■□ 3.94
SDCCAG3-203ENST00000371723 TNRQ92752 1358 aa39.65■■■■□ 3.94
SDCCAG3-203ENST00000371723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.65■■■■□ 3.943e-7■■□□□ 12.6
SDCCAG3-203ENST00000371723 KANK1Q14678 1352 aa39.62■■■■□ 3.93
SDCCAG3-203ENST00000371723 SPATA31D1Q6ZQQ2 1576 aa39.61■■■■□ 3.93
SDCCAG3-203ENST00000371723 LMTK2Q8IWU2 1503 aa39.6■■■■□ 3.93
SDCCAG3-203ENST00000371723 ARHGAP31Q2M1Z3 1444 aa39.59■■■■□ 3.93
SDCCAG3-203ENST00000371723 A2ML1A8K2U0 1454 aa39.59■■■■□ 3.93
SDCCAG3-203ENST00000371723 ERVK-7P63135 1459 aa39.57■■■■□ 3.93
SDCCAG3-203ENST00000371723 UNC13BO14795 1591 aa39.55■■■■□ 3.92
SDCCAG3-203ENST00000371723 NLRP1Q9C000 1473 aa39.52■■■■□ 3.92
SDCCAG3-203ENST00000371723 PLA2R1Q13018 1463 aa39.48■■■■□ 3.91
SDCCAG3-203ENST00000371723 EFCAB6Q5THR3 1501 aa39.47■■■■□ 3.91
SDCCAG3-203ENST00000371723 DMRT2Q9Y5R5 561 aa39.45■■■■□ 3.91
SDCCAG3-203ENST00000371723 TET3O43151 1660 aa39.43■■■■□ 3.9
SDCCAG3-203ENST00000371723 PTPRTO14522 1441 aa39.41■■■■□ 3.9
SDCCAG3-203ENST00000371723 UGGT1Q9NYU2 1555 aa39.4■■■■□ 3.9
SDCCAG3-203ENST00000371723 GCC2Q8IWJ2 1684 aa39.4■■■■□ 3.9
SDCCAG3-203ENST00000371723 IQGAP3Q86VI3 1631 aa39.39■■■■□ 3.9
SDCCAG3-203ENST00000371723 NAIPQ13075 1403 aa39.35■■■■□ 3.89
SDCCAG3-203ENST00000371723 NCKAP5LQ9HCH0 1330 aa39.35■■■■□ 3.89
SDCCAG3-203ENST00000371723 PKD2Q13563 968 aa39.34■■■■□ 3.89
SDCCAG3-203ENST00000371723 POLR1AO95602 1720 aaPredicted RBP39.34■■■■□ 3.89
SDCCAG3-203ENST00000371723 UBR1Q8IWV7 1749 aa39.34■■■■□ 3.89
SDCCAG3-203ENST00000371723 RPRD2Q5VT52 1461 aaKnown RBP39.33■■■■□ 3.89
SDCCAG3-203ENST00000371723 THEMISQ8N1K5 641 aaPredicted RBP39.32■■■■□ 3.89
SDCCAG3-203ENST00000371723 NOS1P29475 1434 aa39.31■■■■□ 3.88
SDCCAG3-203ENST00000371723 SYNMO15061 1565 aa39.31■■■■□ 3.88
SDCCAG3-203ENST00000371723 E9PCH4 1651 aa39.29■■■■□ 3.88
SDCCAG3-203ENST00000371723 NUP155O75694 1391 aa39.28■■■■□ 3.88
SDCCAG3-203ENST00000371723 HFM1A2PYH4 1435 aa39.28■■■■□ 3.88
SDCCAG3-203ENST00000371723 PIK3C2BO00750 1634 aa39.27■■■■□ 3.88
SDCCAG3-203ENST00000371723 NEURL4Q96JN8 1562 aa39.24■■■■□ 3.87
SDCCAG3-203ENST00000371723 KDM5AP29375 1690 aaKnown RBP39.22■■■■□ 3.87
SDCCAG3-203ENST00000371723 IDI1Q13907 227 aa39.18■■■■□ 3.86
SDCCAG3-203ENST00000371723 ANKLE2Q86XL3 938 aa39.18■■■■□ 3.86
SDCCAG3-203ENST00000371723 SLC52A1Q9NWF4 448 aa39.14■■■■□ 3.86
SDCCAG3-203ENST00000371723 SLIT1O75093 1534 aa39.13■■■■□ 3.85
SDCCAG3-203ENST00000371723 MED14O60244 1454 aa39.12■■■■□ 3.85
SDCCAG3-203ENST00000371723 ARHGAP23Q9P227 1491 aa39.12■■■■□ 3.85
SDCCAG3-203ENST00000371723 LTBP4Q8N2S1 1624 aa39.09■■■■□ 3.85
SDCCAG3-203ENST00000371723 ADGRB3O60242 1522 aa39.09■■■■□ 3.85
SDCCAG3-203ENST00000371723 MYO5BQ9ULV0 1848 aa39.07■■■■□ 3.84
SDCCAG3-203ENST00000371723 IQGAP1P46940 1657 aa39.06■■■■□ 3.84
SDCCAG3-203ENST00000371723 CERKQ8TCT0 537 aa39.06■■■■□ 3.84
SDCCAG3-203ENST00000371723 STAG3Q9UJ98 1225 aa39.05■■■■□ 3.84
SDCCAG3-203ENST00000371723 NPHP4O75161 1426 aaPredicted RBP39.05■■■■□ 3.84
SDCCAG3-203ENST00000371723 SPHKAPQ2M3C7 1700 aa39.03■■■■□ 3.84
SDCCAG3-203ENST00000371723 TMEM2Q9UHN6 1383 aa39.03■■■■□ 3.84
SDCCAG3-203ENST00000371723 SCAF11Q99590 1463 aaKnown RBP39.03■■■■□ 3.84
SDCCAG3-203ENST00000371723 LTKP29376 864 aa39■■■■□ 3.83
SDCCAG3-203ENST00000371723 ILDR1Q86SU0 546 aaPredicted RBP39■■■■□ 3.83
SDCCAG3-203ENST00000371723 TMEM131LA2VDJ0 1609 aa39■■■■□ 3.83
SDCCAG3-203ENST00000371723 ZNF335Q9H4Z2 1342 aaPredicted RBP38.98■■■■□ 3.83
SDCCAG3-203ENST00000371723 TXNDC2Q86VQ3 553 aa38.97■■■■□ 3.83
SDCCAG3-203ENST00000371723 TRIM52Q96A61 297 aa38.97■■■■□ 3.83
SDCCAG3-203ENST00000371723 FBXO41Q8TF61 875 aa38.93■■■■□ 3.82
SDCCAG3-203ENST00000371723 EID1Q9Y6B2 187 aa38.93■■■■□ 3.82
SDCCAG3-203ENST00000371723 SETD5Q9C0A6 1442 aa38.86■■■■□ 3.81
SDCCAG3-203ENST00000371723 ZFYVE9O95405 1425 aa38.85■■■■□ 3.81
SDCCAG3-203ENST00000371723 TRPM2O94759 1503 aa38.84■■■■□ 3.81
SDCCAG3-203ENST00000371723 SLC4A1APQ9BWU0 796 aaKnown RBP38.84■■■■□ 3.81
SDCCAG3-203ENST00000371723 IQSEC2Q5JU85 1478 aa38.83■■■■□ 3.81
SDCCAG3-203ENST00000371723 CLTCL1P53675 1640 aa38.81■■■■□ 3.8
SDCCAG3-203ENST00000371723 CHGAP10645 457 aaKnown RBP38.8■■■■□ 3.8
SDCCAG3-203ENST00000371723 STRCP1A6NGW2 1772 aa38.8■■■■□ 3.8
SDCCAG3-203ENST00000371723 RIMS2Q9UQ26 1411 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms