RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
COL4A3BP-202ENST00000357457 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-202ENST00000357457 CEP170BQ9Y4F5 1589 aaPredicted RBP13.86□□□□□ -0.19
COL4A3BP-202ENST00000357457 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
COL4A3BP-202ENST00000357457 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
COL4A3BP-202ENST00000357457 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
COL4A3BP-202ENST00000357457 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
COL4A3BP-202ENST00000357457 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
COL4A3BP-202ENST00000357457 UBAP1LF5GYI3 381 aa13.82□□□□□ -0.2
COL4A3BP-202ENST00000357457 MAPK8IP2Q13387 824 aaPredicted RBP13.82□□□□□ -0.2
COL4A3BP-202ENST00000357457 SPATA31D1Q6ZQQ2 1576 aa13.82□□□□□ -0.2
COL4A3BP-202ENST00000357457 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
COL4A3BP-202ENST00000357457 KIF3BO15066 747 aa13.8□□□□□ -0.2
COL4A3BP-202ENST00000357457 FBXO31Q5XUX0 539 aaPredicted RBP13.8□□□□□ -0.2
COL4A3BP-202ENST00000357457 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
COL4A3BP-202ENST00000357457 TNRQ92752 1358 aa13.78□□□□□ -0.2
COL4A3BP-202ENST00000357457 PZPP20742 1482 aa13.78□□□□□ -0.2
COL4A3BP-202ENST00000357457 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.21
COL4A3BP-202ENST00000357457 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
COL4A3BP-202ENST00000357457 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
COL4A3BP-202ENST00000357457 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
COL4A3BP-202ENST00000357457 KDM5DQ9BY66 1539 aa13.75□□□□□ -0.21
COL4A3BP-202ENST00000357457 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
COL4A3BP-202ENST00000357457 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
COL4A3BP-202ENST00000357457 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
COL4A3BP-202ENST00000357457 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
COL4A3BP-202ENST00000357457 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
COL4A3BP-202ENST00000357457 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
COL4A3BP-202ENST00000357457 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
COL4A3BP-202ENST00000357457 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
COL4A3BP-202ENST00000357457 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
COL4A3BP-202ENST00000357457 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
COL4A3BP-202ENST00000357457 CPS1P31327 1500 aa13.73□□□□□ -0.21
COL4A3BP-202ENST00000357457 NLRP1Q9C000 1473 aa13.73□□□□□ -0.21
COL4A3BP-202ENST00000357457 TOM1O60784 492 aa13.72□□□□□ -0.21
COL4A3BP-202ENST00000357457 MED14O60244 1454 aa13.72□□□□□ -0.21
COL4A3BP-202ENST00000357457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL4A3BP-202ENST00000357457 DEPDC5O75140 1603 aa13.69□□□□□ -0.22
COL4A3BP-202ENST00000357457 HSPA1LP34931 641 aa13.69□□□□□ -0.22
COL4A3BP-202ENST00000357457 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
COL4A3BP-202ENST00000357457 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
COL4A3BP-202ENST00000357457 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
COL4A3BP-202ENST00000357457 NPHP4O75161 1426 aaPredicted RBP13.67□□□□□ -0.22
COL4A3BP-202ENST00000357457 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
COL4A3BP-202ENST00000357457 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
COL4A3BP-202ENST00000357457 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
COL4A3BP-202ENST00000357457 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
COL4A3BP-202ENST00000357457 ABCC3O15438 1527 aa13.65□□□□□ -0.22
COL4A3BP-202ENST00000357457 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
COL4A3BP-202ENST00000357457 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
COL4A3BP-202ENST00000357457 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
COL4A3BP-202ENST00000357457 VPS8Q8N3P4 1428 aa13.64□□□□□ -0.23
COL4A3BP-202ENST00000357457 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
COL4A3BP-202ENST00000357457 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
COL4A3BP-202ENST00000357457 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
COL4A3BP-202ENST00000357457 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
COL4A3BP-202ENST00000357457 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
COL4A3BP-202ENST00000357457 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
COL4A3BP-202ENST00000357457 MROH1Q8NDA8 1641 aa13.61□□□□□ -0.23
COL4A3BP-202ENST00000357457 LRRC7Q96NW7 1537 aa13.61□□□□□ -0.23
COL4A3BP-202ENST00000357457 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
COL4A3BP-202ENST00000357457 MYOM3Q5VTT5 1437 aa13.6□□□□□ -0.23
COL4A3BP-202ENST00000357457 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
COL4A3BP-202ENST00000357457 ARHGAP31Q2M1Z3 1444 aa13.59□□□□□ -0.23
COL4A3BP-202ENST00000357457 LOC105371045A0A1W2PR82 267 aa13.59□□□□□ -0.23
COL4A3BP-202ENST00000357457 LTKP29376 864 aa13.59□□□□□ -0.23
COL4A3BP-202ENST00000357457 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
COL4A3BP-202ENST00000357457 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.24
COL4A3BP-202ENST00000357457 CEP152O94986 1710 aa13.58□□□□□ -0.24
COL4A3BP-202ENST00000357457 SLIT1O75093 1534 aa13.57□□□□□ -0.24
COL4A3BP-202ENST00000357457 TXNDC2Q86VQ3 553 aa13.56□□□□□ -0.24
COL4A3BP-202ENST00000357457 SYNMO15061 1565 aa13.56□□□□□ -0.24
COL4A3BP-202ENST00000357457 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
COL4A3BP-202ENST00000357457 ABCC5O15440 1437 aa13.55□□□□□ -0.24
COL4A3BP-202ENST00000357457 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
COL4A3BP-202ENST00000357457 ERBINQ96RT1 1412 aa13.54□□□□□ -0.24
COL4A3BP-202ENST00000357457 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
COL4A3BP-202ENST00000357457 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
COL4A3BP-202ENST00000357457 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
COL4A3BP-202ENST00000357457 EID1Q9Y6B2 187 aa13.52□□□□□ -0.25
COL4A3BP-202ENST00000357457 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
COL4A3BP-202ENST00000357457 IDI1Q13907 227 aa13.5□□□□□ -0.25
COL4A3BP-202ENST00000357457 CROCC2H7BZ55 1655 aa13.5□□□□□ -0.25
COL4A3BP-202ENST00000357457 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
COL4A3BP-202ENST00000357457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL4A3BP-202ENST00000357457 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
COL4A3BP-202ENST00000357457 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
COL4A3BP-202ENST00000357457 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
COL4A3BP-202ENST00000357457 DAPK1P53355 1430 aa13.48□□□□□ -0.25
COL4A3BP-202ENST00000357457 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
COL4A3BP-202ENST00000357457 RGS17Q9UGC6 210 aaPredicted RBP13.48□□□□□ -0.25
COL4A3BP-202ENST00000357457 KANK1Q14678 1352 aa13.47□□□□□ -0.25
COL4A3BP-202ENST00000357457 KCNA6P17658 529 aa13.47□□□□□ -0.25
COL4A3BP-202ENST00000357457 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
COL4A3BP-202ENST00000357457 TET3O43151 1660 aa13.47□□□□□ -0.25
COL4A3BP-202ENST00000357457 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
COL4A3BP-202ENST00000357457 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.26
COL4A3BP-202ENST00000357457 ANKRD30AQ9BXX3 1397 aa13.45□□□□□ -0.26
COL4A3BP-202ENST00000357457 APLP2Q06481 763 aa13.45□□□□□ -0.26
COL4A3BP-202ENST00000357457 NOS1P29475 1434 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms