RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 DEPDC5O75140 1603 aa26.66■■□□□ 1.86
SDCBP2-201ENST00000339987 KIF3BO15066 747 aa26.65■■□□□ 1.86
SDCBP2-201ENST00000339987 UNC13BO14795 1591 aa26.65■■□□□ 1.86
SDCBP2-201ENST00000339987 MROH1Q8NDA8 1641 aa26.61■■□□□ 1.85
SDCBP2-201ENST00000339987 PRDM15P57071 1507 aaPredicted RBP26.6■■□□□ 1.85
SDCBP2-201ENST00000339987 KDM5DQ9BY66 1539 aa26.58■■□□□ 1.85
SDCBP2-201ENST00000339987 ARID4BQ4LE39 1312 aaPredicted RBP26.56■■□□□ 1.84
SDCBP2-201ENST00000339987 VWDEQ8N2E2 1590 aa26.55■■□□□ 1.84
SDCBP2-201ENST00000339987 FAM135AQ9P2D6 1515 aa26.54■■□□□ 1.84
SDCBP2-201ENST00000339987 NUP155O75694 1391 aa26.54■■□□□ 1.84
SDCBP2-201ENST00000339987 KANK1Q14678 1352 aa26.53■■□□□ 1.84
SDCBP2-201ENST00000339987 IQGAP3Q86VI3 1631 aa26.53■■□□□ 1.84
SDCBP2-201ENST00000339987 GGT6Q6P531 493 aa26.53■■□□□ 1.84
SDCBP2-201ENST00000339987 TRIM52Q96A61 297 aa26.53■■□□□ 1.84
SDCBP2-201ENST00000339987 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
SDCBP2-201ENST00000339987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.52■■□□□ 1.84
SDCBP2-201ENST00000339987 PZPP20742 1482 aa26.5■■□□□ 1.83
SDCBP2-201ENST00000339987 LMTK2Q8IWU2 1503 aa26.49■■□□□ 1.83
SDCBP2-201ENST00000339987 ZC3H13Q5T200 1668 aaKnown RBP26.49■■□□□ 1.83
SDCBP2-201ENST00000339987 ABCC3O15438 1527 aa26.47■■□□□ 1.83
SDCBP2-201ENST00000339987 MLECQ14165 292 aa26.46■■□□□ 1.83
SDCBP2-201ENST00000339987 CEP152O94986 1710 aa26.44■■□□□ 1.82
SDCBP2-201ENST00000339987 TET3O43151 1660 aa26.43■■□□□ 1.82
SDCBP2-201ENST00000339987 WASHC2CQ9Y4E1 1318 aa26.43■■□□□ 1.82
SDCBP2-201ENST00000339987 MPHOSPH9Q99550 1183 aa26.42■■□□□ 1.82
SDCBP2-201ENST00000339987 SLC4A1APQ9BWU0 796 aaKnown RBP26.4■■□□□ 1.82
SDCBP2-201ENST00000339987 CNTLNQ9NXG0 1405 aa26.4■■□□□ 1.82
SDCBP2-201ENST00000339987 DHX57Q6P158 1386 aaKnown RBP26.4■■□□□ 1.82
SDCBP2-201ENST00000339987 ADAMTSL3P82987 1691 aa26.4■■□□□ 1.82
SDCBP2-201ENST00000339987 EFCAB6Q5THR3 1501 aa26.39■■□□□ 1.82
SDCBP2-201ENST00000339987 CLTCQ00610 1675 aaKnown RBP26.38■■□□□ 1.81
SDCBP2-201ENST00000339987 CAMSAP1Q5T5Y3 1602 aa26.38■■□□□ 1.81
SDCBP2-201ENST00000339987 FER1L4A9Z1Z3 1794 aa26.37■■□□□ 1.81
SDCBP2-201ENST00000339987 ARHGAP31Q2M1Z3 1444 aa26.36■■□□□ 1.81
SDCBP2-201ENST00000339987 ESF1Q9H501 851 aaKnown RBP26.36■■□□□ 1.81
SDCBP2-201ENST00000339987 MROH2AA6NES4 1674 aa26.36■■□□□ 1.81
SDCBP2-201ENST00000339987 MADDQ8WXG6 1647 aa26.34■■□□□ 1.81
SDCBP2-201ENST00000339987 RPRD2Q5VT52 1461 aaKnown RBP26.33■■□□□ 1.81
SDCBP2-201ENST00000339987 PKD2Q13563 968 aa26.33■■□□□ 1.81
SDCBP2-201ENST00000339987 E9PCH4 1651 aa26.33■■□□□ 1.81
SDCBP2-201ENST00000339987 NPATQ14207 1427 aa26.3■■□□□ 1.8
SDCBP2-201ENST00000339987 ZMYM3Q14202 1370 aa26.28■■□□□ 1.8
SDCBP2-201ENST00000339987 RIMS1Q86UR5 1692 aaKnown RBP26.27■■□□□ 1.8
SDCBP2-201ENST00000339987 KDM4FA0A1W2PPD8 638 aa26.26■■□□□ 1.79
SDCBP2-201ENST00000339987 PTPRTO14522 1441 aa26.23■■□□□ 1.79
SDCBP2-201ENST00000339987 FOXD1Q16676 465 aa26.23■■□□□ 1.79
SDCBP2-201ENST00000339987 C3P01024 1663 aa26.22■■□□□ 1.79
SDCBP2-201ENST00000339987 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
SDCBP2-201ENST00000339987 SPHKAPQ2M3C7 1700 aa26.22■■□□□ 1.79
SDCBP2-201ENST00000339987 NOS1P29475 1434 aa26.21■■□□□ 1.79
SDCBP2-201ENST00000339987 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
SDCBP2-201ENST00000339987 PREX1Q8TCU6 1659 aa26.21■■□□□ 1.79
SDCBP2-201ENST00000339987 CCER1Q8TC90 406 aaPredicted RBP26.21■■□□□ 1.79
SDCBP2-201ENST00000339987 ERVK-7P63135 1459 aa26.2■■□□□ 1.79
SDCBP2-201ENST00000339987 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.78
SDCBP2-201ENST00000339987 PLA2R1Q13018 1463 aa26.2■■□□□ 1.78
SDCBP2-201ENST00000339987 TRPM2O94759 1503 aa26.19■■□□□ 1.78
SDCBP2-201ENST00000339987 PTPRMP28827 1452 aa26.16■■□□□ 1.78
SDCBP2-201ENST00000339987 FBXO31Q5XUX0 539 aaPredicted RBP26.15■■□□□ 1.78
SDCBP2-201ENST00000339987 CFAP65Q6ZU64 1925 aaKnown RBP26.15■■□□□ 1.78
SDCBP2-201ENST00000339987 SYNMO15061 1565 aa26.14■■□□□ 1.78
SDCBP2-201ENST00000339987 CEBPAP49715 358 aaPredicted RBP26.13■■□□□ 1.77
SDCBP2-201ENST00000339987 CCDC144AA2RUR9 1427 aa26.1■■□□□ 1.77
SDCBP2-201ENST00000339987 PIK3C2BO00750 1634 aa26.09■■□□□ 1.77
SDCBP2-201ENST00000339987 TNRQ92752 1358 aa26.09■■□□□ 1.77
SDCBP2-201ENST00000339987 CLTCL1P53675 1640 aa26.08■■□□□ 1.77
SDCBP2-201ENST00000339987 SLC52A1Q9NWF4 448 aa26.07■■□□□ 1.76
SDCBP2-201ENST00000339987 UGGT1Q9NYU2 1555 aa26.05■■□□□ 1.76
SDCBP2-201ENST00000339987 PLPPR3Q6T4P5 718 aa26.03■■□□□ 1.76
SDCBP2-201ENST00000339987 SIN3AQ96ST3 1273 aa26.02■■□□□ 1.76
SDCBP2-201ENST00000339987 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
SDCBP2-201ENST00000339987 IDI1Q13907 227 aa26■■□□□ 1.75
SDCBP2-201ENST00000339987 SETD1BQ9UPS6 1966 aaKnown RBP26■■□□□ 1.75
SDCBP2-201ENST00000339987 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
SDCBP2-201ENST00000339987 MYO3AQ8NEV4 1616 aa25.99■■□□□ 1.75
SDCBP2-201ENST00000339987 KIF1BO60333 1816 aa25.98■■□□□ 1.75
SDCBP2-201ENST00000339987 SPATA31E1Q6ZUB1 1445 aa25.96■■□□□ 1.75
SDCBP2-201ENST00000339987 ADGRB3O60242 1522 aa25.96■■□□□ 1.75
SDCBP2-201ENST00000339987 NEUROD1Q13562 356 aa25.96■■□□□ 1.75
SDCBP2-201ENST00000339987 KDM5AP29375 1690 aaKnown RBP25.95■■□□□ 1.74
SDCBP2-201ENST00000339987 ILDR1Q86SU0 546 aaPredicted RBP25.95■■□□□ 1.74
SDCBP2-201ENST00000339987 TMEM131LA2VDJ0 1609 aa25.94■■□□□ 1.74
SDCBP2-201ENST00000339987 A2ML1A8K2U0 1454 aa25.93■■□□□ 1.74
SDCBP2-201ENST00000339987 ZNF142P52746 1687 aaPredicted RBP25.92■■□□□ 1.74
SDCBP2-201ENST00000339987 CEP170BQ9Y4F5 1589 aaPredicted RBP25.91■■□□□ 1.74
SDCBP2-201ENST00000339987 UBR1Q8IWV7 1749 aa25.9■■□□□ 1.74
SDCBP2-201ENST00000339987 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
SDCBP2-201ENST00000339987 TIMELESSQ9UNS1 1208 aa25.88■■□□□ 1.73
SDCBP2-201ENST00000339987 CHGAP10645 457 aaKnown RBP25.88■■□□□ 1.73
SDCBP2-201ENST00000339987 TONSLQ96HA7 1378 aa25.87■■□□□ 1.73
SDCBP2-201ENST00000339987 STAG3Q9UJ98 1225 aa25.87■■□□□ 1.73
SDCBP2-201ENST00000339987 MYO5BQ9ULV0 1848 aa25.87■■□□□ 1.73
SDCBP2-201ENST00000339987 RGL3Q3MIN7 710 aa25.83■■□□□ 1.73
SDCBP2-201ENST00000339987 RPGRIP1LQ68CZ1 1315 aa25.83■■□□□ 1.73
SDCBP2-201ENST00000339987 L3MBTL2Q969R5 705 aa25.81■■□□□ 1.72
SDCBP2-201ENST00000339987 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
SDCBP2-201ENST00000339987 ZNF326Q5BKZ1 582 aaKnown RBP25.8■■□□□ 1.72
SDCBP2-201ENST00000339987 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
SDCBP2-201ENST00000339987 NEXMIFQ5QGS0 1516 aa25.79■■□□□ 1.72
SDCBP2-201ENST00000339987 PPLO60437 1756 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms