RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 ZMYM4Q5VZL5 1548 aa11.75□□□□□ -0.53
HMGCR-202ENST00000343975 ZEB1P37275 1124 aaPredicted RBP11.75□□□□□ -0.53
HMGCR-202ENST00000343975 BCANQ96GW7 911 aa11.75□□□□□ -0.53
HMGCR-202ENST00000343975 CNTLNQ9NXG0 1405 aa11.74□□□□□ -0.53
HMGCR-202ENST00000343975 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
HMGCR-202ENST00000343975 ZNF326Q5BKZ1 582 aaKnown RBP11.74□□□□□ -0.53
HMGCR-202ENST00000343975 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
HMGCR-202ENST00000343975 ARHGEF40Q8TER5 1519 aa11.72□□□□□ -0.53
HMGCR-202ENST00000343975 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
HMGCR-202ENST00000343975 PPP1R15AO75807 674 aaPredicted RBP11.72□□□□□ -0.53
HMGCR-202ENST00000343975 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.53
HMGCR-202ENST00000343975 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.54
HMGCR-202ENST00000343975 TONSLQ96HA7 1378 aa11.7□□□□□ -0.54
HMGCR-202ENST00000343975 RICTORQ6R327 1708 aa11.7□□□□□ -0.54
HMGCR-202ENST00000343975 DIP2CQ9Y2E4 1556 aa11.69□□□□□ -0.54
HMGCR-202ENST00000343975 CLSPNQ9HAW4 1339 aa11.69□□□□□ -0.54
HMGCR-202ENST00000343975 CROCC2H7BZ55 1655 aa11.69□□□□□ -0.54
HMGCR-202ENST00000343975 CCDC144AA2RUR9 1427 aa11.67□□□□□ -0.54
HMGCR-202ENST00000343975 SLC52A1Q9NWF4 448 aa11.67□□□□□ -0.54
HMGCR-202ENST00000343975 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
HMGCR-202ENST00000343975 AGLP35573 1532 aa11.67□□□□□ -0.54
HMGCR-202ENST00000343975 FOXD1Q16676 465 aa11.67□□□□□ -0.54
HMGCR-202ENST00000343975 RGL3Q3MIN7 710 aa11.66□□□□□ -0.54
HMGCR-202ENST00000343975 ABCA6Q8N139 1617 aa11.66□□□□□ -0.54
HMGCR-202ENST00000343975 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
HMGCR-202ENST00000343975 ZMYM3Q14202 1370 aa11.65□□□□□ -0.54
HMGCR-202ENST00000343975 FRMPD1Q5SYB0 1578 aa11.65□□□□□ -0.54
HMGCR-202ENST00000343975 CEBPAP49715 358 aaPredicted RBP11.64□□□□□ -0.55
HMGCR-202ENST00000343975 GCC2Q8IWJ2 1684 aa11.64□□□□□ -0.55
HMGCR-202ENST00000343975 EIF2AK4Q9P2K8 1649 aaKnown RBP11.63□□□□□ -0.55
HMGCR-202ENST00000343975 TNRQ92752 1358 aa11.63□□□□□ -0.55
HMGCR-202ENST00000343975 THEMISQ8N1K5 641 aaPredicted RBP11.63□□□□□ -0.55
HMGCR-202ENST00000343975 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
HMGCR-202ENST00000343975 REREQ9P2R6 1566 aa11.62□□□□□ -0.55
HMGCR-202ENST00000343975 FAM135AQ9P2D6 1515 aa11.62□□□□□ -0.55
HMGCR-202ENST00000343975 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
HMGCR-202ENST00000343975 DHX57Q6P158 1386 aaKnown RBP11.61□□□□□ -0.55
HMGCR-202ENST00000343975 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
HMGCR-202ENST00000343975 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.6□□□□□ -0.55
HMGCR-202ENST00000343975 TIMELESSQ9UNS1 1208 aa11.59□□□□□ -0.55
HMGCR-202ENST00000343975 SIN3AQ96ST3 1273 aa11.58□□□□□ -0.55
HMGCR-202ENST00000343975 RPRD2Q5VT52 1461 aaKnown RBP11.58□□□□□ -0.56
HMGCR-202ENST00000343975 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
HMGCR-202ENST00000343975 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
HMGCR-202ENST00000343975 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
HMGCR-202ENST00000343975 ABCC3O15438 1527 aa11.56□□□□□ -0.56
HMGCR-202ENST00000343975 UHRF1BP1Q6BDS2 1440 aa11.56□□□□□ -0.56
HMGCR-202ENST00000343975 PRDM15P57071 1507 aaPredicted RBP11.56□□□□□ -0.56
HMGCR-202ENST00000343975 IDI1Q13907 227 aa11.56□□□□□ -0.56
HMGCR-202ENST00000343975 ARHGAP31Q2M1Z3 1444 aa11.55□□□□□ -0.56
HMGCR-202ENST00000343975 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
HMGCR-202ENST00000343975 NPATQ14207 1427 aa11.55□□□□□ -0.56
HMGCR-202ENST00000343975 UNC13BO14795 1591 aa11.54□□□□□ -0.56
HMGCR-202ENST00000343975 PZPP20742 1482 aa11.54□□□□□ -0.56
HMGCR-202ENST00000343975 RPGRIP1LQ68CZ1 1315 aa11.54□□□□□ -0.56
HMGCR-202ENST00000343975 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
HMGCR-202ENST00000343975 RNF17Q9BXT8 1623 aaKnown RBP11.53□□□□□ -0.56
HMGCR-202ENST00000343975 SENP3Q9H4L4 574 aaPredicted RBP11.53□□□□□ -0.56
HMGCR-202ENST00000343975 LMTK2Q8IWU2 1503 aa11.52□□□□□ -0.57
HMGCR-202ENST00000343975 ANKRD30BQ9BXX2 1392 aa11.52□□□□□ -0.57
HMGCR-202ENST00000343975 TET3O43151 1660 aa11.52□□□□□ -0.57
HMGCR-202ENST00000343975 ZC3H13Q5T200 1668 aaKnown RBP11.52□□□□□ -0.57
HMGCR-202ENST00000343975 IQGAP3Q86VI3 1631 aa11.52□□□□□ -0.57
HMGCR-202ENST00000343975 EFCAB6Q5THR3 1501 aa11.52□□□□□ -0.57
HMGCR-202ENST00000343975 PTPRMP28827 1452 aa11.5□□□□□ -0.57
HMGCR-202ENST00000343975 ERVK-7P63135 1459 aa11.5□□□□□ -0.57
HMGCR-202ENST00000343975 NLRP1Q9C000 1473 aa11.5□□□□□ -0.57
HMGCR-202ENST00000343975 NUTM2DQ5VT03 806 aaPredicted RBP11.5□□□□□ -0.57
HMGCR-202ENST00000343975 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
HMGCR-202ENST00000343975 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
HMGCR-202ENST00000343975 CLTCQ00610 1675 aaKnown RBP11.5□□□□□ -0.57
HMGCR-202ENST00000343975 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
HMGCR-202ENST00000343975 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
HMGCR-202ENST00000343975 RIMS1Q86UR5 1692 aaKnown RBP11.49□□□□□ -0.57
HMGCR-202ENST00000343975 MADDQ8WXG6 1647 aa11.48□□□□□ -0.57
HMGCR-202ENST00000343975 C14orf37Q86TY3 774 aa11.48□□□□□ -0.57
HMGCR-202ENST00000343975 CFAP65Q6ZU64 1925 aaKnown RBP11.47□□□□□ -0.57
HMGCR-202ENST00000343975 KDM4FA0A1W2PPD8 638 aa11.47□□□□□ -0.57
HMGCR-202ENST00000343975 DEPDC5O75140 1603 aa11.47□□□□□ -0.57
HMGCR-202ENST00000343975 CEP152O94986 1710 aa11.47□□□□□ -0.57
HMGCR-202ENST00000343975 CAMSAP1Q5T5Y3 1602 aa11.47□□□□□ -0.57
HMGCR-202ENST00000343975 NOS1P29475 1434 aa11.46□□□□□ -0.58
HMGCR-202ENST00000343975 CARD11Q9BXL7 1154 aa11.45□□□□□ -0.58
HMGCR-202ENST00000343975 POGKQ9P215 609 aa11.45□□□□□ -0.58
HMGCR-202ENST00000343975 PTPRTO14522 1441 aa11.45□□□□□ -0.58
HMGCR-202ENST00000343975 HSPA2P54652 639 aa11.44□□□□□ -0.58
HMGCR-202ENST00000343975 VWDEQ8N2E2 1590 aa11.44□□□□□ -0.58
HMGCR-202ENST00000343975 SETD1BQ9UPS6 1966 aaKnown RBP11.44□□□□□ -0.58
HMGCR-202ENST00000343975 TRPM2O94759 1503 aa11.44□□□□□ -0.58
HMGCR-202ENST00000343975 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
HMGCR-202ENST00000343975 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
HMGCR-202ENST00000343975 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
HMGCR-202ENST00000343975 A2ML1A8K2U0 1454 aa11.43□□□□□ -0.58
HMGCR-202ENST00000343975 UGGT1Q9NYU2 1555 aa11.43□□□□□ -0.58
HMGCR-202ENST00000343975 MROH1Q8NDA8 1641 aa11.42□□□□□ -0.58
HMGCR-202ENST00000343975 STK26Q9P289 416 aa11.42□□□□□ -0.58
HMGCR-202ENST00000343975 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
HMGCR-202ENST00000343975 TMEM2Q9UHN6 1383 aa11.42□□□□□ -0.58
HMGCR-202ENST00000343975 MROH2AA6NES4 1674 aa11.41□□□□□ -0.58
HMGCR-202ENST00000343975 EIF4G2P78344 907 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms