RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
CSNK1E-201ENST00000359867 A2MP01023 1474 aa20.02■□□□□ 0.8
CSNK1E-201ENST00000359867 ERBINQ96RT1 1412 aa20.02■□□□□ 0.8
CSNK1E-201ENST00000359867 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.79
CSNK1E-201ENST00000359867 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.79
CSNK1E-201ENST00000359867 MAGI2Q86UL8 1455 aa20.01■□□□□ 0.79
CSNK1E-201ENST00000359867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.791e-6■■■□□ 14.6
CSNK1E-201ENST00000359867 KIF3BO15066 747 aa19.99■□□□□ 0.79
CSNK1E-201ENST00000359867 ARHGEF40Q8TER5 1519 aa19.97■□□□□ 0.79
CSNK1E-201ENST00000359867 NUP155O75694 1391 aa19.96■□□□□ 0.79
CSNK1E-201ENST00000359867 ATP10AO60312 1499 aa19.95■□□□□ 0.78
CSNK1E-201ENST00000359867 SIGLEC1Q9BZZ2 1709 aa19.94■□□□□ 0.78
CSNK1E-201ENST00000359867 EIF2AK4Q9P2K8 1649 aaKnown RBP19.94■□□□□ 0.78
CSNK1E-201ENST00000359867 UNC13BO14795 1591 aa19.94■□□□□ 0.78
CSNK1E-201ENST00000359867 PZPP20742 1482 aa19.93■□□□□ 0.78
CSNK1E-201ENST00000359867 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
CSNK1E-201ENST00000359867 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
CSNK1E-201ENST00000359867 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
CSNK1E-201ENST00000359867 FOXD1Q16676 465 aa19.91■□□□□ 0.78
CSNK1E-201ENST00000359867 GGT6Q6P531 493 aa19.91■□□□□ 0.78
CSNK1E-201ENST00000359867 SIN3AQ96ST3 1273 aa19.91■□□□□ 0.78
CSNK1E-201ENST00000359867 DEPDC5O75140 1603 aa19.9■□□□□ 0.78
CSNK1E-201ENST00000359867 MROH1Q8NDA8 1641 aa19.9■□□□□ 0.78
CSNK1E-201ENST00000359867 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
CSNK1E-201ENST00000359867 KDM5DQ9BY66 1539 aa19.88■□□□□ 0.77
CSNK1E-201ENST00000359867 REREQ9P2R6 1566 aa19.87■□□□□ 0.77
CSNK1E-201ENST00000359867 MIER1Q8N108 512 aa19.87■□□□□ 0.77
CSNK1E-201ENST00000359867 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
CSNK1E-201ENST00000359867 PRDM15P57071 1507 aaPredicted RBP19.86■□□□□ 0.77
CSNK1E-201ENST00000359867 BCORL1Q5H9F3 1711 aa19.86■□□□□ 0.77
CSNK1E-201ENST00000359867 IQGAP3Q86VI3 1631 aa19.86■□□□□ 0.77
CSNK1E-201ENST00000359867 PKD2Q13563 968 aa19.85■□□□□ 0.77
CSNK1E-201ENST00000359867 MLECQ14165 292 aa19.85■□□□□ 0.77
CSNK1E-201ENST00000359867 ARID4BQ4LE39 1312 aaPredicted RBP19.84■□□□□ 0.77
CSNK1E-201ENST00000359867 AGLP35573 1532 aa19.83■□□□□ 0.76
CSNK1E-201ENST00000359867 KANK1Q14678 1352 aa19.82■□□□□ 0.76
CSNK1E-201ENST00000359867 CEP152O94986 1710 aa19.81■□□□□ 0.76
CSNK1E-201ENST00000359867 VWDEQ8N2E2 1590 aa19.81■□□□□ 0.76
CSNK1E-201ENST00000359867 PPP1R15AO75807 674 aaPredicted RBP19.8■□□□□ 0.76
CSNK1E-201ENST00000359867 TONSLQ96HA7 1378 aa19.79■□□□□ 0.76
CSNK1E-201ENST00000359867 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
CSNK1E-201ENST00000359867 ABCC3O15438 1527 aa19.76■□□□□ 0.75
CSNK1E-201ENST00000359867 TET3O43151 1660 aa19.76■□□□□ 0.75
CSNK1E-201ENST00000359867 E9PCH4 1651 aa19.75■□□□□ 0.75
CSNK1E-201ENST00000359867 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
CSNK1E-201ENST00000359867 EFCAB6Q5THR3 1501 aa19.73■□□□□ 0.75
CSNK1E-201ENST00000359867 LMTK2Q8IWU2 1503 aa19.72■□□□□ 0.75
CSNK1E-201ENST00000359867 CAMSAP1Q5T5Y3 1602 aa19.71■□□□□ 0.75
CSNK1E-201ENST00000359867 CFAP65Q6ZU64 1925 aaKnown RBP19.71■□□□□ 0.75
CSNK1E-201ENST00000359867 CLTCQ00610 1675 aaKnown RBP19.71■□□□□ 0.75
CSNK1E-201ENST00000359867 ZC3H13Q5T200 1668 aaKnown RBP19.7■□□□□ 0.74
CSNK1E-201ENST00000359867 NPATQ14207 1427 aa19.69■□□□□ 0.74
CSNK1E-201ENST00000359867 PLA2R1Q13018 1463 aa19.68■□□□□ 0.74
CSNK1E-201ENST00000359867 PRKCSHP14314 528 aaPredicted RBP19.68■□□□□ 0.74
CSNK1E-201ENST00000359867 ESF1Q9H501 851 aaKnown RBP19.66■□□□□ 0.74
CSNK1E-201ENST00000359867 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.74
CSNK1E-201ENST00000359867 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
CSNK1E-201ENST00000359867 RPRD2Q5VT52 1461 aaKnown RBP19.63■□□□□ 0.73
CSNK1E-201ENST00000359867 FBXO31Q5XUX0 539 aaPredicted RBP19.62■□□□□ 0.73
CSNK1E-201ENST00000359867 UGGT1Q9NYU2 1555 aa19.62■□□□□ 0.73
CSNK1E-201ENST00000359867 CCDC144AA2RUR9 1427 aa19.61■□□□□ 0.73
CSNK1E-201ENST00000359867 FER1L4A9Z1Z3 1794 aa19.61■□□□□ 0.73
CSNK1E-201ENST00000359867 PTPRTO14522 1441 aa19.61■□□□□ 0.73
CSNK1E-201ENST00000359867 ARHGAP31Q2M1Z3 1444 aa19.6■□□□□ 0.73
CSNK1E-201ENST00000359867 TRPM2O94759 1503 aa19.6■□□□□ 0.73
CSNK1E-201ENST00000359867 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
CSNK1E-201ENST00000359867 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
CSNK1E-201ENST00000359867 MADDQ8WXG6 1647 aa19.58■□□□□ 0.73
CSNK1E-201ENST00000359867 CLTCL1P53675 1640 aa19.58■□□□□ 0.73
CSNK1E-201ENST00000359867 PREX1Q8TCU6 1659 aa19.58■□□□□ 0.72
CSNK1E-201ENST00000359867 CEBPAP49715 358 aaPredicted RBP19.57■□□□□ 0.72
CSNK1E-201ENST00000359867 NOS1P29475 1434 aa19.56■□□□□ 0.72
CSNK1E-201ENST00000359867 SYNMO15061 1565 aa19.56■□□□□ 0.72
CSNK1E-201ENST00000359867 CNTLNQ9NXG0 1405 aa19.56■□□□□ 0.72
CSNK1E-201ENST00000359867 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
CSNK1E-201ENST00000359867 RIMS1Q86UR5 1692 aaKnown RBP19.54■□□□□ 0.72
CSNK1E-201ENST00000359867 L3MBTL2Q969R5 705 aa19.54■□□□□ 0.72
CSNK1E-201ENST00000359867 MROH2AA6NES4 1674 aa19.54■□□□□ 0.72
CSNK1E-201ENST00000359867 ADAMTSL3P82987 1691 aa19.54■□□□□ 0.72
CSNK1E-201ENST00000359867 RGL3Q3MIN7 710 aa19.53■□□□□ 0.72
CSNK1E-201ENST00000359867 C3P01024 1663 aa19.52■□□□□ 0.72
CSNK1E-201ENST00000359867 SPATA31D1Q6ZQQ2 1576 aa19.5■□□□□ 0.71
CSNK1E-201ENST00000359867 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
CSNK1E-201ENST00000359867 IDI1Q13907 227 aa19.49■□□□□ 0.71
CSNK1E-201ENST00000359867 PIK3C2BO00750 1634 aa19.48■□□□□ 0.71
CSNK1E-201ENST00000359867 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
CSNK1E-201ENST00000359867 KIF1BO60333 1816 aa19.46■□□□□ 0.71
CSNK1E-201ENST00000359867 TNRQ92752 1358 aa19.44■□□□□ 0.7
CSNK1E-201ENST00000359867 KDM2AQ9Y2K7 1162 aa19.44■□□□□ 0.7
CSNK1E-201ENST00000359867 DCAF11Q8TEB1 546 aa19.44■□□□□ 0.7
CSNK1E-201ENST00000359867 SLC52A1Q9NWF4 448 aa19.44■□□□□ 0.7
CSNK1E-201ENST00000359867 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
CSNK1E-201ENST00000359867 ADGRB3O60242 1522 aa19.42■□□□□ 0.7
CSNK1E-201ENST00000359867 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
CSNK1E-201ENST00000359867 EIF4G2P78344 907 aaKnown RBP eCLIP19.4■□□□□ 0.73e-13■□□□□ 10.1
CSNK1E-201ENST00000359867 ANP32EQ9BTT0 268 aa19.4■□□□□ 0.7
CSNK1E-201ENST00000359867 PTPRMP28827 1452 aa19.4■□□□□ 0.7
CSNK1E-201ENST00000359867 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.7
CSNK1E-201ENST00000359867 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.7
CSNK1E-201ENST00000359867 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms