RNA–Protein interactions for RNA: ENST00000355327.7

THSD4-202, Transcript of thrombospondin type 1 domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene THSD4, Length 9,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-202ENST00000355327 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
THSD4-202ENST00000355327 CCDC39Q9UFE4 941 aa17.15■□□□□ 0.34
THSD4-202ENST00000355327 SEPT11Q9NVA2 429 aaKnown RBP17.15■□□□□ 0.34
THSD4-202ENST00000355327 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
THSD4-202ENST00000355327 ENOX2Q16206 610 aaKnown RBP17.15■□□□□ 0.34
THSD4-202ENST00000355327 RBM10P98175 930 aaKnown RBP17.15■□□□□ 0.34
THSD4-202ENST00000355327 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
THSD4-202ENST00000355327 UBE2Q2Q8WVN8 375 aa17.14■□□□□ 0.33
THSD4-202ENST00000355327 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
THSD4-202ENST00000355327 NAP1L1P55209 391 aaKnown RBP17.14■□□□□ 0.33
THSD4-202ENST00000355327 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
THSD4-202ENST00000355327 E9PSI1 815 aa17.13■□□□□ 0.33
THSD4-202ENST00000355327 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
THSD4-202ENST00000355327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.13■□□□□ 0.336e-14■■■■■ 335.4
THSD4-202ENST00000355327 FOXD4L5Q5VV16 416 aaPredicted RBP17.12■□□□□ 0.33
THSD4-202ENST00000355327 FOXD4L4Q8WXT5 416 aaPredicted RBP17.12■□□□□ 0.33
THSD4-202ENST00000355327 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
THSD4-202ENST00000355327 BBXQ8WY36 941 aaPredicted RBP17.12■□□□□ 0.33
THSD4-202ENST00000355327 KRI1Q8N9T8 703 aaKnown RBP17.12■□□□□ 0.33
THSD4-202ENST00000355327 H3BQV1 296 aa17.12■□□□□ 0.33
THSD4-202ENST00000355327 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
THSD4-202ENST00000355327 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
THSD4-202ENST00000355327 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
THSD4-202ENST00000355327 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
THSD4-202ENST00000355327 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
THSD4-202ENST00000355327 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
THSD4-202ENST00000355327 PDIA4P13667 645 aaKnown RBP17.09■□□□□ 0.33
THSD4-202ENST00000355327 ODF2Q5BJF6 829 aa17.08■□□□□ 0.33
THSD4-202ENST00000355327 EIF3JO75822 258 aaKnown RBP17.08■□□□□ 0.33
THSD4-202ENST00000355327 HOOK1Q9UJC3 728 aaKnown RBP17.08■□□□□ 0.33
THSD4-202ENST00000355327 CFAP57Q96MR6 1250 aa17.08■□□□□ 0.32
THSD4-202ENST00000355327 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
THSD4-202ENST00000355327 GOLGA6L10A0A0M3HER8 536 aa17.07■□□□□ 0.32
THSD4-202ENST00000355327 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
THSD4-202ENST00000355327 HOMEZQ8IX15 550 aa17.07■□□□□ 0.32
THSD4-202ENST00000355327 GON4LQ3T8J9 2241 aa17.07■□□□□ 0.32
THSD4-202ENST00000355327 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
THSD4-202ENST00000355327 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
THSD4-202ENST00000355327 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
THSD4-202ENST00000355327 SEPT6Q14141 434 aa17.07■□□□□ 0.32
THSD4-202ENST00000355327 RWDD1Q9H446 243 aaPredicted RBP17.07■□□□□ 0.32
THSD4-202ENST00000355327 SEPT7Q16181 437 aaKnown RBP17.06■□□□□ 0.32
THSD4-202ENST00000355327 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
THSD4-202ENST00000355327 CEP63Q96MT8 703 aa17.06■□□□□ 0.32
THSD4-202ENST00000355327 APBB1O00213 710 aa17.06■□□□□ 0.32
THSD4-202ENST00000355327 SETSIPP0DME0 302 aa17.05■□□□□ 0.32
THSD4-202ENST00000355327 CDCA8Q53HL2 280 aa17.05■□□□□ 0.32
THSD4-202ENST00000355327 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
THSD4-202ENST00000355327 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
THSD4-202ENST00000355327 CCDC175P0C221 793 aa17.05■□□□□ 0.32
THSD4-202ENST00000355327 SUDS3Q9H7L9 328 aaPredicted RBP17.04■□□□□ 0.32
THSD4-202ENST00000355327 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
THSD4-202ENST00000355327 GTF2A1P52655 376 aaPredicted RBP17.04■□□□□ 0.32
THSD4-202ENST00000355327 FANCIQ9NVI1 1328 aa17.04■□□□□ 0.32
THSD4-202ENST00000355327 CCP110O43303 1012 aa17.04■□□□□ 0.32
THSD4-202ENST00000355327 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
THSD4-202ENST00000355327 ERLIN2O94905 339 aa17.03■□□□□ 0.32
THSD4-202ENST00000355327 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
THSD4-202ENST00000355327 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.31
THSD4-202ENST00000355327 TMX4Q9H1E5 349 aaPredicted RBP17.02■□□□□ 0.31
THSD4-202ENST00000355327 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
THSD4-202ENST00000355327 UQCRHLA0A096LP55 91 aa17.01■□□□□ 0.31
THSD4-202ENST00000355327 UQCRHP07919 91 aa17.01■□□□□ 0.31
THSD4-202ENST00000355327 DNAJC2Q99543 621 aaKnown RBP17.01■□□□□ 0.31
THSD4-202ENST00000355327 IPO8O15397 1037 aaKnown RBP17.01■□□□□ 0.31
THSD4-202ENST00000355327 FOXD4L6Q3SYB3 417 aaPredicted RBP17■□□□□ 0.31
THSD4-202ENST00000355327 FOXD4L3Q6VB84 417 aaPredicted RBP17■□□□□ 0.31
THSD4-202ENST00000355327 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
THSD4-202ENST00000355327 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
THSD4-202ENST00000355327 CPSF2Q9P2I0 782 aaKnown RBP17■□□□□ 0.31
THSD4-202ENST00000355327 PAF1Q8N7H5 531 aa17■□□□□ 0.31
THSD4-202ENST00000355327 WDR66Q8TBY9 1149 aa17■□□□□ 0.31
THSD4-202ENST00000355327 ANKRD62A6NC57 917 aa16.99■□□□□ 0.31
THSD4-202ENST00000355327 RBM33Q96EV2 1170 aaKnown RBP16.99■□□□□ 0.31
THSD4-202ENST00000355327 FAM107BQ9H098 131 aa16.99■□□□□ 0.31
THSD4-202ENST00000355327 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
THSD4-202ENST00000355327 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
THSD4-202ENST00000355327 MARCH6O60337 910 aa16.98■□□□□ 0.31
THSD4-202ENST00000355327 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
THSD4-202ENST00000355327 CHMP3Q9Y3E7 222 aa16.98■□□□□ 0.31
THSD4-202ENST00000355327 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
THSD4-202ENST00000355327 MRE11P49959 708 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 RABEP1Q15276 862 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 SASS6Q6UVJ0 657 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 SWAP70Q9UH65 585 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 FAM114A1Q8IWE2 563 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 ERLIN1O75477 346 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
THSD4-202ENST00000355327 PAXIP1Q6ZW49 1069 aaPredicted RBP16.96■□□□□ 0.31
THSD4-202ENST00000355327 PPM1EQ8WY54 764 aa16.96■□□□□ 0.31
THSD4-202ENST00000355327 ZMYND15Q9H091 742 aa16.96■□□□□ 0.31
THSD4-202ENST00000355327 TDO2P48775 406 aa16.95■□□□□ 0.3
THSD4-202ENST00000355327 FAM184AQ8NB25 1140 aa16.95■□□□□ 0.3
THSD4-202ENST00000355327 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
THSD4-202ENST00000355327 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
THSD4-202ENST00000355327 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
THSD4-202ENST00000355327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
THSD4-202ENST00000355327 SHTN1A0MZ66 631 aa16.94■□□□□ 0.3
THSD4-202ENST00000355327 GBP2P32456 591 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms