RNA–Protein interactions for RNA: ENST00000334975.13

KTN1-201, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-201ENST00000334975 HNRNPMP52272 730 aaKnown RBP eCLIP11.1□□□□□ -0.63
KTN1-201ENST00000334975 MYT1LQ9UL68 1186 aa11.1□□□□□ -0.63
KTN1-201ENST00000334975 POGZQ7Z3K3 1410 aa11.1□□□□□ -0.63
KTN1-201ENST00000334975 PPARGC1BQ86YN6 1023 aaKnown RBP11.1□□□□□ -0.63
KTN1-201ENST00000334975 ARHGEF12Q9NZN5 1544 aa11.09□□□□□ -0.63
KTN1-201ENST00000334975 SAMD9LQ8IVG5 1584 aa11.09□□□□□ -0.63
KTN1-201ENST00000334975 NPM2Q86SE8 214 aaKnown RBP11.09□□□□□ -0.63
KTN1-201ENST00000334975 ABCC1P33527 1531 aa11.09□□□□□ -0.63
KTN1-201ENST00000334975 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
KTN1-201ENST00000334975 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
KTN1-201ENST00000334975 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
KTN1-201ENST00000334975 TRAPPC8Q9Y2L5 1435 aa11.08□□□□□ -0.64
KTN1-201ENST00000334975 ZNF518AQ6AHZ1 1483 aa11.07□□□□□ -0.64
KTN1-201ENST00000334975 SYCP2Q9BX26 1530 aa11.07□□□□□ -0.64
KTN1-201ENST00000334975 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
KTN1-201ENST00000334975 YEATS2Q9ULM3 1422 aa11.07□□□□□ -0.64
KTN1-201ENST00000334975 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
KTN1-201ENST00000334975 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
KTN1-201ENST00000334975 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
KTN1-201ENST00000334975 ARID4BQ4LE39 1312 aaPredicted RBP11.05□□□□□ -0.64
KTN1-201ENST00000334975 MYOM3Q5VTT5 1437 aa11.04□□□□□ -0.64
KTN1-201ENST00000334975 PLEKHH2Q8IVE3 1493 aa11.04□□□□□ -0.64
KTN1-201ENST00000334975 ZFYVE16Q7Z3T8 1539 aa11.04□□□□□ -0.64
KTN1-201ENST00000334975 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
KTN1-201ENST00000334975 CAMSAP2Q08AD1 1489 aa11.04□□□□□ -0.64
KTN1-201ENST00000334975 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
KTN1-201ENST00000334975 KDM5CP41229 1560 aa11.03□□□□□ -0.64
KTN1-201ENST00000334975 MAGI2Q86UL8 1455 aa11.03□□□□□ -0.64
KTN1-201ENST00000334975 MYT1Q01538 1121 aa11.03□□□□□ -0.64
KTN1-201ENST00000334975 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
KTN1-201ENST00000334975 ARHGEF40Q8TER5 1519 aa11.03□□□□□ -0.64
KTN1-201ENST00000334975 SPAG9O60271 1321 aaKnown RBP11.02□□□□□ -0.64
KTN1-201ENST00000334975 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.64
KTN1-201ENST00000334975 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.64
KTN1-201ENST00000334975 HECW2Q9P2P5 1572 aa11.02□□□□□ -0.65
KTN1-201ENST00000334975 MBD5Q9P267 1494 aa11.02□□□□□ -0.65
KTN1-201ENST00000334975 MLH3Q9UHC1 1453 aa11.01□□□□□ -0.65
KTN1-201ENST00000334975 MIA2Q96PC5 1412 aa11.01□□□□□ -0.65
KTN1-201ENST00000334975 ATP10AO60312 1499 aa11□□□□□ -0.65
KTN1-201ENST00000334975 REM2Q8IYK8 340 aaPredicted RBP11□□□□□ -0.65
KTN1-201ENST00000334975 MLECQ14165 292 aa10.99□□□□□ -0.65
KTN1-201ENST00000334975 KIDINS220Q9ULH0 1771 aa10.99□□□□□ -0.65
KTN1-201ENST00000334975 FGD6Q6ZV73 1430 aa10.99□□□□□ -0.65
KTN1-201ENST00000334975 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
KTN1-201ENST00000334975 SIGLEC1Q9BZZ2 1709 aa10.99□□□□□ -0.65
KTN1-201ENST00000334975 ABCA6Q8N139 1617 aa10.98□□□□□ -0.65
KTN1-201ENST00000334975 DIP2CQ9Y2E4 1556 aa10.98□□□□□ -0.65
KTN1-201ENST00000334975 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
KTN1-201ENST00000334975 CCDC141Q6ZP82 1450 aa10.98□□□□□ -0.65
KTN1-201ENST00000334975 C9orf84Q5VXU9 1444 aa10.97□□□□□ -0.65
KTN1-201ENST00000334975 ATP7AQ04656 1500 aa10.97□□□□□ -0.65
KTN1-201ENST00000334975 PTPN23Q9H3S7 1636 aa10.97□□□□□ -0.65
KTN1-201ENST00000334975 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
KTN1-201ENST00000334975 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
KTN1-201ENST00000334975 NUBP1P53384 320 aa10.97□□□□□ -0.65
KTN1-201ENST00000334975 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
KTN1-201ENST00000334975 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
KTN1-201ENST00000334975 INO80Q9ULG1 1556 aaPredicted RBP10.96□□□□□ -0.66
KTN1-201ENST00000334975 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
KTN1-201ENST00000334975 ARHGEF5Q12774 1597 aa10.95□□□□□ -0.66
KTN1-201ENST00000334975 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
KTN1-201ENST00000334975 RNF25Q96BH1 459 aaPredicted RBP10.95□□□□□ -0.66
KTN1-201ENST00000334975 PAXIP1Q6ZW49 1069 aaPredicted RBP10.94□□□□□ -0.66
KTN1-201ENST00000334975 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
KTN1-201ENST00000334975 BCORL1Q5H9F3 1711 aa10.94□□□□□ -0.66
KTN1-201ENST00000334975 RTEL1-TNFRSF6BF6WH68 1400 aa10.93□□□□□ -0.66
KTN1-201ENST00000334975 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
KTN1-201ENST00000334975 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
KTN1-201ENST00000334975 CHIC2Q9UKJ5 165 aa10.93□□□□□ -0.66
KTN1-201ENST00000334975 ABCC5O15440 1437 aa10.92□□□□□ -0.66
KTN1-201ENST00000334975 A2MP01023 1474 aa10.92□□□□□ -0.66
KTN1-201ENST00000334975 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
KTN1-201ENST00000334975 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
KTN1-201ENST00000334975 DAPK1P53355 1430 aa10.91□□□□□ -0.66
KTN1-201ENST00000334975 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
KTN1-201ENST00000334975 MADDQ8WXG6 1647 aa10.91□□□□□ -0.66
KTN1-201ENST00000334975 HRCP23327 699 aa10.91□□□□□ -0.66
KTN1-201ENST00000334975 ITGAEP38570 1179 aa10.91□□□□□ -0.66
KTN1-201ENST00000334975 ADGBQ8N7X0 1667 aa10.9□□□□□ -0.66
KTN1-201ENST00000334975 DNMT1P26358 1616 aaKnown RBP10.9□□□□□ -0.66
KTN1-201ENST00000334975 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.66
KTN1-201ENST00000334975 GGT6Q6P531 493 aa10.9□□□□□ -0.66
KTN1-201ENST00000334975 RRP7BPQ9NSQ0 103 aa10.9□□□□□ -0.66
KTN1-201ENST00000334975 AGLP35573 1532 aa10.89□□□□□ -0.67
KTN1-201ENST00000334975 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
KTN1-201ENST00000334975 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
KTN1-201ENST00000334975 RIMS1Q86UR5 1692 aaKnown RBP10.89□□□□□ -0.67
KTN1-201ENST00000334975 KIF3BO15066 747 aa10.89□□□□□ -0.67
KTN1-201ENST00000334975 GSE1Q14687 1217 aa10.89□□□□□ -0.67
KTN1-201ENST00000334975 ESF1Q9H501 851 aaKnown RBP10.89□□□□□ -0.67
KTN1-201ENST00000334975 PLXNC1O60486 1568 aa10.88□□□□□ -0.67
KTN1-201ENST00000334975 MAST1Q9Y2H9 1570 aa10.88□□□□□ -0.67
KTN1-201ENST00000334975 CROCC2H7BZ55 1655 aa10.88□□□□□ -0.67
KTN1-201ENST00000334975 PTPRMP28827 1452 aa10.88□□□□□ -0.67
KTN1-201ENST00000334975 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
KTN1-201ENST00000334975 FER1L4A9Z1Z3 1794 aa10.87□□□□□ -0.67
KTN1-201ENST00000334975 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
KTN1-201ENST00000334975 KIF15Q9NS87 1388 aa10.86□□□□□ -0.67
KTN1-201ENST00000334975 CEBPAP49715 358 aaPredicted RBP10.86□□□□□ -0.67
KTN1-201ENST00000334975 ANKRD30AQ9BXX3 1397 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms