RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.01
EGFR-202ENST00000342916 EIF2AK4Q9P2K8 1649 aaKnown RBP27.57■■■□□ 2
EGFR-202ENST00000342916 UNC13BO14795 1591 aa27.56■■■□□ 2
EGFR-202ENST00000342916 DEPDC5O75140 1603 aa27.53■■■□□ 2
EGFR-202ENST00000342916 MROH1Q8NDA8 1641 aa27.53■■■□□ 2
EGFR-202ENST00000342916 NUP155O75694 1391 aa27.53■■■□□ 2
EGFR-202ENST00000342916 NEUROD1Q13562 356 aa27.51■■□□□ 1.99
EGFR-202ENST00000342916 PZPP20742 1482 aa27.51■■□□□ 1.99
EGFR-202ENST00000342916 REREQ9P2R6 1566 aa27.51■■□□□ 1.99
EGFR-202ENST00000342916 BCORL1Q5H9F3 1711 aa27.5■■□□□ 1.99
EGFR-202ENST00000342916 GGT6Q6P531 493 aa27.49■■□□□ 1.99
EGFR-202ENST00000342916 RNF17Q9BXT8 1623 aaKnown RBP27.49■■□□□ 1.99
EGFR-202ENST00000342916 ZNF316A6NFI3 1004 aaPredicted RBP27.48■■□□□ 1.99
EGFR-202ENST00000342916 FOXD1Q16676 465 aa27.46■■□□□ 1.99
EGFR-202ENST00000342916 MPHOSPH9Q99550 1183 aa27.46■■□□□ 1.99
EGFR-202ENST00000342916 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
EGFR-202ENST00000342916 KDM5DQ9BY66 1539 aa27.46■■□□□ 1.99
EGFR-202ENST00000342916 FAM135AQ9P2D6 1515 aa27.46■■□□□ 1.99
EGFR-202ENST00000342916 ACIN1Q9UKV3 1341 aaKnown RBP27.45■■□□□ 1.99
EGFR-202ENST00000342916 IQGAP3Q86VI3 1631 aa27.44■■□□□ 1.98
EGFR-202ENST00000342916 SLC4A1APQ9BWU0 796 aaKnown RBP27.44■■□□□ 1.98
EGFR-202ENST00000342916 MLECQ14165 292 aa27.44■■□□□ 1.98
EGFR-202ENST00000342916 CEP152O94986 1710 aa27.43■■□□□ 1.98
EGFR-202ENST00000342916 AGLP35573 1532 aa27.43■■□□□ 1.98
EGFR-202ENST00000342916 ARID4BQ4LE39 1312 aaPredicted RBP27.42■■□□□ 1.98
EGFR-202ENST00000342916 TIMELESSQ9UNS1 1208 aa27.41■■□□□ 1.98
EGFR-202ENST00000342916 VWDEQ8N2E2 1590 aa27.41■■□□□ 1.98
EGFR-202ENST00000342916 PKD2Q13563 968 aa27.36■■□□□ 1.97
EGFR-202ENST00000342916 KANK1Q14678 1352 aa27.35■■□□□ 1.97
EGFR-202ENST00000342916 ABCC3O15438 1527 aa27.33■■□□□ 1.97
EGFR-202ENST00000342916 E9PCH4 1651 aa27.32■■□□□ 1.96
EGFR-202ENST00000342916 WASHC2CQ9Y4E1 1318 aa27.32■■□□□ 1.96
EGFR-202ENST00000342916 TONSLQ96HA7 1378 aa27.32■■□□□ 1.96
EGFR-202ENST00000342916 TET3O43151 1660 aa27.31■■□□□ 1.96
EGFR-202ENST00000342916 CFAP65Q6ZU64 1925 aaKnown RBP27.31■■□□□ 1.96
EGFR-202ENST00000342916 CLTCQ00610 1675 aaKnown RBP27.3■■□□□ 1.96
EGFR-202ENST00000342916 ANKRD30BQ9BXX2 1392 aa27.3■■□□□ 1.96
EGFR-202ENST00000342916 DIEXFQ68CQ4 756 aaKnown RBP27.29■■□□□ 1.96
EGFR-202ENST00000342916 CAMSAP1Q5T5Y3 1602 aa27.28■■□□□ 1.96
EGFR-202ENST00000342916 PPP1R15AO75807 674 aaPredicted RBP27.28■■□□□ 1.96
EGFR-202ENST00000342916 EFCAB6Q5THR3 1501 aa27.27■■□□□ 1.96
EGFR-202ENST00000342916 LMTK2Q8IWU2 1503 aa27.26■■□□□ 1.95
EGFR-202ENST00000342916 ZC3H13Q5T200 1668 aaKnown RBP27.26■■□□□ 1.95
EGFR-202ENST00000342916 NPATQ14207 1427 aa27.2■■□□□ 1.95
EGFR-202ENST00000342916 RPRD2Q5VT52 1461 aaKnown RBP27.2■■□□□ 1.95
EGFR-202ENST00000342916 FER1L4A9Z1Z3 1794 aa27.2■■□□□ 1.94
EGFR-202ENST00000342916 PLA2R1Q13018 1463 aa27.19■■□□□ 1.94
EGFR-202ENST00000342916 SPHKAPQ2M3C7 1700 aa27.17■■□□□ 1.94
EGFR-202ENST00000342916 MADDQ8WXG6 1647 aa27.15■■□□□ 1.94
EGFR-202ENST00000342916 ESF1Q9H501 851 aaKnown RBP27.14■■□□□ 1.94
EGFR-202ENST00000342916 PPP6R1Q9UPN7 881 aa27.14■■□□□ 1.94
EGFR-202ENST00000342916 FBXO31Q5XUX0 539 aaPredicted RBP27.12■■□□□ 1.93
EGFR-202ENST00000342916 UGGT1Q9NYU2 1555 aa27.12■■□□□ 1.93
EGFR-202ENST00000342916 ADAMTSL3P82987 1691 aa27.1■■□□□ 1.93
EGFR-202ENST00000342916 ZMYM3Q14202 1370 aa27.1■■□□□ 1.93
EGFR-202ENST00000342916 ARHGAP31Q2M1Z3 1444 aa27.1■■□□□ 1.93
EGFR-202ENST00000342916 RIMS1Q86UR5 1692 aaKnown RBP27.1■■□□□ 1.93
EGFR-202ENST00000342916 PREX1Q8TCU6 1659 aa27.1■■□□□ 1.93
EGFR-202ENST00000342916 PLPPR3Q6T4P5 718 aa27.09■■□□□ 1.93
EGFR-202ENST00000342916 PTPRTO14522 1441 aa27.09■■□□□ 1.93
EGFR-202ENST00000342916 CEBPAP49715 358 aaPredicted RBP27.08■■□□□ 1.92
EGFR-202ENST00000342916 L3MBTL2Q969R5 705 aa27.08■■□□□ 1.92
EGFR-202ENST00000342916 TRPM2O94759 1503 aa27.07■■□□□ 1.92
EGFR-202ENST00000342916 MROH2AA6NES4 1674 aa27.07■■□□□ 1.92
EGFR-202ENST00000342916 C3P01024 1663 aa27.07■■□□□ 1.92
EGFR-202ENST00000342916 SYNMO15061 1565 aa27.06■■□□□ 1.92
EGFR-202ENST00000342916 CLTCL1P53675 1640 aa27.06■■□□□ 1.92
EGFR-202ENST00000342916 CCDC144AA2RUR9 1427 aa27.04■■□□□ 1.92
EGFR-202ENST00000342916 CNTLNQ9NXG0 1405 aa27.04■■□□□ 1.92
EGFR-202ENST00000342916 NOS1P29475 1434 aa27.03■■□□□ 1.92
EGFR-202ENST00000342916 ERVK-7P63135 1459 aa27.02■■□□□ 1.92
EGFR-202ENST00000342916 SPATA31D1Q6ZQQ2 1576 aa26.97■■□□□ 1.91
EGFR-202ENST00000342916 PIK3C2BO00750 1634 aa26.95■■□□□ 1.91
EGFR-202ENST00000342916 KIF1BO60333 1816 aa26.92■■□□□ 1.9
EGFR-202ENST00000342916 IDI1Q13907 227 aa26.92■■□□□ 1.9
EGFR-202ENST00000342916 RGL3Q3MIN7 710 aa26.92■■□□□ 1.9
EGFR-202ENST00000342916 MYO5BQ9ULV0 1848 aa26.91■■□□□ 1.9
EGFR-202ENST00000342916 HIRIP3Q9BW71 556 aaPredicted RBP26.9■■□□□ 1.9
EGFR-202ENST00000342916 NBPF8Q3BBV2 869 aa26.9■■□□□ 1.9
EGFR-202ENST00000342916 SPATA31E1Q6ZUB1 1445 aa26.88■■□□□ 1.89
EGFR-202ENST00000342916 KDM4FA0A1W2PPD8 638 aa26.88■■□□□ 1.89
EGFR-202ENST00000342916 CHGAP10645 457 aaKnown RBP26.88■■□□□ 1.89
EGFR-202ENST00000342916 TNRQ92752 1358 aa26.88■■□□□ 1.89
EGFR-202ENST00000342916 PTPRMP28827 1452 aa26.87■■□□□ 1.89
EGFR-202ENST00000342916 MIER1Q8N108 512 aa26.86■■□□□ 1.89
EGFR-202ENST00000342916 ADGRB3O60242 1522 aa26.83■■□□□ 1.89
EGFR-202ENST00000342916 SLC52A1Q9NWF4 448 aa26.83■■□□□ 1.89
EGFR-202ENST00000342916 TMEM131LA2VDJ0 1609 aa26.82■■□□□ 1.88
EGFR-202ENST00000342916 DCAF11Q8TEB1 546 aa26.8■■□□□ 1.88
EGFR-202ENST00000342916 KDM2AQ9Y2K7 1162 aa26.8■■□□□ 1.88
EGFR-202ENST00000342916 MYO3AQ8NEV4 1616 aa26.79■■□□□ 1.88
EGFR-202ENST00000342916 UHRF1BP1Q6BDS2 1440 aa26.77■■□□□ 1.88
EGFR-202ENST00000342916 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
EGFR-202ENST00000342916 HSPA5P11021 654 aaKnown RBP26.75■■□□□ 1.87
EGFR-202ENST00000342916 UBR1Q8IWV7 1749 aa26.75■■□□□ 1.87
EGFR-202ENST00000342916 IFT172Q9UG01 1749 aa26.75■■□□□ 1.87
EGFR-202ENST00000342916 STAG3Q9UJ98 1225 aa26.74■■□□□ 1.87
EGFR-202ENST00000342916 NUTM2DQ5VT03 806 aaPredicted RBP26.74■■□□□ 1.87
EGFR-202ENST00000342916 NEURL4Q96JN8 1562 aa26.73■■□□□ 1.87
EGFR-202ENST00000342916 A2ML1A8K2U0 1454 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms