RNA–Protein interactions for RNA: ENST00000341369.11

PTMA-201, Transcript of prothymosin alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTMA, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-201ENST00000341369 KIDINS220Q9ULH0 1771 aa16.48■□□□□ 0.23
PTMA-201ENST00000341369 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
PTMA-201ENST00000341369 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
PTMA-201ENST00000341369 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
PTMA-201ENST00000341369 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
PTMA-201ENST00000341369 LRRIQ1Q96JM4 1722 aa16.43■□□□□ 0.22
PTMA-201ENST00000341369 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
PTMA-201ENST00000341369 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.222e-10■■□□□ 13.9
PTMA-201ENST00000341369 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
PTMA-201ENST00000341369 TCOF1Q13428 1488 aaKnown RBP16.41■□□□□ 0.22
PTMA-201ENST00000341369 MYO3AQ8NEV4 1616 aa16.41■□□□□ 0.22
PTMA-201ENST00000341369 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
PTMA-201ENST00000341369 CEP170BQ9Y4F5 1589 aaPredicted RBP16.4■□□□□ 0.22
PTMA-201ENST00000341369 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
PTMA-201ENST00000341369 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
PTMA-201ENST00000341369 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
PTMA-201ENST00000341369 TOM1O60784 492 aa16.39■□□□□ 0.21
PTMA-201ENST00000341369 GGT6Q6P531 493 aa16.39■□□□□ 0.21
PTMA-201ENST00000341369 CLTCQ00610 1675 aaKnown RBP16.39■□□□□ 0.21
PTMA-201ENST00000341369 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
PTMA-201ENST00000341369 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.219e-8■■■■■ 73
PTMA-201ENST00000341369 A2MP01023 1474 aa16.37■□□□□ 0.21
PTMA-201ENST00000341369 ATP7AQ04656 1500 aa16.37■□□□□ 0.21
PTMA-201ENST00000341369 SYCP2Q9BX26 1530 aa16.37■□□□□ 0.21
PTMA-201ENST00000341369 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
PTMA-201ENST00000341369 HSPA1LP34931 641 aa16.36■□□□□ 0.21
PTMA-201ENST00000341369 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
PTMA-201ENST00000341369 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
PTMA-201ENST00000341369 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
PTMA-201ENST00000341369 PLXNC1O60486 1568 aa16.35■□□□□ 0.21
PTMA-201ENST00000341369 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
PTMA-201ENST00000341369 A2ML1A8K2U0 1454 aa16.33■□□□□ 0.2
PTMA-201ENST00000341369 CPS1P31327 1500 aa16.33■□□□□ 0.2
PTMA-201ENST00000341369 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.2
PTMA-201ENST00000341369 FYCO1Q9BQS8 1478 aa16.32■□□□□ 0.2
PTMA-201ENST00000341369 INO80Q9ULG1 1556 aaPredicted RBP16.32■□□□□ 0.2
PTMA-201ENST00000341369 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
PTMA-201ENST00000341369 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
PTMA-201ENST00000341369 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
PTMA-201ENST00000341369 DNMT1P26358 1616 aaKnown RBP16.29■□□□□ 0.2
PTMA-201ENST00000341369 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.2
PTMA-201ENST00000341369 ANKLE2Q86XL3 938 aa16.27■□□□□ 0.2
PTMA-201ENST00000341369 TNRQ92752 1358 aa16.26■□□□□ 0.19
PTMA-201ENST00000341369 POLR1AO95602 1720 aaPredicted RBP16.25■□□□□ 0.19
PTMA-201ENST00000341369 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
PTMA-201ENST00000341369 NEURL4Q96JN8 1562 aa16.23■□□□□ 0.19
PTMA-201ENST00000341369 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
PTMA-201ENST00000341369 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
PTMA-201ENST00000341369 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
PTMA-201ENST00000341369 MTUS2Q5JR59 1369 aa16.22■□□□□ 0.19
PTMA-201ENST00000341369 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.19
PTMA-201ENST00000341369 KIF3BO15066 747 aa16.21■□□□□ 0.19
PTMA-201ENST00000341369 EVX2Q03828 476 aa16.21■□□□□ 0.19
PTMA-201ENST00000341369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.196e-7■■■■□ 20.1
PTMA-201ENST00000341369 PZPP20742 1482 aa16.21■□□□□ 0.19
PTMA-201ENST00000341369 FAM135AQ9P2D6 1515 aa16.2■□□□□ 0.18
PTMA-201ENST00000341369 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
PTMA-201ENST00000341369 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
PTMA-201ENST00000341369 NPHP4O75161 1426 aaPredicted RBP16.19■□□□□ 0.18
PTMA-201ENST00000341369 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
PTMA-201ENST00000341369 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
PTMA-201ENST00000341369 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
PTMA-201ENST00000341369 MED14O60244 1454 aa16.17■□□□□ 0.18
PTMA-201ENST00000341369 MIA2Q96PC5 1412 aa16.17■□□□□ 0.18
PTMA-201ENST00000341369 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
PTMA-201ENST00000341369 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
PTMA-201ENST00000341369 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
PTMA-201ENST00000341369 ALKQ9UM73 1620 aa16.13■□□□□ 0.17
PTMA-201ENST00000341369 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
PTMA-201ENST00000341369 IQGAP1P46940 1657 aa16.11■□□□□ 0.17
PTMA-201ENST00000341369 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
PTMA-201ENST00000341369 EHBP1L1Q8N3D4 1523 aa16.1■□□□□ 0.17
PTMA-201ENST00000341369 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
PTMA-201ENST00000341369 RNF17Q9BXT8 1623 aaKnown RBP16.1■□□□□ 0.17
PTMA-201ENST00000341369 SYNMO15061 1565 aa16.09■□□□□ 0.17
PTMA-201ENST00000341369 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
PTMA-201ENST00000341369 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
PTMA-201ENST00000341369 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
PTMA-201ENST00000341369 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
PTMA-201ENST00000341369 CAMSAP2Q08AD1 1489 aa16.05■□□□□ 0.16
PTMA-201ENST00000341369 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
PTMA-201ENST00000341369 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
PTMA-201ENST00000341369 ZC3H13Q5T200 1668 aaKnown RBP16.02■□□□□ 0.15
PTMA-201ENST00000341369 ABCC3O15438 1527 aa16.01■□□□□ 0.15
PTMA-201ENST00000341369 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
PTMA-201ENST00000341369 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
PTMA-201ENST00000341369 ERVK-7P63135 1459 aa16■□□□□ 0.15
PTMA-201ENST00000341369 NCOA2Q15596 1464 aa16■□□□□ 0.15
PTMA-201ENST00000341369 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
PTMA-201ENST00000341369 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
PTMA-201ENST00000341369 FAM135BQ49AJ0 1406 aa15.97■□□□□ 0.15
PTMA-201ENST00000341369 UBR1Q8IWV7 1749 aa15.96■□□□□ 0.15
PTMA-201ENST00000341369 EIF2AK4Q9P2K8 1649 aaKnown RBP15.95■□□□□ 0.14
PTMA-201ENST00000341369 SPDYE2BA6NHP3 402 aa15.95■□□□□ 0.14
PTMA-201ENST00000341369 SPDYE6P0CI01 402 aa15.95■□□□□ 0.14
PTMA-201ENST00000341369 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
PTMA-201ENST00000341369 LTKP29376 864 aa15.95■□□□□ 0.14
PTMA-201ENST00000341369 SPDYE2Q495Y8 402 aa15.95■□□□□ 0.14
PTMA-201ENST00000341369 SLIT1O75093 1534 aa15.94■□□□□ 0.14
PTMA-201ENST00000341369 POTEAQ6S8J7 498 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms