RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 UNC13BO14795 1591 aa22.8■■□□□ 1.24
TPM1-206ENST00000358278 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
TPM1-206ENST00000358278 MROH1Q8NDA8 1641 aa22.79■■□□□ 1.24
TPM1-206ENST00000358278 MLECQ14165 292 aa22.78■■□□□ 1.24
TPM1-206ENST00000358278 PRDM15P57071 1507 aaPredicted RBP22.78■■□□□ 1.24
TPM1-206ENST00000358278 GGT6Q6P531 493 aa22.77■■□□□ 1.23
TPM1-206ENST00000358278 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
TPM1-206ENST00000358278 CEP152O94986 1710 aa22.76■■□□□ 1.23
TPM1-206ENST00000358278 ZC3H13Q5T200 1668 aaKnown RBP22.75■■□□□ 1.23
TPM1-206ENST00000358278 CLTCQ00610 1675 aaKnown RBP22.73■■□□□ 1.23
TPM1-206ENST00000358278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.239e-7■■■□□ 19
TPM1-206ENST00000358278 ADAMTSL3P82987 1691 aa22.72■■□□□ 1.23
TPM1-206ENST00000358278 MADDQ8WXG6 1647 aa22.72■■□□□ 1.23
TPM1-206ENST00000358278 KANK1Q14678 1352 aa22.71■■□□□ 1.23
TPM1-206ENST00000358278 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
TPM1-206ENST00000358278 KDM5DQ9BY66 1539 aa22.7■■□□□ 1.23
TPM1-206ENST00000358278 FAM135AQ9P2D6 1515 aa22.7■■□□□ 1.23
TPM1-206ENST00000358278 RIMS1Q86UR5 1692 aaKnown RBP22.69■■□□□ 1.22
TPM1-206ENST00000358278 VWDEQ8N2E2 1590 aa22.68■■□□□ 1.22
TPM1-206ENST00000358278 TRIM52Q96A61 297 aa22.68■■□□□ 1.22
TPM1-206ENST00000358278 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
TPM1-206ENST00000358278 NUP155O75694 1391 aa22.67■■□□□ 1.22
TPM1-206ENST00000358278 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
TPM1-206ENST00000358278 MROH2AA6NES4 1674 aa22.67■■□□□ 1.22
TPM1-206ENST00000358278 ABCC3O15438 1527 aa22.67■■□□□ 1.22
TPM1-206ENST00000358278 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
TPM1-206ENST00000358278 TET3O43151 1660 aa22.66■■□□□ 1.22
TPM1-206ENST00000358278 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
TPM1-206ENST00000358278 WASHC2CQ9Y4E1 1318 aa22.65■■□□□ 1.22
TPM1-206ENST00000358278 CFAP65Q6ZU64 1925 aaKnown RBP22.65■■□□□ 1.22
TPM1-206ENST00000358278 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
TPM1-206ENST00000358278 HRCP23327 699 aa22.62■■□□□ 1.21
TPM1-206ENST00000358278 LMTK2Q8IWU2 1503 aa22.61■■□□□ 1.21
TPM1-206ENST00000358278 C3P01024 1663 aa22.6■■□□□ 1.21
TPM1-206ENST00000358278 EFCAB6Q5THR3 1501 aa22.6■■□□□ 1.21
TPM1-206ENST00000358278 E9PCH4 1651 aa22.59■■□□□ 1.21
TPM1-206ENST00000358278 PZPP20742 1482 aa22.59■■□□□ 1.21
TPM1-206ENST00000358278 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
TPM1-206ENST00000358278 ZMYM3Q14202 1370 aa22.53■■□□□ 1.2
TPM1-206ENST00000358278 PREX1Q8TCU6 1659 aa22.53■■□□□ 1.2
TPM1-206ENST00000358278 KDM4FA0A1W2PPD8 638 aa22.51■■□□□ 1.19
TPM1-206ENST00000358278 MPHOSPH9Q99550 1183 aa22.51■■□□□ 1.19
TPM1-206ENST00000358278 SPHKAPQ2M3C7 1700 aa22.51■■□□□ 1.19
TPM1-206ENST00000358278 PTPRMP28827 1452 aa22.51■■□□□ 1.19
TPM1-206ENST00000358278 RPRD2Q5VT52 1461 aaKnown RBP22.51■■□□□ 1.19
TPM1-206ENST00000358278 NPATQ14207 1427 aa22.51■■□□□ 1.19
TPM1-206ENST00000358278 ARHGAP31Q2M1Z3 1444 aa22.51■■□□□ 1.19
TPM1-206ENST00000358278 PLPPR3Q6T4P5 718 aa22.49■■□□□ 1.19
TPM1-206ENST00000358278 PKD2Q13563 968 aa22.48■■□□□ 1.19
TPM1-206ENST00000358278 CEBPAP49715 358 aaPredicted RBP22.45■■□□□ 1.19
TPM1-206ENST00000358278 SETD1BQ9UPS6 1966 aaKnown RBP22.45■■□□□ 1.18
TPM1-206ENST00000358278 ERVK-7P63135 1459 aa22.44■■□□□ 1.18
TPM1-206ENST00000358278 SPATA31D1Q6ZQQ2 1576 aa22.44■■□□□ 1.18
TPM1-206ENST00000358278 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
TPM1-206ENST00000358278 FOXD1Q16676 465 aa22.42■■□□□ 1.18
TPM1-206ENST00000358278 FBXO31Q5XUX0 539 aaPredicted RBP22.41■■□□□ 1.18
TPM1-206ENST00000358278 SYNMO15061 1565 aa22.4■■□□□ 1.18
TPM1-206ENST00000358278 TRPM2O94759 1503 aa22.39■■□□□ 1.17
TPM1-206ENST00000358278 NOS1P29475 1434 aa22.39■■□□□ 1.17
TPM1-206ENST00000358278 MYO3AQ8NEV4 1616 aa22.38■■□□□ 1.17
TPM1-206ENST00000358278 TNRQ92752 1358 aa22.36■■□□□ 1.17
TPM1-206ENST00000358278 PTPRTO14522 1441 aa22.36■■□□□ 1.17
TPM1-206ENST00000358278 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
TPM1-206ENST00000358278 KIF1BO60333 1816 aa22.35■■□□□ 1.17
TPM1-206ENST00000358278 UGGT1Q9NYU2 1555 aa22.34■■□□□ 1.17
TPM1-206ENST00000358278 CLTCL1P53675 1640 aa22.34■■□□□ 1.17
TPM1-206ENST00000358278 PLA2R1Q13018 1463 aa22.33■■□□□ 1.17
TPM1-206ENST00000358278 ZNF142P52746 1687 aaPredicted RBP22.32■■□□□ 1.16
TPM1-206ENST00000358278 MYO5BQ9ULV0 1848 aa22.31■■□□□ 1.16
TPM1-206ENST00000358278 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
TPM1-206ENST00000358278 ANKRD30BQ9BXX2 1392 aa22.3■■□□□ 1.16
TPM1-206ENST00000358278 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
TPM1-206ENST00000358278 CEP170BQ9Y4F5 1589 aaPredicted RBP22.28■■□□□ 1.16
TPM1-206ENST00000358278 CCER1Q8TC90 406 aaPredicted RBP22.28■■□□□ 1.16
TPM1-206ENST00000358278 UHRF1BP1Q6BDS2 1440 aa22.27■■□□□ 1.16
TPM1-206ENST00000358278 UBR1Q8IWV7 1749 aa22.27■■□□□ 1.16
TPM1-206ENST00000358278 SLC52A1Q9NWF4 448 aa22.27■■□□□ 1.16
TPM1-206ENST00000358278 KDM5AP29375 1690 aaKnown RBP22.27■■□□□ 1.16
TPM1-206ENST00000358278 ADGRB3O60242 1522 aa22.25■■□□□ 1.15
TPM1-206ENST00000358278 A2ML1A8K2U0 1454 aa22.24■■□□□ 1.15
TPM1-206ENST00000358278 IDI1Q13907 227 aa22.24■■□□□ 1.15
TPM1-206ENST00000358278 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
TPM1-206ENST00000358278 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
TPM1-206ENST00000358278 CHGAP10645 457 aaKnown RBP22.2■■□□□ 1.14
TPM1-206ENST00000358278 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
TPM1-206ENST00000358278 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
TPM1-206ENST00000358278 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
TPM1-206ENST00000358278 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
TPM1-206ENST00000358278 NEUROD1Q13562 356 aa22.14■■□□□ 1.14
TPM1-206ENST00000358278 IFT172Q9UG01 1749 aa22.13■■□□□ 1.13
TPM1-206ENST00000358278 PPLO60437 1756 aa22.13■■□□□ 1.13
TPM1-206ENST00000358278 SPATA31E1Q6ZUB1 1445 aa22.13■■□□□ 1.13
TPM1-206ENST00000358278 ZNF326Q5BKZ1 582 aaKnown RBP22.12■■□□□ 1.13
TPM1-206ENST00000358278 THEMISQ8N1K5 641 aaPredicted RBP22.11■■□□□ 1.13
TPM1-206ENST00000358278 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
TPM1-206ENST00000358278 RGL3Q3MIN7 710 aa22.1■■□□□ 1.13
TPM1-206ENST00000358278 SLIT1O75093 1534 aa22.09■■□□□ 1.13
TPM1-206ENST00000358278 NEXMIFQ5QGS0 1516 aa22.07■■□□□ 1.12
TPM1-206ENST00000358278 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
TPM1-206ENST00000358278 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms