RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ZNF644Q9H582 1327 aaPredicted RBP24.15■■□□□ 1.46
RPF1-202ENST00000370656 MBD5Q9P267 1494 aa24.15■■□□□ 1.46
RPF1-202ENST00000370656 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
RPF1-202ENST00000370656 DHX29Q7Z478 1369 aaKnown RBP24.14■■□□□ 1.45
RPF1-202ENST00000370656 POLR1AO95602 1720 aaPredicted RBP24.13■■□□□ 1.45
RPF1-202ENST00000370656 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
RPF1-202ENST00000370656 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
RPF1-202ENST00000370656 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
RPF1-202ENST00000370656 FAM135AQ9P2D6 1515 aa24.1■■□□□ 1.45
RPF1-202ENST00000370656 KIF3BO15066 747 aa24.09■■□□□ 1.45
RPF1-202ENST00000370656 TNRQ92752 1358 aa24.08■■□□□ 1.45
RPF1-202ENST00000370656 KDM5DQ9BY66 1539 aa24.08■■□□□ 1.45
RPF1-202ENST00000370656 CCDC141Q6ZP82 1450 aa24.07■■□□□ 1.44
RPF1-202ENST00000370656 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
RPF1-202ENST00000370656 CPS1P31327 1500 aa24.06■■□□□ 1.44
RPF1-202ENST00000370656 PZPP20742 1482 aa24.06■■□□□ 1.44
RPF1-202ENST00000370656 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
RPF1-202ENST00000370656 PIP4K2BP78356 416 aa24.04■■□□□ 1.44
RPF1-202ENST00000370656 TOM1O60784 492 aa24.03■■□□□ 1.44
RPF1-202ENST00000370656 HSPA1LP34931 641 aa24.03■■□□□ 1.44
RPF1-202ENST00000370656 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
RPF1-202ENST00000370656 CAMSAP2Q08AD1 1489 aa24.02■■□□□ 1.44
RPF1-202ENST00000370656 ANKLE2Q86XL3 938 aa24.02■■□□□ 1.44
RPF1-202ENST00000370656 NEURL4Q96JN8 1562 aa24.02■■□□□ 1.44
RPF1-202ENST00000370656 SHANK2Q9UPX8 1470 aa24.01■■□□□ 1.43
RPF1-202ENST00000370656 THEMISQ8N1K5 641 aaPredicted RBP24.01■■□□□ 1.43
RPF1-202ENST00000370656 NCOA2Q15596 1464 aa24■■□□□ 1.43
RPF1-202ENST00000370656 NLRP1Q9C000 1473 aa23.99■■□□□ 1.43
RPF1-202ENST00000370656 TSPY4P0CV99 314 aa23.98■■□□□ 1.43
RPF1-202ENST00000370656 TSPY10P0CW01 314 aa23.98■■□□□ 1.43
RPF1-202ENST00000370656 ADRA2BP18089 450 aa23.97■■□□□ 1.43
RPF1-202ENST00000370656 MIA2Q96PC5 1412 aa23.97■■□□□ 1.43
RPF1-202ENST00000370656 ARHGEF5Q12774 1597 aa23.96■■□□□ 1.43
RPF1-202ENST00000370656 UGGT1Q9NYU2 1555 aa23.96■■□□□ 1.43
RPF1-202ENST00000370656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.96■■□□□ 1.43
RPF1-202ENST00000370656 DEPDC5O75140 1603 aa23.95■■□□□ 1.43
RPF1-202ENST00000370656 MED14O60244 1454 aa23.92■■□□□ 1.42
RPF1-202ENST00000370656 NPHP4O75161 1426 aaPredicted RBP23.92■■□□□ 1.42
RPF1-202ENST00000370656 VWDEQ8N2E2 1590 aa23.91■■□□□ 1.42
RPF1-202ENST00000370656 ZC3H13Q5T200 1668 aaKnown RBP23.91■■□□□ 1.42
RPF1-202ENST00000370656 IQGAP1P46940 1657 aa23.9■■□□□ 1.42
RPF1-202ENST00000370656 RNF17Q9BXT8 1623 aaKnown RBP23.89■■□□□ 1.42
RPF1-202ENST00000370656 EIF2AK4Q9P2K8 1649 aaKnown RBP23.85■■□□□ 1.41
RPF1-202ENST00000370656 MAST1Q9Y2H9 1570 aa23.85■■□□□ 1.41
RPF1-202ENST00000370656 ABCC3O15438 1527 aa23.84■■□□□ 1.41
RPF1-202ENST00000370656 ALKQ9UM73 1620 aa23.84■■□□□ 1.41
RPF1-202ENST00000370656 CFAP65Q6ZU64 1925 aaKnown RBP23.82■■□□□ 1.4
RPF1-202ENST00000370656 SYNMO15061 1565 aa23.81■■□□□ 1.4
RPF1-202ENST00000370656 ERVK-7P63135 1459 aa23.8■■□□□ 1.4
RPF1-202ENST00000370656 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
RPF1-202ENST00000370656 STRCP1A6NGW2 1772 aa23.79■■□□□ 1.4
RPF1-202ENST00000370656 CEP152O94986 1710 aa23.78■■□□□ 1.4
RPF1-202ENST00000370656 UBR1Q8IWV7 1749 aa23.76■■□□□ 1.39
RPF1-202ENST00000370656 LRRC7Q96NW7 1537 aa23.76■■□□□ 1.39
RPF1-202ENST00000370656 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
RPF1-202ENST00000370656 MROH1Q8NDA8 1641 aa23.74■■□□□ 1.39
RPF1-202ENST00000370656 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
RPF1-202ENST00000370656 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
RPF1-202ENST00000370656 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
RPF1-202ENST00000370656 MAP3K1Q13233 1512 aa23.7■■□□□ 1.38
RPF1-202ENST00000370656 TXNDC2Q86VQ3 553 aa23.67■■□□□ 1.38
RPF1-202ENST00000370656 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
RPF1-202ENST00000370656 SLIT1O75093 1534 aa23.67■■□□□ 1.38
RPF1-202ENST00000370656 ARHGAP31Q2M1Z3 1444 aa23.67■■□□□ 1.38
RPF1-202ENST00000370656 ARHGAP23Q9P227 1491 aa23.66■■□□□ 1.38
RPF1-202ENST00000370656 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
RPF1-202ENST00000370656 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
RPF1-202ENST00000370656 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.37
RPF1-202ENST00000370656 ERBINQ96RT1 1412 aa23.64■■□□□ 1.37
RPF1-202ENST00000370656 LTKP29376 864 aa23.63■■□□□ 1.37
RPF1-202ENST00000370656 CROCC2H7BZ55 1655 aa23.63■■□□□ 1.37
RPF1-202ENST00000370656 XIRP1Q702N8 1843 aaKnown RBP23.61■■□□□ 1.37
RPF1-202ENST00000370656 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
RPF1-202ENST00000370656 STAG3Q9UJ98 1225 aa23.61■■□□□ 1.37
RPF1-202ENST00000370656 KANK1Q14678 1352 aa23.61■■□□□ 1.37
RPF1-202ENST00000370656 PIK3C2BO00750 1634 aa23.6■■□□□ 1.37
RPF1-202ENST00000370656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
RPF1-202ENST00000370656 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
RPF1-202ENST00000370656 KDM5AP29375 1690 aaKnown RBP23.58■■□□□ 1.37
RPF1-202ENST00000370656 TMEM2Q9UHN6 1383 aa23.57■■□□□ 1.36
RPF1-202ENST00000370656 PTPN23Q9H3S7 1636 aa23.57■■□□□ 1.36
RPF1-202ENST00000370656 ABCC5O15440 1437 aa23.56■■□□□ 1.36
RPF1-202ENST00000370656 RGS17Q9UGC6 210 aaPredicted RBP23.55■■□□□ 1.36
RPF1-202ENST00000370656 APLP2Q06481 763 aa23.54■■□□□ 1.36
RPF1-202ENST00000370656 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
RPF1-202ENST00000370656 FAM135BQ49AJ0 1406 aa23.52■■□□□ 1.36
RPF1-202ENST00000370656 DAPK1P53355 1430 aa23.51■■□□□ 1.35
RPF1-202ENST00000370656 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
RPF1-202ENST00000370656 TMEM94Q12767 1356 aa23.49■■□□□ 1.35
RPF1-202ENST00000370656 ANKRD30AQ9BXX3 1397 aa23.49■■□□□ 1.35
RPF1-202ENST00000370656 KCNA6P17658 529 aa23.48■■□□□ 1.35
RPF1-202ENST00000370656 IDI1Q13907 227 aa23.48■■□□□ 1.35
RPF1-202ENST00000370656 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
RPF1-202ENST00000370656 PROSER2Q86WR7 435 aaPredicted RBP23.46■■□□□ 1.35
RPF1-202ENST00000370656 ROBO1Q9Y6N7 1651 aa23.45■■□□□ 1.34
RPF1-202ENST00000370656 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
RPF1-202ENST00000370656 TET3O43151 1660 aa23.44■■□□□ 1.34
RPF1-202ENST00000370656 SLC26A8Q96RN1 970 aa23.44■■□□□ 1.34
RPF1-202ENST00000370656 ADGRB3O60242 1522 aa23.43■■□□□ 1.34
RPF1-202ENST00000370656 POTEAQ6S8J7 498 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms