RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 MED1Q15648 1581 aaPredicted RBP27.52■■■□□ 2
TRA2B-202ENST00000342294 SHANK2Q9UPX8 1470 aa27.51■■■□□ 2
TRA2B-202ENST00000342294 MTUS2Q5JR59 1369 aa27.51■■□□□ 1.99
TRA2B-202ENST00000342294 TNRQ92752 1358 aa27.51■■□□□ 1.99
TRA2B-202ENST00000342294 PIP4K2BP78356 416 aa27.51■■□□□ 1.99
TRA2B-202ENST00000342294 SCAF1Q9H7N4 1312 aaKnown RBP27.49■■□□□ 1.99
TRA2B-202ENST00000342294 PZPP20742 1482 aa27.46■■□□□ 1.99
TRA2B-202ENST00000342294 TIAM1Q13009 1591 aa27.46■■□□□ 1.99
TRA2B-202ENST00000342294 POLR1AO95602 1720 aaPredicted RBP27.44■■□□□ 1.98
TRA2B-202ENST00000342294 KIF3BO15066 747 aa27.44■■□□□ 1.98
TRA2B-202ENST00000342294 ANKLE2Q86XL3 938 aa27.44■■□□□ 1.98
TRA2B-202ENST00000342294 FAM135AQ9P2D6 1515 aa27.42■■□□□ 1.98
TRA2B-202ENST00000342294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.42■■□□□ 1.985e-7■□□□□ 8.4
TRA2B-202ENST00000342294 VWDEQ8N2E2 1590 aa27.42■■□□□ 1.98
TRA2B-202ENST00000342294 THEMISQ8N1K5 641 aaPredicted RBP27.41■■□□□ 1.98
TRA2B-202ENST00000342294 KDM5DQ9BY66 1539 aa27.41■■□□□ 1.98
TRA2B-202ENST00000342294 ALKQ9UM73 1620 aa27.4■■□□□ 1.98
TRA2B-202ENST00000342294 MIA2Q96PC5 1412 aa27.4■■□□□ 1.98
TRA2B-202ENST00000342294 MED14O60244 1454 aa27.39■■□□□ 1.98
TRA2B-202ENST00000342294 CEP162Q5TB80 1403 aa27.39■■□□□ 1.97
TRA2B-202ENST00000342294 WASHC2CQ9Y4E1 1318 aa27.38■■□□□ 1.97
TRA2B-202ENST00000342294 NLRP1Q9C000 1473 aa27.38■■□□□ 1.97
TRA2B-202ENST00000342294 EHBP1L1Q8N3D4 1523 aa27.36■■□□□ 1.97
TRA2B-202ENST00000342294 NPHP4O75161 1426 aaPredicted RBP27.36■■□□□ 1.97
TRA2B-202ENST00000342294 CCDC141Q6ZP82 1450 aa27.34■■□□□ 1.97
TRA2B-202ENST00000342294 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
TRA2B-202ENST00000342294 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
TRA2B-202ENST00000342294 UGGT1Q9NYU2 1555 aa27.33■■□□□ 1.97
TRA2B-202ENST00000342294 PHF23Q9BUL5 403 aaPredicted RBP27.28■■□□□ 1.96
TRA2B-202ENST00000342294 CAMSAP2Q08AD1 1489 aa27.27■■□□□ 1.96
TRA2B-202ENST00000342294 LRRC7Q96NW7 1537 aa27.26■■□□□ 1.95
TRA2B-202ENST00000342294 NCOA2Q15596 1464 aa27.23■■□□□ 1.95
TRA2B-202ENST00000342294 IQGAP1P46940 1657 aa27.23■■□□□ 1.95
TRA2B-202ENST00000342294 STRCP1A6NGW2 1772 aa27.21■■□□□ 1.95
TRA2B-202ENST00000342294 ARHGEF5Q12774 1597 aa27.2■■□□□ 1.94
TRA2B-202ENST00000342294 TSPY4P0CV99 314 aa27.19■■□□□ 1.94
TRA2B-202ENST00000342294 TSPY10P0CW01 314 aa27.19■■□□□ 1.94
TRA2B-202ENST00000342294 ABCC3O15438 1527 aa27.18■■□□□ 1.94
TRA2B-202ENST00000342294 RNF17Q9BXT8 1623 aaKnown RBP27.16■■□□□ 1.94
TRA2B-202ENST00000342294 SYNMO15061 1565 aa27.15■■□□□ 1.94
TRA2B-202ENST00000342294 ERVK-7P63135 1459 aa27.15■■□□□ 1.94
TRA2B-202ENST00000342294 SENP3Q9H4L4 574 aaPredicted RBP27.14■■□□□ 1.94
TRA2B-202ENST00000342294 RGS17Q9UGC6 210 aaPredicted RBP27.14■■□□□ 1.94
TRA2B-202ENST00000342294 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
TRA2B-202ENST00000342294 SCAF11Q99590 1463 aaKnown RBP27.09■■□□□ 1.93
TRA2B-202ENST00000342294 LTKP29376 864 aa27.08■■□□□ 1.93
TRA2B-202ENST00000342294 MAST1Q9Y2H9 1570 aa27.08■■□□□ 1.93
TRA2B-202ENST00000342294 MROH1Q8NDA8 1641 aa27.08■■□□□ 1.93
TRA2B-202ENST00000342294 ARHGAP23Q9P227 1491 aa27.06■■□□□ 1.92
TRA2B-202ENST00000342294 UBR1Q8IWV7 1749 aa27.05■■□□□ 1.92
TRA2B-202ENST00000342294 EIF2AK4Q9P2K8 1649 aaKnown RBP27.05■■□□□ 1.92
TRA2B-202ENST00000342294 SLIT1O75093 1534 aa27.04■■□□□ 1.92
TRA2B-202ENST00000342294 TXNDC2Q86VQ3 553 aa27.03■■□□□ 1.92
TRA2B-202ENST00000342294 FAM135BQ49AJ0 1406 aa26.99■■□□□ 1.91
TRA2B-202ENST00000342294 ARHGAP31Q2M1Z3 1444 aa26.99■■□□□ 1.91
TRA2B-202ENST00000342294 LRRC9Q6ZRR7 1453 aa26.97■■□□□ 1.91
TRA2B-202ENST00000342294 XIRP1Q702N8 1843 aaKnown RBP26.97■■□□□ 1.91
TRA2B-202ENST00000342294 CEP152O94986 1710 aa26.96■■□□□ 1.91
TRA2B-202ENST00000342294 EID1Q9Y6B2 187 aa26.95■■□□□ 1.9
TRA2B-202ENST00000342294 DUOX2Q9NRD8 1548 aa26.94■■□□□ 1.9
TRA2B-202ENST00000342294 POTEAQ6S8J7 498 aa26.93■■□□□ 1.9
TRA2B-202ENST00000342294 TMEM2Q9UHN6 1383 aa26.92■■□□□ 1.9
TRA2B-202ENST00000342294 CFAP65Q6ZU64 1925 aaKnown RBP26.92■■□□□ 1.9
TRA2B-202ENST00000342294 PRDM15P57071 1507 aaPredicted RBP26.9■■□□□ 1.9
TRA2B-202ENST00000342294 TMEM94Q12767 1356 aa26.89■■□□□ 1.9
TRA2B-202ENST00000342294 MYOM3Q5VTT5 1437 aa26.89■■□□□ 1.89
TRA2B-202ENST00000342294 KCNA6P17658 529 aa26.87■■□□□ 1.89
TRA2B-202ENST00000342294 KANK4Q5T7N3 995 aaPredicted RBP26.87■■□□□ 1.89
TRA2B-202ENST00000342294 KIF15Q9NS87 1388 aa26.85■■□□□ 1.89
TRA2B-202ENST00000342294 PIK3C2BO00750 1634 aa26.85■■□□□ 1.89
TRA2B-202ENST00000342294 ERBINQ96RT1 1412 aa26.84■■□□□ 1.89
TRA2B-202ENST00000342294 VPS8Q8N3P4 1428 aa26.83■■□□□ 1.89
TRA2B-202ENST00000342294 MAP3K1Q13233 1512 aa26.83■■□□□ 1.89
TRA2B-202ENST00000342294 IDI1Q13907 227 aa26.82■■□□□ 1.88
TRA2B-202ENST00000342294 TET3O43151 1660 aa26.81■■□□□ 1.88
TRA2B-202ENST00000342294 PROSER2Q86WR7 435 aaPredicted RBP26.8■■□□□ 1.88
TRA2B-202ENST00000342294 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
TRA2B-202ENST00000342294 STAG3Q9UJ98 1225 aa26.8■■□□□ 1.88
TRA2B-202ENST00000342294 ABCC5O15440 1437 aa26.8■■□□□ 1.88
TRA2B-202ENST00000342294 EFCAB6Q5THR3 1501 aa26.8■■□□□ 1.88
TRA2B-202ENST00000342294 SLC26A8Q96RN1 970 aa26.79■■□□□ 1.88
TRA2B-202ENST00000342294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.79■■□□□ 1.888e-8■■□□□ 12.1
TRA2B-202ENST00000342294 ROBO1Q9Y6N7 1651 aa26.79■■□□□ 1.88
TRA2B-202ENST00000342294 RBM33Q96EV2 1170 aaKnown RBP26.78■■□□□ 1.88
TRA2B-202ENST00000342294 KDM5AP29375 1690 aaKnown RBP26.78■■□□□ 1.88
TRA2B-202ENST00000342294 LMTK2Q8IWU2 1503 aa26.75■■□□□ 1.87
TRA2B-202ENST00000342294 KANK1Q14678 1352 aa26.74■■□□□ 1.87
TRA2B-202ENST00000342294 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
TRA2B-202ENST00000342294 NOS1P29475 1434 aa26.72■■□□□ 1.87
TRA2B-202ENST00000342294 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
TRA2B-202ENST00000342294 SLAIN2Q9P270 581 aa26.7■■□□□ 1.86
TRA2B-202ENST00000342294 CROCC2H7BZ55 1655 aa26.7■■□□□ 1.86
TRA2B-202ENST00000342294 MSH6P52701 1360 aa26.69■■□□□ 1.86
TRA2B-202ENST00000342294 DAPK1P53355 1430 aa26.68■■□□□ 1.86
TRA2B-202ENST00000342294 JCADQ9P266 1359 aa26.68■■□□□ 1.86
TRA2B-202ENST00000342294 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
TRA2B-202ENST00000342294 SLC52A1Q9NWF4 448 aa26.65■■□□□ 1.86
TRA2B-202ENST00000342294 PTPN23Q9H3S7 1636 aa26.64■■□□□ 1.85
TRA2B-202ENST00000342294 ANKRD30AQ9BXX3 1397 aa26.61■■□□□ 1.85
TRA2B-202ENST00000342294 PHLPP1O60346 1717 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms