RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 RNF17Q9BXT8 1623 aaKnown RBP21.16■□□□□ 0.98
TPM4-202ENST00000344824 KDM5DQ9BY66 1539 aa21.16■□□□□ 0.98
TPM4-202ENST00000344824 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
TPM4-202ENST00000344824 CEP152O94986 1710 aa21.15■□□□□ 0.98
TPM4-202ENST00000344824 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
TPM4-202ENST00000344824 UHRF1BP1Q6BDS2 1440 aa21.13■□□□□ 0.97
TPM4-202ENST00000344824 HSPA2P54652 639 aa21.12■□□□□ 0.97
TPM4-202ENST00000344824 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
TPM4-202ENST00000344824 ZMYM3Q14202 1370 aa21.12■□□□□ 0.97
TPM4-202ENST00000344824 ZC3H13Q5T200 1668 aaKnown RBP21.11■□□□□ 0.97
TPM4-202ENST00000344824 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
TPM4-202ENST00000344824 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
TPM4-202ENST00000344824 FAM135AQ9P2D6 1515 aa21.1■□□□□ 0.97
TPM4-202ENST00000344824 MROH1Q8NDA8 1641 aa21.09■□□□□ 0.97
TPM4-202ENST00000344824 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.97
TPM4-202ENST00000344824 ERBINQ96RT1 1412 aa21.08■□□□□ 0.96
TPM4-202ENST00000344824 WASHC2CQ9Y4E1 1318 aa21.07■□□□□ 0.96
TPM4-202ENST00000344824 PPP6R1Q9UPN7 881 aa21.06■□□□□ 0.96
TPM4-202ENST00000344824 NPATQ14207 1427 aa21.05■□□□□ 0.96
TPM4-202ENST00000344824 CAMSAP1Q5T5Y3 1602 aa21.05■□□□□ 0.96
TPM4-202ENST00000344824 ADGRL2O95490 1459 aa21.05■□□□□ 0.96
TPM4-202ENST00000344824 ITGAEP38570 1179 aa21.04■□□□□ 0.96
TPM4-202ENST00000344824 ABCC3O15438 1527 aa21.04■□□□□ 0.96
TPM4-202ENST00000344824 ZNF142P52746 1687 aaPredicted RBP21.04■□□□□ 0.96
TPM4-202ENST00000344824 PRDM15P57071 1507 aaPredicted RBP21.04■□□□□ 0.96
TPM4-202ENST00000344824 DEPDC5O75140 1603 aa21.03■□□□□ 0.96
TPM4-202ENST00000344824 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
TPM4-202ENST00000344824 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
TPM4-202ENST00000344824 PZPP20742 1482 aa21.01■□□□□ 0.95
TPM4-202ENST00000344824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21■□□□□ 0.959e-7■■□□□ 13.1
TPM4-202ENST00000344824 CEP170BQ9Y4F5 1589 aaPredicted RBP21■□□□□ 0.95
TPM4-202ENST00000344824 STRCQ7RTU9 1775 aa20.98■□□□□ 0.95
TPM4-202ENST00000344824 KANK1Q14678 1352 aa20.96■□□□□ 0.95
TPM4-202ENST00000344824 FBXO31Q5XUX0 539 aaPredicted RBP20.95■□□□□ 0.95
TPM4-202ENST00000344824 TNRQ92752 1358 aa20.95■□□□□ 0.94
TPM4-202ENST00000344824 ANKRD50Q9ULJ7 1429 aa20.94■□□□□ 0.94
TPM4-202ENST00000344824 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
TPM4-202ENST00000344824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.948e-48■■■■□ 23.3
TPM4-202ENST00000344824 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
TPM4-202ENST00000344824 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
TPM4-202ENST00000344824 ERVK-7P63135 1459 aa20.9■□□□□ 0.94
TPM4-202ENST00000344824 ROCK1Q13464 1354 aa20.89■□□□□ 0.93
TPM4-202ENST00000344824 UNC13BO14795 1591 aa20.89■□□□□ 0.93
TPM4-202ENST00000344824 VWDEQ8N2E2 1590 aa20.88■□□□□ 0.93
TPM4-202ENST00000344824 POLR1AO95602 1720 aaPredicted RBP20.88■□□□□ 0.93
TPM4-202ENST00000344824 EFCAB6Q5THR3 1501 aa20.86■□□□□ 0.93
TPM4-202ENST00000344824 GCC2Q8IWJ2 1684 aa20.86■□□□□ 0.93
TPM4-202ENST00000344824 LMTK2Q8IWU2 1503 aa20.85■□□□□ 0.93
TPM4-202ENST00000344824 TET3O43151 1660 aa20.85■□□□□ 0.93
TPM4-202ENST00000344824 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
TPM4-202ENST00000344824 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
TPM4-202ENST00000344824 TRIM26Q12899 539 aaPredicted RBP20.84■□□□□ 0.93
TPM4-202ENST00000344824 ARHGAP31Q2M1Z3 1444 aa20.82■□□□□ 0.92
TPM4-202ENST00000344824 PLA2R1Q13018 1463 aa20.82■□□□□ 0.92
TPM4-202ENST00000344824 IQGAP3Q86VI3 1631 aa20.81■□□□□ 0.92
TPM4-202ENST00000344824 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
TPM4-202ENST00000344824 PIK3C2BO00750 1634 aa20.79■□□□□ 0.92
TPM4-202ENST00000344824 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
TPM4-202ENST00000344824 NCKAP5LQ9HCH0 1330 aa20.79■□□□□ 0.92
TPM4-202ENST00000344824 E9PCH4 1651 aa20.78■□□□□ 0.92
TPM4-202ENST00000344824 SYNMO15061 1565 aa20.77■□□□□ 0.92
TPM4-202ENST00000344824 PTPRTO14522 1441 aa20.77■□□□□ 0.91
TPM4-202ENST00000344824 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
TPM4-202ENST00000344824 NEURL4Q96JN8 1562 aa20.74■□□□□ 0.91
TPM4-202ENST00000344824 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
TPM4-202ENST00000344824 NUP155O75694 1391 aa20.73■□□□□ 0.91
TPM4-202ENST00000344824 PKD2Q13563 968 aa20.73■□□□□ 0.91
TPM4-202ENST00000344824 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
TPM4-202ENST00000344824 NAIPQ13075 1403 aa20.72■□□□□ 0.91
TPM4-202ENST00000344824 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
TPM4-202ENST00000344824 STAG3Q9UJ98 1225 aa20.7■□□□□ 0.9
TPM4-202ENST00000344824 IQGAP1P46940 1657 aa20.7■□□□□ 0.9
TPM4-202ENST00000344824 NOS1P29475 1434 aa20.69■□□□□ 0.9
TPM4-202ENST00000344824 HFM1A2PYH4 1435 aa20.69■□□□□ 0.9
TPM4-202ENST00000344824 ADGRB3O60242 1522 aa20.68■□□□□ 0.9
TPM4-202ENST00000344824 SPHKAPQ2M3C7 1700 aa20.68■□□□□ 0.9
TPM4-202ENST00000344824 KDM5AP29375 1690 aaKnown RBP20.68■□□□□ 0.9
TPM4-202ENST00000344824 ANKLE2Q86XL3 938 aa20.67■□□□□ 0.9
TPM4-202ENST00000344824 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
TPM4-202ENST00000344824 ILDR1Q86SU0 546 aaPredicted RBP20.63■□□□□ 0.89
TPM4-202ENST00000344824 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
TPM4-202ENST00000344824 SLIT1O75093 1534 aa20.62■□□□□ 0.89
TPM4-202ENST00000344824 IDI1Q13907 227 aa20.62■□□□□ 0.89
TPM4-202ENST00000344824 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
TPM4-202ENST00000344824 ZNF335Q9H4Z2 1342 aaPredicted RBP20.62■□□□□ 0.89
TPM4-202ENST00000344824 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
TPM4-202ENST00000344824 LTBP4Q8N2S1 1624 aa20.62■□□□□ 0.89
TPM4-202ENST00000344824 CHGAP10645 457 aaKnown RBP20.6■□□□□ 0.89
TPM4-202ENST00000344824 ARHGAP23Q9P227 1491 aa20.6■□□□□ 0.89
TPM4-202ENST00000344824 MED14O60244 1454 aa20.59■□□□□ 0.89
TPM4-202ENST00000344824 TMEM131LA2VDJ0 1609 aa20.58■□□□□ 0.89
TPM4-202ENST00000344824 SLC52A1Q9NWF4 448 aa20.58■□□□□ 0.88
TPM4-202ENST00000344824 TMEM2Q9UHN6 1383 aa20.58■□□□□ 0.88
TPM4-202ENST00000344824 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
TPM4-202ENST00000344824 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
TPM4-202ENST00000344824 FBXO41Q8TF61 875 aa20.56■□□□□ 0.88
TPM4-202ENST00000344824 KIF1BO60333 1816 aa20.55■□□□□ 0.88
TPM4-202ENST00000344824 LTKP29376 864 aa20.53■□□□□ 0.88
TPM4-202ENST00000344824 CLTCL1P53675 1640 aa20.53■□□□□ 0.88
TPM4-202ENST00000344824 STRCP1A6NGW2 1772 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms