RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 RRP7BPQ9NSQ0 103 aa22.8■■□□□ 1.24
TPM2-202ENST00000360958 ESF1Q9H501 851 aaKnown RBP22.79■■□□□ 1.24
TPM2-202ENST00000360958 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
TPM2-202ENST00000360958 GGT6Q6P531 493 aa22.78■■□□□ 1.24
TPM2-202ENST00000360958 KDM5DQ9BY66 1539 aa22.77■■□□□ 1.24
TPM2-202ENST00000360958 DEPDC5O75140 1603 aa22.77■■□□□ 1.24
TPM2-202ENST00000360958 MROH1Q8NDA8 1641 aa22.77■■□□□ 1.24
TPM2-202ENST00000360958 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
TPM2-202ENST00000360958 C3P01024 1663 aa22.75■■□□□ 1.23
TPM2-202ENST00000360958 ZC3H13Q5T200 1668 aaKnown RBP22.74■■□□□ 1.23
TPM2-202ENST00000360958 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
TPM2-202ENST00000360958 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
TPM2-202ENST00000360958 ZMYM3Q14202 1370 aa22.73■■□□□ 1.23
TPM2-202ENST00000360958 NPATQ14207 1427 aa22.73■■□□□ 1.23
TPM2-202ENST00000360958 ABCC3O15438 1527 aa22.7■■□□□ 1.22
TPM2-202ENST00000360958 VWDEQ8N2E2 1590 aa22.69■■□□□ 1.22
TPM2-202ENST00000360958 WASHC2CQ9Y4E1 1318 aa22.69■■□□□ 1.22
TPM2-202ENST00000360958 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
TPM2-202ENST00000360958 LMTK2Q8IWU2 1503 aa22.67■■□□□ 1.22
TPM2-202ENST00000360958 PZPP20742 1482 aa22.66■■□□□ 1.22
TPM2-202ENST00000360958 CEBPAP49715 358 aaPredicted RBP22.66■■□□□ 1.22
TPM2-202ENST00000360958 ITGAEP38570 1179 aa22.65■■□□□ 1.22
TPM2-202ENST00000360958 KANK1Q14678 1352 aa22.64■■□□□ 1.22
TPM2-202ENST00000360958 PREX1Q8TCU6 1659 aa22.64■■□□□ 1.21
TPM2-202ENST00000360958 ARHGAP31Q2M1Z3 1444 aa22.64■■□□□ 1.21
TPM2-202ENST00000360958 UNC13BO14795 1591 aa22.63■■□□□ 1.21
TPM2-202ENST00000360958 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
TPM2-202ENST00000360958 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
TPM2-202ENST00000360958 NAIPQ13075 1403 aa22.62■■□□□ 1.21
TPM2-202ENST00000360958 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
TPM2-202ENST00000360958 CAMSAP1Q5T5Y3 1602 aa22.6■■□□□ 1.21
TPM2-202ENST00000360958 CEP152O94986 1710 aa22.6■■□□□ 1.21
TPM2-202ENST00000360958 UHRF1BP1Q6BDS2 1440 aa22.58■■□□□ 1.21
TPM2-202ENST00000360958 SPATA31D1Q6ZQQ2 1576 aa22.55■■□□□ 1.2
TPM2-202ENST00000360958 EFCAB6Q5THR3 1501 aa22.55■■□□□ 1.2
TPM2-202ENST00000360958 IQGAP3Q86VI3 1631 aa22.54■■□□□ 1.2
TPM2-202ENST00000360958 PLPPR3Q6T4P5 718 aa22.54■■□□□ 1.2
TPM2-202ENST00000360958 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
TPM2-202ENST00000360958 ZNF142P52746 1687 aaPredicted RBP22.53■■□□□ 1.2
TPM2-202ENST00000360958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.28e-7■■■■□ 23.1
TPM2-202ENST00000360958 ERVK-7P63135 1459 aa22.53■■□□□ 1.2
TPM2-202ENST00000360958 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
TPM2-202ENST00000360958 TET3O43151 1660 aa22.52■■□□□ 1.2
TPM2-202ENST00000360958 TNRQ92752 1358 aa22.51■■□□□ 1.19
TPM2-202ENST00000360958 NLRP1Q9C000 1473 aa22.5■■□□□ 1.19
TPM2-202ENST00000360958 FBXO31Q5XUX0 539 aaPredicted RBP22.49■■□□□ 1.19
TPM2-202ENST00000360958 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
TPM2-202ENST00000360958 A2ML1A8K2U0 1454 aa22.47■■□□□ 1.19
TPM2-202ENST00000360958 CEP170BQ9Y4F5 1589 aaPredicted RBP22.47■■□□□ 1.19
TPM2-202ENST00000360958 NUP155O75694 1391 aa22.47■■□□□ 1.19
TPM2-202ENST00000360958 NOS1P29475 1434 aa22.45■■□□□ 1.18
TPM2-202ENST00000360958 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
TPM2-202ENST00000360958 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
TPM2-202ENST00000360958 E9PCH4 1651 aa22.39■■□□□ 1.18
TPM2-202ENST00000360958 HSPA2P54652 639 aa22.39■■□□□ 1.17
TPM2-202ENST00000360958 SYNMO15061 1565 aa22.38■■□□□ 1.17
TPM2-202ENST00000360958 KDM5AP29375 1690 aaKnown RBP22.38■■□□□ 1.17
TPM2-202ENST00000360958 UGGT1Q9NYU2 1555 aa22.36■■□□□ 1.17
TPM2-202ENST00000360958 SLC52A1Q9NWF4 448 aa22.35■■□□□ 1.17
TPM2-202ENST00000360958 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
TPM2-202ENST00000360958 HRCP23327 699 aa22.34■■□□□ 1.17
TPM2-202ENST00000360958 STRCQ7RTU9 1775 aa22.34■■□□□ 1.17
TPM2-202ENST00000360958 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
TPM2-202ENST00000360958 PTPRTO14522 1441 aa22.32■■□□□ 1.16
TPM2-202ENST00000360958 PIK3C2BO00750 1634 aa22.32■■□□□ 1.16
TPM2-202ENST00000360958 UBR1Q8IWV7 1749 aa22.32■■□□□ 1.16
TPM2-202ENST00000360958 PKD2Q13563 968 aa22.3■■□□□ 1.16
TPM2-202ENST00000360958 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
TPM2-202ENST00000360958 RAB3GAP2Q9H2M9 1393 aa22.29■■□□□ 1.16
TPM2-202ENST00000360958 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
TPM2-202ENST00000360958 IDI1Q13907 227 aa22.28■■□□□ 1.16
TPM2-202ENST00000360958 SPHKAPQ2M3C7 1700 aa22.28■■□□□ 1.16
TPM2-202ENST00000360958 SLIT1O75093 1534 aa22.27■■□□□ 1.16
TPM2-202ENST00000360958 ARHGAP23Q9P227 1491 aa22.27■■□□□ 1.16
TPM2-202ENST00000360958 ADGRB3O60242 1522 aa22.26■■□□□ 1.15
TPM2-202ENST00000360958 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
TPM2-202ENST00000360958 TRPM2O94759 1503 aa22.25■■□□□ 1.15
TPM2-202ENST00000360958 POLR1AO95602 1720 aaPredicted RBP22.23■■□□□ 1.15
TPM2-202ENST00000360958 MED14O60244 1454 aa22.23■■□□□ 1.15
TPM2-202ENST00000360958 TMEM131LA2VDJ0 1609 aa22.21■■□□□ 1.15
TPM2-202ENST00000360958 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
TPM2-202ENST00000360958 MPHOSPH9Q99550 1183 aa22.21■■□□□ 1.15
TPM2-202ENST00000360958 TMEM2Q9UHN6 1383 aa22.21■■□□□ 1.15
TPM2-202ENST00000360958 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
TPM2-202ENST00000360958 NCKAP5LQ9HCH0 1330 aa22.18■■□□□ 1.14
TPM2-202ENST00000360958 SCAF11Q99590 1463 aaKnown RBP22.17■■□□□ 1.14
TPM2-202ENST00000360958 STAG3Q9UJ98 1225 aa22.17■■□□□ 1.14
TPM2-202ENST00000360958 TRIM26Q12899 539 aaPredicted RBP22.16■■□□□ 1.14
TPM2-202ENST00000360958 CLTCL1P53675 1640 aa22.15■■□□□ 1.14
TPM2-202ENST00000360958 ZFYVE9O95405 1425 aa22.14■■□□□ 1.13
TPM2-202ENST00000360958 EID1Q9Y6B2 187 aa22.13■■□□□ 1.13
TPM2-202ENST00000360958 NPHP4O75161 1426 aaPredicted RBP22.13■■□□□ 1.13
TPM2-202ENST00000360958 MYO5BQ9ULV0 1848 aa22.11■■□□□ 1.13
TPM2-202ENST00000360958 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
TPM2-202ENST00000360958 LTKP29376 864 aa22.1■■□□□ 1.13
TPM2-202ENST00000360958 HDGFP51858 240 aaKnown RBP22.1■■□□□ 1.13
TPM2-202ENST00000360958 TXNDC2Q86VQ3 553 aa22.1■■□□□ 1.13
TPM2-202ENST00000360958 KIF1BO60333 1816 aa22.08■■□□□ 1.12
TPM2-202ENST00000360958 RIMS2Q9UQ26 1411 aa22.07■■□□□ 1.12
TPM2-202ENST00000360958 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms