RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 MROH1Q8NDA8 1641 aa34.01■■■■□ 3.04
SNX3-202ENST00000349379 PREX1Q8TCU6 1659 aa34.01■■■■□ 3.04
SNX3-202ENST00000349379 CEBPAP49715 358 aaPredicted RBP34.01■■■■□ 3.03
SNX3-202ENST00000349379 ANKRD30AQ9BXX3 1397 aa34■■■■□ 3.03
SNX3-202ENST00000349379 ERBINQ96RT1 1412 aa34■■■■□ 3.03
SNX3-202ENST00000349379 LMTK3Q96Q04 1460 aa34■■■■□ 3.03
SNX3-202ENST00000349379 RRBP1Q9P2E9 1410 aaKnown RBP33.99■■■■□ 3.03
SNX3-202ENST00000349379 PLPPR3Q6T4P5 718 aa33.98■■■■□ 3.03
SNX3-202ENST00000349379 KDM5DQ9BY66 1539 aa33.98■■■■□ 3.03
SNX3-202ENST00000349379 PTPRKQ15262 1439 aa33.97■■■■□ 3.03
SNX3-202ENST00000349379 ZMYM3Q14202 1370 aa33.97■■■■□ 3.03
SNX3-202ENST00000349379 DEPDC5O75140 1603 aa33.95■■■■□ 3.03
SNX3-202ENST00000349379 RRP7BPQ9NSQ0 103 aa33.95■■■■□ 3.03
SNX3-202ENST00000349379 CHIC2Q9UKJ5 165 aa33.95■■■■□ 3.03
SNX3-202ENST00000349379 ZC3H13Q5T200 1668 aaKnown RBP33.95■■■■□ 3.03
SNX3-202ENST00000349379 PRDM15P57071 1507 aaPredicted RBP33.9■■■■□ 3.02
SNX3-202ENST00000349379 NPATQ14207 1427 aa33.9■■■■□ 3.02
SNX3-202ENST00000349379 CEP152O94986 1710 aa33.87■■■■□ 3.01
SNX3-202ENST00000349379 ABCC3O15438 1527 aa33.87■■■■□ 3.01
SNX3-202ENST00000349379 ROCK1Q13464 1354 aa33.86■■■■□ 3.01
SNX3-202ENST00000349379 WASHC2CQ9Y4E1 1318 aa33.82■■■■□ 3.01
SNX3-202ENST00000349379 PZPP20742 1482 aa33.82■■■■□ 3
SNX3-202ENST00000349379 UHRF1BP1Q6BDS2 1440 aa33.81■■■■□ 3
SNX3-202ENST00000349379 CAMSAP1Q5T5Y3 1602 aa33.8■■■■□ 3
SNX3-202ENST00000349379 ANKRD50Q9ULJ7 1429 aa33.79■■■■□ 3
SNX3-202ENST00000349379 VWDEQ8N2E2 1590 aa33.78■■■■□ 3
SNX3-202ENST00000349379 MYO3AQ8NEV4 1616 aa33.78■■■■□ 3
SNX3-202ENST00000349379 ZNF142P52746 1687 aaPredicted RBP33.77■■■■□ 3
SNX3-202ENST00000349379 ILDR1Q86SU0 546 aaPredicted RBP33.72■■■□□ 2.99
SNX3-202ENST00000349379 LMTK2Q8IWU2 1503 aa33.71■■■□□ 2.99
SNX3-202ENST00000349379 ITGAEP38570 1179 aa33.71■■■□□ 2.99
SNX3-202ENST00000349379 UNC13BO14795 1591 aa33.71■■■□□ 2.99
SNX3-202ENST00000349379 HSPA2P54652 639 aa33.7■■■□□ 2.99
SNX3-202ENST00000349379 CFAP65Q6ZU64 1925 aaKnown RBP33.69■■■□□ 2.98
SNX3-202ENST00000349379 SPATA31D1Q6ZQQ2 1576 aa33.68■■■□□ 2.98
SNX3-202ENST00000349379 ARHGAP31Q2M1Z3 1444 aa33.67■■■□□ 2.98
SNX3-202ENST00000349379 CEP170BQ9Y4F5 1589 aaPredicted RBP33.67■■■□□ 2.98
SNX3-202ENST00000349379 GCC2Q8IWJ2 1684 aa33.65■■■□□ 2.98
SNX3-202ENST00000349379 KANK1Q14678 1352 aa33.65■■■□□ 2.98
SNX3-202ENST00000349379 FBXO31Q5XUX0 539 aaPredicted RBP33.65■■■□□ 2.98
SNX3-202ENST00000349379 STRCQ7RTU9 1775 aa33.64■■■□□ 2.98
SNX3-202ENST00000349379 TNRQ92752 1358 aa33.62■■■□□ 2.97
SNX3-202ENST00000349379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.62■■■□□ 2.97
SNX3-202ENST00000349379 ERVK-7P63135 1459 aa33.62■■■□□ 2.97
SNX3-202ENST00000349379 EFCAB6Q5THR3 1501 aa33.59■■■□□ 2.97
SNX3-202ENST00000349379 A2ML1A8K2U0 1454 aa33.58■■■□□ 2.97
SNX3-202ENST00000349379 TET3O43151 1660 aa33.58■■■□□ 2.97
SNX3-202ENST00000349379 IQGAP3Q86VI3 1631 aa33.57■■■□□ 2.96
SNX3-202ENST00000349379 NAIPQ13075 1403 aa33.55■■■□□ 2.96
SNX3-202ENST00000349379 NLRP1Q9C000 1473 aa33.55■■■□□ 2.96
SNX3-202ENST00000349379 HFM1A2PYH4 1435 aa33.51■■■□□ 2.95
SNX3-202ENST00000349379 PLA2R1Q13018 1463 aa33.49■■■□□ 2.95
SNX3-202ENST00000349379 RPRD2Q5VT52 1461 aaKnown RBP33.47■■■□□ 2.95
SNX3-202ENST00000349379 E9PCH4 1651 aa33.45■■■□□ 2.95
SNX3-202ENST00000349379 NOS1P29475 1434 aa33.44■■■□□ 2.94
SNX3-202ENST00000349379 SYNMO15061 1565 aa33.43■■■□□ 2.94
SNX3-202ENST00000349379 UGGT1Q9NYU2 1555 aa33.43■■■□□ 2.94
SNX3-202ENST00000349379 UBR1Q8IWV7 1749 aa33.42■■■□□ 2.94
SNX3-202ENST00000349379 POLR1AO95602 1720 aaPredicted RBP33.4■■■□□ 2.94
SNX3-202ENST00000349379 NUP155O75694 1391 aa33.39■■■□□ 2.94
SNX3-202ENST00000349379 KDM5AP29375 1690 aaKnown RBP33.38■■■□□ 2.93
SNX3-202ENST00000349379 PIK3C2BO00750 1634 aa33.37■■■□□ 2.93
SNX3-202ENST00000349379 PTPRTO14522 1441 aa33.36■■■□□ 2.93
SNX3-202ENST00000349379 DMRT2Q9Y5R5 561 aa33.32■■■□□ 2.92
SNX3-202ENST00000349379 THEMISQ8N1K5 641 aaPredicted RBP33.3■■■□□ 2.92
SNX3-202ENST00000349379 NEURL4Q96JN8 1562 aa33.3■■■□□ 2.92
SNX3-202ENST00000349379 PKD2Q13563 968 aa33.29■■■□□ 2.92
SNX3-202ENST00000349379 NCKAP5LQ9HCH0 1330 aa33.27■■■□□ 2.92
SNX3-202ENST00000349379 SPHKAPQ2M3C7 1700 aa33.25■■■□□ 2.91
SNX3-202ENST00000349379 IDI1Q13907 227 aa33.24■■■□□ 2.91
SNX3-202ENST00000349379 ADGRB3O60242 1522 aa33.23■■■□□ 2.91
SNX3-202ENST00000349379 SLIT1O75093 1534 aa33.23■■■□□ 2.91
SNX3-202ENST00000349379 ARHGAP23Q9P227 1491 aa33.23■■■□□ 2.91
SNX3-202ENST00000349379 MYO5BQ9ULV0 1848 aa33.23■■■□□ 2.91
SNX3-202ENST00000349379 SLC52A1Q9NWF4 448 aa33.22■■■□□ 2.91
SNX3-202ENST00000349379 MED14O60244 1454 aa33.19■■■□□ 2.9
SNX3-202ENST00000349379 TMEM131LA2VDJ0 1609 aa33.17■■■□□ 2.9
SNX3-202ENST00000349379 ANKLE2Q86XL3 938 aa33.16■■■□□ 2.9
SNX3-202ENST00000349379 IQGAP1P46940 1657 aa33.15■■■□□ 2.9
SNX3-202ENST00000349379 SETD5Q9C0A6 1442 aa33.15■■■□□ 2.9
SNX3-202ENST00000349379 SCAF11Q99590 1463 aaKnown RBP33.12■■■□□ 2.89
SNX3-202ENST00000349379 TMEM2Q9UHN6 1383 aa33.11■■■□□ 2.89
SNX3-202ENST00000349379 TRIM52Q96A61 297 aa33.11■■■□□ 2.89
SNX3-202ENST00000349379 NPHP4O75161 1426 aaPredicted RBP33.1■■■□□ 2.89
SNX3-202ENST00000349379 LTBP4Q8N2S1 1624 aa33.1■■■□□ 2.89
SNX3-202ENST00000349379 TRPM2O94759 1503 aa33.09■■■□□ 2.89
SNX3-202ENST00000349379 STAG3Q9UJ98 1225 aa33.07■■■□□ 2.88
SNX3-202ENST00000349379 CLTCL1P53675 1640 aa33.05■■■□□ 2.88
SNX3-202ENST00000349379 ACIN1Q9UKV3 1341 aaKnown RBP33.04■■■□□ 2.88
SNX3-202ENST00000349379 LTKP29376 864 aa33.04■■■□□ 2.88
SNX3-202ENST00000349379 SLC4A1APQ9BWU0 796 aaKnown RBP33.03■■■□□ 2.88
SNX3-202ENST00000349379 RAB3GAP2Q9H2M9 1393 aa33.03■■■□□ 2.88
SNX3-202ENST00000349379 ZFYVE9O95405 1425 aa33.02■■■□□ 2.88
SNX3-202ENST00000349379 TXNDC2Q86VQ3 553 aa33.01■■■□□ 2.87
SNX3-202ENST00000349379 KIF1BO60333 1816 aa33■■■□□ 2.87
SNX3-202ENST00000349379 EID1Q9Y6B2 187 aa32.98■■■□□ 2.87
SNX3-202ENST00000349379 ZNF335Q9H4Z2 1342 aaPredicted RBP32.96■■■□□ 2.87
SNX3-202ENST00000349379 CERKQ8TCT0 537 aa32.94■■■□□ 2.86
SNX3-202ENST00000349379 MPHOSPH9Q99550 1183 aa32.94■■■□□ 2.86
SNX3-202ENST00000349379 RIMS2Q9UQ26 1411 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms