RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 UNC13BO14795 1591 aa22.68■■□□□ 1.22
CMC1-201ENST00000334841 PRDM15P57071 1507 aaPredicted RBP22.66■■□□□ 1.22
CMC1-201ENST00000334841 KIF3BO15066 747 aa22.63■■□□□ 1.21
CMC1-201ENST00000334841 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
CMC1-201ENST00000334841 VWDEQ8N2E2 1590 aa22.59■■□□□ 1.21
CMC1-201ENST00000334841 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
CMC1-201ENST00000334841 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
CMC1-201ENST00000334841 HRCP23327 699 aa22.54■■□□□ 1.2
CMC1-201ENST00000334841 ZC3H13Q5T200 1668 aaKnown RBP22.54■■□□□ 1.2
CMC1-201ENST00000334841 CEP152O94986 1710 aa22.54■■□□□ 1.2
CMC1-201ENST00000334841 PZPP20742 1482 aa22.54■■□□□ 1.2
CMC1-201ENST00000334841 ABCC3O15438 1527 aa22.53■■□□□ 1.2
CMC1-201ENST00000334841 FAM135AQ9P2D6 1515 aa22.53■■□□□ 1.2
CMC1-201ENST00000334841 GGT6Q6P531 493 aa22.53■■□□□ 1.2
CMC1-201ENST00000334841 NUP155O75694 1391 aa22.52■■□□□ 1.2
CMC1-201ENST00000334841 MLECQ14165 292 aa22.52■■□□□ 1.2
CMC1-201ENST00000334841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.52■■□□□ 1.21e-6■■■□□ 18.6
CMC1-201ENST00000334841 LMTK2Q8IWU2 1503 aa22.51■■□□□ 1.19
CMC1-201ENST00000334841 KANK1Q14678 1352 aa22.5■■□□□ 1.19
CMC1-201ENST00000334841 ADAMTSL3P82987 1691 aa22.49■■□□□ 1.19
CMC1-201ENST00000334841 CLTCQ00610 1675 aaKnown RBP22.49■■□□□ 1.19
CMC1-201ENST00000334841 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
CMC1-201ENST00000334841 TET3O43151 1660 aa22.49■■□□□ 1.19
CMC1-201ENST00000334841 FER1L4A9Z1Z3 1794 aa22.48■■□□□ 1.19
CMC1-201ENST00000334841 CAMSAP1Q5T5Y3 1602 aa22.48■■□□□ 1.19
CMC1-201ENST00000334841 MADDQ8WXG6 1647 aa22.48■■□□□ 1.19
CMC1-201ENST00000334841 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
CMC1-201ENST00000334841 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
CMC1-201ENST00000334841 MROH2AA6NES4 1674 aa22.43■■□□□ 1.18
CMC1-201ENST00000334841 WASHC2CQ9Y4E1 1318 aa22.43■■□□□ 1.18
CMC1-201ENST00000334841 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
CMC1-201ENST00000334841 E9PCH4 1651 aa22.42■■□□□ 1.18
CMC1-201ENST00000334841 RIMS1Q86UR5 1692 aaKnown RBP22.42■■□□□ 1.18
CMC1-201ENST00000334841 CNTLNQ9NXG0 1405 aa22.41■■□□□ 1.18
CMC1-201ENST00000334841 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
CMC1-201ENST00000334841 MPHOSPH9Q99550 1183 aa22.39■■□□□ 1.17
CMC1-201ENST00000334841 SLC4A1APQ9BWU0 796 aaKnown RBP22.39■■□□□ 1.17
CMC1-201ENST00000334841 NPATQ14207 1427 aa22.39■■□□□ 1.17
CMC1-201ENST00000334841 ARHGAP31Q2M1Z3 1444 aa22.37■■□□□ 1.17
CMC1-201ENST00000334841 C3P01024 1663 aa22.36■■□□□ 1.17
CMC1-201ENST00000334841 RPRD2Q5VT52 1461 aaKnown RBP22.35■■□□□ 1.17
CMC1-201ENST00000334841 ESF1Q9H501 851 aaKnown RBP22.35■■□□□ 1.17
CMC1-201ENST00000334841 PKD2Q13563 968 aa22.34■■□□□ 1.17
CMC1-201ENST00000334841 ZMYM3Q14202 1370 aa22.33■■□□□ 1.17
CMC1-201ENST00000334841 PREX1Q8TCU6 1659 aa22.32■■□□□ 1.16
CMC1-201ENST00000334841 FOXD1Q16676 465 aa22.31■■□□□ 1.16
CMC1-201ENST00000334841 SPHKAPQ2M3C7 1700 aa22.31■■□□□ 1.16
CMC1-201ENST00000334841 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
CMC1-201ENST00000334841 ERVK-7P63135 1459 aa22.29■■□□□ 1.16
CMC1-201ENST00000334841 PTPRMP28827 1452 aa22.28■■□□□ 1.16
CMC1-201ENST00000334841 SYNMO15061 1565 aa22.28■■□□□ 1.16
CMC1-201ENST00000334841 PLA2R1Q13018 1463 aa22.28■■□□□ 1.16
CMC1-201ENST00000334841 TRPM2O94759 1503 aa22.27■■□□□ 1.16
CMC1-201ENST00000334841 KDM4FA0A1W2PPD8 638 aa22.27■■□□□ 1.16
CMC1-201ENST00000334841 PTPRTO14522 1441 aa22.27■■□□□ 1.16
CMC1-201ENST00000334841 NOS1P29475 1434 aa22.27■■□□□ 1.16
CMC1-201ENST00000334841 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
CMC1-201ENST00000334841 FBXO31Q5XUX0 539 aaPredicted RBP22.24■■□□□ 1.15
CMC1-201ENST00000334841 ANKRD30BQ9BXX2 1392 aa22.24■■□□□ 1.15
CMC1-201ENST00000334841 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
CMC1-201ENST00000334841 CLTCL1P53675 1640 aa22.22■■□□□ 1.15
CMC1-201ENST00000334841 PIK3C2BO00750 1634 aa22.21■■□□□ 1.15
CMC1-201ENST00000334841 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
CMC1-201ENST00000334841 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
CMC1-201ENST00000334841 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
CMC1-201ENST00000334841 MYO3AQ8NEV4 1616 aa22.17■■□□□ 1.14
CMC1-201ENST00000334841 TNRQ92752 1358 aa22.17■■□□□ 1.14
CMC1-201ENST00000334841 CCDC144AA2RUR9 1427 aa22.15■■□□□ 1.14
CMC1-201ENST00000334841 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
CMC1-201ENST00000334841 NLRP1Q9C000 1473 aa22.11■■□□□ 1.13
CMC1-201ENST00000334841 ZNF142P52746 1687 aaPredicted RBP22.1■■□□□ 1.13
CMC1-201ENST00000334841 ADGRB3O60242 1522 aa22.1■■□□□ 1.13
CMC1-201ENST00000334841 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
CMC1-201ENST00000334841 CEP170BQ9Y4F5 1589 aaPredicted RBP22.08■■□□□ 1.13
CMC1-201ENST00000334841 TMEM131LA2VDJ0 1609 aa22.08■■□□□ 1.13
CMC1-201ENST00000334841 IDI1Q13907 227 aa22.07■■□□□ 1.12
CMC1-201ENST00000334841 SLC52A1Q9NWF4 448 aa22.07■■□□□ 1.12
CMC1-201ENST00000334841 KIF1BO60333 1816 aa22.06■■□□□ 1.12
CMC1-201ENST00000334841 NEURL4Q96JN8 1562 aa22.06■■□□□ 1.12
CMC1-201ENST00000334841 KDM5AP29375 1690 aaKnown RBP22.06■■□□□ 1.12
CMC1-201ENST00000334841 UBR1Q8IWV7 1749 aa22.06■■□□□ 1.12
CMC1-201ENST00000334841 SPATA31E1Q6ZUB1 1445 aa22.06■■□□□ 1.12
CMC1-201ENST00000334841 A2ML1A8K2U0 1454 aa22.05■■□□□ 1.12
CMC1-201ENST00000334841 MYO5BQ9ULV0 1848 aa22.03■■□□□ 1.12
CMC1-201ENST00000334841 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
CMC1-201ENST00000334841 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
CMC1-201ENST00000334841 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
CMC1-201ENST00000334841 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
CMC1-201ENST00000334841 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
CMC1-201ENST00000334841 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
CMC1-201ENST00000334841 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
CMC1-201ENST00000334841 PPLO60437 1756 aa21.93■■□□□ 1.1
CMC1-201ENST00000334841 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
CMC1-201ENST00000334841 STAG3Q9UJ98 1225 aa21.93■■□□□ 1.1
CMC1-201ENST00000334841 SLIT1O75093 1534 aa21.92■■□□□ 1.1
CMC1-201ENST00000334841 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
CMC1-201ENST00000334841 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
CMC1-201ENST00000334841 RGL3Q3MIN7 710 aa21.92■■□□□ 1.1
CMC1-201ENST00000334841 TMEM2Q9UHN6 1383 aa21.9■■□□□ 1.1
CMC1-201ENST00000334841 RIMS2Q9UQ26 1411 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms