RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 NAIPQ13075 1403 aa24.07■■□□□ 1.44
FDPS-201ENST00000356657 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
FDPS-201ENST00000356657 KIF3BO15066 747 aa24.06■■□□□ 1.44
FDPS-201ENST00000356657 MLECQ14165 292 aa24.06■■□□□ 1.44
FDPS-201ENST00000356657 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
FDPS-201ENST00000356657 FER1L4A9Z1Z3 1794 aa24.05■■□□□ 1.44
FDPS-201ENST00000356657 RIMS1Q86UR5 1692 aaKnown RBP24.05■■□□□ 1.44
FDPS-201ENST00000356657 CNTLNQ9NXG0 1405 aa24.05■■□□□ 1.44
FDPS-201ENST00000356657 ZC3H13Q5T200 1668 aaKnown RBP24.04■■□□□ 1.44
FDPS-201ENST00000356657 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
FDPS-201ENST00000356657 UNC13BO14795 1591 aa24.02■■□□□ 1.44
FDPS-201ENST00000356657 MROH1Q8NDA8 1641 aa24.01■■□□□ 1.43
FDPS-201ENST00000356657 KDM5DQ9BY66 1539 aa24.01■■□□□ 1.43
FDPS-201ENST00000356657 MROH2AA6NES4 1674 aa24■■□□□ 1.43
FDPS-201ENST00000356657 PTPRMP28827 1452 aa23.99■■□□□ 1.43
FDPS-201ENST00000356657 KANK1Q14678 1352 aa23.98■■□□□ 1.43
FDPS-201ENST00000356657 GGT6Q6P531 493 aa23.98■■□□□ 1.43
FDPS-201ENST00000356657 ESF1Q9H501 851 aaKnown RBP23.98■■□□□ 1.43
FDPS-201ENST00000356657 VWDEQ8N2E2 1590 aa23.96■■□□□ 1.43
FDPS-201ENST00000356657 SETD5Q9C0A6 1442 aa23.95■■□□□ 1.42
FDPS-201ENST00000356657 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
FDPS-201ENST00000356657 CLTCQ00610 1675 aaKnown RBP23.93■■□□□ 1.42
FDPS-201ENST00000356657 ABCC3O15438 1527 aa23.93■■□□□ 1.42
FDPS-201ENST00000356657 LMTK2Q8IWU2 1503 aa23.93■■□□□ 1.42
FDPS-201ENST00000356657 IQGAP3Q86VI3 1631 aa23.91■■□□□ 1.42
FDPS-201ENST00000356657 WASHC2CQ9Y4E1 1318 aa23.91■■□□□ 1.42
FDPS-201ENST00000356657 CEP152O94986 1710 aa23.9■■□□□ 1.42
FDPS-201ENST00000356657 HRCP23327 699 aa23.89■■□□□ 1.42
FDPS-201ENST00000356657 CAMSAP1Q5T5Y3 1602 aa23.88■■□□□ 1.41
FDPS-201ENST00000356657 TET3O43151 1660 aa23.87■■□□□ 1.41
FDPS-201ENST00000356657 ARHGAP31Q2M1Z3 1444 aa23.86■■□□□ 1.41
FDPS-201ENST00000356657 C3P01024 1663 aa23.86■■□□□ 1.41
FDPS-201ENST00000356657 NUP155O75694 1391 aa23.85■■□□□ 1.41
FDPS-201ENST00000356657 EFCAB6Q5THR3 1501 aa23.84■■□□□ 1.41
FDPS-201ENST00000356657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.84■■□□□ 1.411e-9■□□□□ 9.8
FDPS-201ENST00000356657 RAB3GAP2Q9H2M9 1393 aa23.84■■□□□ 1.41
FDPS-201ENST00000356657 ZMYM3Q14202 1370 aa23.83■■□□□ 1.41
FDPS-201ENST00000356657 PZPP20742 1482 aa23.83■■□□□ 1.41
FDPS-201ENST00000356657 RPRD2Q5VT52 1461 aaKnown RBP23.83■■□□□ 1.41
FDPS-201ENST00000356657 NPATQ14207 1427 aa23.81■■□□□ 1.4
FDPS-201ENST00000356657 SETD1BQ9UPS6 1966 aaKnown RBP23.81■■□□□ 1.4
FDPS-201ENST00000356657 CEBPAP49715 358 aaPredicted RBP23.75■■□□□ 1.39
FDPS-201ENST00000356657 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
FDPS-201ENST00000356657 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
FDPS-201ENST00000356657 PREX1Q8TCU6 1659 aa23.73■■□□□ 1.39
FDPS-201ENST00000356657 E9PCH4 1651 aa23.73■■□□□ 1.39
FDPS-201ENST00000356657 ERVK-7P63135 1459 aa23.71■■□□□ 1.39
FDPS-201ENST00000356657 LMTK3Q96Q04 1460 aa23.69■■□□□ 1.38
FDPS-201ENST00000356657 SLC4A1APQ9BWU0 796 aaKnown RBP23.68■■□□□ 1.38
FDPS-201ENST00000356657 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
FDPS-201ENST00000356657 NOS1P29475 1434 aa23.67■■□□□ 1.38
FDPS-201ENST00000356657 TNRQ92752 1358 aa23.65■■□□□ 1.38
FDPS-201ENST00000356657 SPHKAPQ2M3C7 1700 aa23.65■■□□□ 1.38
FDPS-201ENST00000356657 NLRP1Q9C000 1473 aa23.65■■□□□ 1.38
FDPS-201ENST00000356657 MYO3AQ8NEV4 1616 aa23.64■■□□□ 1.38
FDPS-201ENST00000356657 MPHOSPH9Q99550 1183 aa23.64■■□□□ 1.38
FDPS-201ENST00000356657 ZNF142P52746 1687 aaPredicted RBP23.63■■□□□ 1.37
FDPS-201ENST00000356657 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
FDPS-201ENST00000356657 PTPRTO14522 1441 aa23.62■■□□□ 1.37
FDPS-201ENST00000356657 UHRF1BP1Q6BDS2 1440 aa23.62■■□□□ 1.37
FDPS-201ENST00000356657 PKD2Q13563 968 aa23.61■■□□□ 1.37
FDPS-201ENST00000356657 TRPM2O94759 1503 aa23.6■■□□□ 1.37
FDPS-201ENST00000356657 KDM5AP29375 1690 aaKnown RBP23.6■■□□□ 1.37
FDPS-201ENST00000356657 FBXO31Q5XUX0 539 aaPredicted RBP23.6■■□□□ 1.37
FDPS-201ENST00000356657 SYNMO15061 1565 aa23.6■■□□□ 1.37
FDPS-201ENST00000356657 SLC52A1Q9NWF4 448 aa23.59■■□□□ 1.37
FDPS-201ENST00000356657 PIK3C2BO00750 1634 aa23.58■■□□□ 1.37
FDPS-201ENST00000356657 HSPA2P54652 639 aa23.58■■□□□ 1.37
FDPS-201ENST00000356657 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
FDPS-201ENST00000356657 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
FDPS-201ENST00000356657 UGGT1Q9NYU2 1555 aa23.5■■□□□ 1.35
FDPS-201ENST00000356657 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
FDPS-201ENST00000356657 UBR1Q8IWV7 1749 aa23.49■■□□□ 1.35
FDPS-201ENST00000356657 ADGRB3O60242 1522 aa23.49■■□□□ 1.35
FDPS-201ENST00000356657 CCDC144AA2RUR9 1427 aa23.48■■□□□ 1.35
FDPS-201ENST00000356657 KIF1BO60333 1816 aa23.48■■□□□ 1.35
FDPS-201ENST00000356657 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
FDPS-201ENST00000356657 NEURL4Q96JN8 1562 aa23.46■■□□□ 1.35
FDPS-201ENST00000356657 DHX57Q6P158 1386 aaKnown RBP23.45■■□□□ 1.35
FDPS-201ENST00000356657 ANKRD30BQ9BXX2 1392 aa23.45■■□□□ 1.35
FDPS-201ENST00000356657 IDI1Q13907 227 aa23.45■■□□□ 1.34
FDPS-201ENST00000356657 THEMISQ8N1K5 641 aaPredicted RBP23.44■■□□□ 1.34
FDPS-201ENST00000356657 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
FDPS-201ENST00000356657 FOXD1Q16676 465 aa23.42■■□□□ 1.34
FDPS-201ENST00000356657 STAG3Q9UJ98 1225 aa23.41■■□□□ 1.34
FDPS-201ENST00000356657 SLIT1O75093 1534 aa23.39■■□□□ 1.34
FDPS-201ENST00000356657 MYO5BQ9ULV0 1848 aa23.38■■□□□ 1.33
FDPS-201ENST00000356657 STRCQ7RTU9 1775 aa23.38■■□□□ 1.33
FDPS-201ENST00000356657 ARHGAP23Q9P227 1491 aa23.37■■□□□ 1.33
FDPS-201ENST00000356657 CLSPNQ9HAW4 1339 aa23.36■■□□□ 1.33
FDPS-201ENST00000356657 POLR1AO95602 1720 aaPredicted RBP23.35■■□□□ 1.33
FDPS-201ENST00000356657 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
FDPS-201ENST00000356657 HDGFP51858 240 aaKnown RBP23.33■■□□□ 1.33
FDPS-201ENST00000356657 SPATA31E1Q6ZUB1 1445 aa23.32■■□□□ 1.32
FDPS-201ENST00000356657 DMRT2Q9Y5R5 561 aa23.31■■□□□ 1.32
FDPS-201ENST00000356657 RPGRIP1LQ68CZ1 1315 aa23.3■■□□□ 1.32
FDPS-201ENST00000356657 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
FDPS-201ENST00000356657 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
FDPS-201ENST00000356657 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
FDPS-201ENST00000356657 ANKLE2Q86XL3 938 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms