RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 AGLP35573 1532 aa26.24■■□□□ 1.79
LINC01558-201ENST00000366822 RAB3GAP2Q9H2M9 1393 aa26.23■■□□□ 1.79
LINC01558-201ENST00000366822 EIF2AK4Q9P2K8 1649 aaKnown RBP26.23■■□□□ 1.79
LINC01558-201ENST00000366822 PTPRMP28827 1452 aa26.22■■□□□ 1.79
LINC01558-201ENST00000366822 HRCP23327 699 aa26.21■■□□□ 1.79
LINC01558-201ENST00000366822 KIF3BO15066 747 aa26.19■■□□□ 1.78
LINC01558-201ENST00000366822 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.78
LINC01558-201ENST00000366822 RNF17Q9BXT8 1623 aaKnown RBP26.14■■□□□ 1.77
LINC01558-201ENST00000366822 UNC13BO14795 1591 aa26.12■■□□□ 1.77
LINC01558-201ENST00000366822 DEPDC5O75140 1603 aa26.12■■□□□ 1.77
LINC01558-201ENST00000366822 MROH1Q8NDA8 1641 aa26.1■■□□□ 1.77
LINC01558-201ENST00000366822 GGT6Q6P531 493 aa26.1■■□□□ 1.77
LINC01558-201ENST00000366822 PRDM15P57071 1507 aaPredicted RBP26.09■■□□□ 1.77
LINC01558-201ENST00000366822 MLECQ14165 292 aa26.08■■□□□ 1.77
LINC01558-201ENST00000366822 KDM5DQ9BY66 1539 aa26.07■■□□□ 1.76
LINC01558-201ENST00000366822 NUP155O75694 1391 aa26.07■■□□□ 1.76
LINC01558-201ENST00000366822 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
LINC01558-201ENST00000366822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.06■■□□□ 1.76
LINC01558-201ENST00000366822 VWDEQ8N2E2 1590 aa26.06■■□□□ 1.76
LINC01558-201ENST00000366822 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
LINC01558-201ENST00000366822 KANK1Q14678 1352 aa26.04■■□□□ 1.76
LINC01558-201ENST00000366822 MROH2AA6NES4 1674 aa26.03■■□□□ 1.76
LINC01558-201ENST00000366822 C3P01024 1663 aa26.03■■□□□ 1.76
LINC01558-201ENST00000366822 FAM135AQ9P2D6 1515 aa26.01■■□□□ 1.75
LINC01558-201ENST00000366822 IQGAP3Q86VI3 1631 aa26■■□□□ 1.75
LINC01558-201ENST00000366822 PLPPR3Q6T4P5 718 aa26■■□□□ 1.75
LINC01558-201ENST00000366822 LMTK2Q8IWU2 1503 aa25.99■■□□□ 1.75
LINC01558-201ENST00000366822 PZPP20742 1482 aa25.99■■□□□ 1.75
LINC01558-201ENST00000366822 PREX1Q8TCU6 1659 aa25.98■■□□□ 1.75
LINC01558-201ENST00000366822 ABCC3O15438 1527 aa25.98■■□□□ 1.75
LINC01558-201ENST00000366822 CLTCQ00610 1675 aaKnown RBP25.97■■□□□ 1.75
LINC01558-201ENST00000366822 WASHC2CQ9Y4E1 1318 aa25.97■■□□□ 1.75
LINC01558-201ENST00000366822 MPHOSPH9Q99550 1183 aa25.95■■□□□ 1.74
LINC01558-201ENST00000366822 ZC3H13Q5T200 1668 aaKnown RBP25.95■■□□□ 1.74
LINC01558-201ENST00000366822 LMTK3Q96Q04 1460 aa25.94■■□□□ 1.74
LINC01558-201ENST00000366822 SLC4A1APQ9BWU0 796 aaKnown RBP25.94■■□□□ 1.74
LINC01558-201ENST00000366822 CNTLNQ9NXG0 1405 aa25.92■■□□□ 1.74
LINC01558-201ENST00000366822 SETD1BQ9UPS6 1966 aaKnown RBP25.92■■□□□ 1.74
LINC01558-201ENST00000366822 CEP152O94986 1710 aa25.91■■□□□ 1.74
LINC01558-201ENST00000366822 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
LINC01558-201ENST00000366822 TET3O43151 1660 aa25.9■■□□□ 1.74
LINC01558-201ENST00000366822 DHX57Q6P158 1386 aaKnown RBP25.9■■□□□ 1.74
LINC01558-201ENST00000366822 EFCAB6Q5THR3 1501 aa25.88■■□□□ 1.73
LINC01558-201ENST00000366822 PKD2Q13563 968 aa25.87■■□□□ 1.73
LINC01558-201ENST00000366822 CAMSAP1Q5T5Y3 1602 aa25.87■■□□□ 1.73
LINC01558-201ENST00000366822 ARHGAP31Q2M1Z3 1444 aa25.87■■□□□ 1.73
LINC01558-201ENST00000366822 ZMYM3Q14202 1370 aa25.84■■□□□ 1.73
LINC01558-201ENST00000366822 NPATQ14207 1427 aa25.84■■□□□ 1.73
LINC01558-201ENST00000366822 RPRD2Q5VT52 1461 aaKnown RBP25.82■■□□□ 1.72
LINC01558-201ENST00000366822 E9PCH4 1651 aa25.82■■□□□ 1.72
LINC01558-201ENST00000366822 CEBPAP49715 358 aaPredicted RBP25.79■■□□□ 1.72
LINC01558-201ENST00000366822 FOXD1Q16676 465 aa25.79■■□□□ 1.72
LINC01558-201ENST00000366822 ZNF142P52746 1687 aaPredicted RBP25.76■■□□□ 1.71
LINC01558-201ENST00000366822 MYO3AQ8NEV4 1616 aa25.75■■□□□ 1.71
LINC01558-201ENST00000366822 PTPRTO14522 1441 aa25.75■■□□□ 1.71
LINC01558-201ENST00000366822 NOS1P29475 1434 aa25.74■■□□□ 1.71
LINC01558-201ENST00000366822 UHRF1BP1Q6BDS2 1440 aa25.73■■□□□ 1.71
LINC01558-201ENST00000366822 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
LINC01558-201ENST00000366822 ERVK-7P63135 1459 aa25.72■■□□□ 1.71
LINC01558-201ENST00000366822 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
LINC01558-201ENST00000366822 FBXO31Q5XUX0 539 aaPredicted RBP25.72■■□□□ 1.71
LINC01558-201ENST00000366822 SPATA31D1Q6ZQQ2 1576 aa25.71■■□□□ 1.71
LINC01558-201ENST00000366822 HSPA2P54652 639 aa25.71■■□□□ 1.71
LINC01558-201ENST00000366822 CCER1Q8TC90 406 aaPredicted RBP25.7■■□□□ 1.7
LINC01558-201ENST00000366822 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
LINC01558-201ENST00000366822 TRPM2O94759 1503 aa25.68■■□□□ 1.7
LINC01558-201ENST00000366822 CLSPNQ9HAW4 1339 aa25.67■■□□□ 1.7
LINC01558-201ENST00000366822 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
LINC01558-201ENST00000366822 SYNMO15061 1565 aa25.65■■□□□ 1.7
LINC01558-201ENST00000366822 TNRQ92752 1358 aa25.64■■□□□ 1.69
LINC01558-201ENST00000366822 CEP170BQ9Y4F5 1589 aaPredicted RBP25.64■■□□□ 1.69
LINC01558-201ENST00000366822 CFAP65Q6ZU64 1925 aaKnown RBP25.61■■□□□ 1.69
LINC01558-201ENST00000366822 SLC52A1Q9NWF4 448 aa25.61■■□□□ 1.69
LINC01558-201ENST00000366822 CCDC144AA2RUR9 1427 aa25.61■■□□□ 1.69
LINC01558-201ENST00000366822 UGGT1Q9NYU2 1555 aa25.59■■□□□ 1.69
LINC01558-201ENST00000366822 PIK3C2BO00750 1634 aa25.58■■□□□ 1.69
LINC01558-201ENST00000366822 CLTCL1P53675 1640 aa25.58■■□□□ 1.69
LINC01558-201ENST00000366822 IDI1Q13907 227 aa25.57■■□□□ 1.68
LINC01558-201ENST00000366822 SIN3AQ96ST3 1273 aa25.57■■□□□ 1.68
LINC01558-201ENST00000366822 ILDR1Q86SU0 546 aaPredicted RBP25.55■■□□□ 1.68
LINC01558-201ENST00000366822 NLRP1Q9C000 1473 aa25.54■■□□□ 1.68
LINC01558-201ENST00000366822 A2ML1A8K2U0 1454 aa25.52■■□□□ 1.68
LINC01558-201ENST00000366822 POLR1AO95602 1720 aaPredicted RBP25.5■■□□□ 1.67
LINC01558-201ENST00000366822 NEUROD1Q13562 356 aa25.49■■□□□ 1.67
LINC01558-201ENST00000366822 SPATA31E1Q6ZUB1 1445 aa25.48■■□□□ 1.67
LINC01558-201ENST00000366822 DMRT2Q9Y5R5 561 aa25.48■■□□□ 1.67
LINC01558-201ENST00000366822 NEURL4Q96JN8 1562 aa25.47■■□□□ 1.67
LINC01558-201ENST00000366822 ADGRB3O60242 1522 aa25.47■■□□□ 1.67
LINC01558-201ENST00000366822 TMEM131LA2VDJ0 1609 aa25.45■■□□□ 1.66
LINC01558-201ENST00000366822 CHGAP10645 457 aaKnown RBP25.44■■□□□ 1.66
LINC01558-201ENST00000366822 KIF1BO60333 1816 aa25.44■■□□□ 1.66
LINC01558-201ENST00000366822 KDM5AP29375 1690 aaKnown RBP25.42■■□□□ 1.66
LINC01558-201ENST00000366822 STAG3Q9UJ98 1225 aa25.42■■□□□ 1.66
LINC01558-201ENST00000366822 UBR1Q8IWV7 1749 aa25.42■■□□□ 1.66
LINC01558-201ENST00000366822 RGL3Q3MIN7 710 aa25.38■■□□□ 1.65
LINC01558-201ENST00000366822 FBXO41Q8TF61 875 aa25.38■■□□□ 1.65
LINC01558-201ENST00000366822 TIMELESSQ9UNS1 1208 aa25.38■■□□□ 1.65
LINC01558-201ENST00000366822 TONSLQ96HA7 1378 aa25.37■■□□□ 1.65
LINC01558-201ENST00000366822 THEMISQ8N1K5 641 aaPredicted RBP25.36■■□□□ 1.65
LINC01558-201ENST00000366822 RPGRIP1LQ68CZ1 1315 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms