RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 KIAA2012Q0VF49 1180 aa20.73■□□□□ 0.91
NSMCE3-201ENST00000332303 TAF7LQ5H9L4 462 aa20.72■□□□□ 0.91
NSMCE3-201ENST00000332303 GZF1Q9H116 711 aaPredicted RBP20.71■□□□□ 0.91
NSMCE3-201ENST00000332303 PANK3Q9H999 370 aa20.71■□□□□ 0.91
NSMCE3-201ENST00000332303 CHMP3Q9Y3E7 222 aa20.71■□□□□ 0.91
NSMCE3-201ENST00000332303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.7■□□□□ 0.9
NSMCE3-201ENST00000332303 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
NSMCE3-201ENST00000332303 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.9
NSMCE3-201ENST00000332303 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
NSMCE3-201ENST00000332303 CCDC34Q96HJ3 373 aa20.69■□□□□ 0.9
NSMCE3-201ENST00000332303 PRKRIP1Q9H875 184 aaPredicted RBP20.67■□□□□ 0.9
NSMCE3-201ENST00000332303 UACAQ9BZF9 1416 aa20.67■□□□□ 0.9
NSMCE3-201ENST00000332303 TSHZ2Q9NRE2 1034 aa20.66■□□□□ 0.9
NSMCE3-201ENST00000332303 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
NSMCE3-201ENST00000332303 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
NSMCE3-201ENST00000332303 WIZO95785 1651 aa20.65■□□□□ 0.9
NSMCE3-201ENST00000332303 CLSTN1O94985 981 aa20.65■□□□□ 0.9
NSMCE3-201ENST00000332303 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.9
NSMCE3-201ENST00000332303 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.9
NSMCE3-201ENST00000332303 CGNL1Q0VF96 1302 aa20.64■□□□□ 0.9
NSMCE3-201ENST00000332303 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
NSMCE3-201ENST00000332303 PTPRGP23470 1445 aa20.63■□□□□ 0.89
NSMCE3-201ENST00000332303 ST18O60284 1047 aa20.62■□□□□ 0.89
NSMCE3-201ENST00000332303 CSPP1Q1MSJ5 1256 aa20.62■□□□□ 0.89
NSMCE3-201ENST00000332303 EVC2Q86UK5 1308 aa20.62■□□□□ 0.89
NSMCE3-201ENST00000332303 E9PSI1 815 aa20.62■□□□□ 0.89
NSMCE3-201ENST00000332303 CCDC9Q9Y3X0 531 aaKnown RBP20.62■□□□□ 0.89
NSMCE3-201ENST00000332303 GOLGA6L3A6NEY3 463 aa20.61■□□□□ 0.89
NSMCE3-201ENST00000332303 CENPQQ7L2Z9 268 aaPredicted RBP20.61■□□□□ 0.89
NSMCE3-201ENST00000332303 COG3Q96JB2 828 aa20.61■□□□□ 0.89
NSMCE3-201ENST00000332303 KIF3AQ9Y496 699 aa20.61■□□□□ 0.89
NSMCE3-201ENST00000332303 HSP90B1P14625 803 aaKnown RBP20.6■□□□□ 0.89
NSMCE3-201ENST00000332303 TPM4P67936 248 aa20.6■□□□□ 0.89
NSMCE3-201ENST00000332303 USP47Q96K76 1375 aa20.59■□□□□ 0.89
NSMCE3-201ENST00000332303 ZKSCAN2Q63HK3 967 aa20.59■□□□□ 0.89
NSMCE3-201ENST00000332303 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
NSMCE3-201ENST00000332303 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
NSMCE3-201ENST00000332303 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
NSMCE3-201ENST00000332303 BCL2L13Q9BXK5 485 aa20.56■□□□□ 0.88
NSMCE3-201ENST00000332303 KIF16BQ96L93 1317 aa20.56■□□□□ 0.88
NSMCE3-201ENST00000332303 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
NSMCE3-201ENST00000332303 NOL8Q76FK4 1167 aaKnown RBP20.55■□□□□ 0.88
NSMCE3-201ENST00000332303 APAF1O14727 1248 aa20.53■□□□□ 0.88
NSMCE3-201ENST00000332303 TEFQ10587 303 aa20.53■□□□□ 0.88
NSMCE3-201ENST00000332303 FAM161AQ3B820 660 aa20.53■□□□□ 0.88
NSMCE3-201ENST00000332303 FANCD2Q9BXW9 1451 aa20.53■□□□□ 0.88
NSMCE3-201ENST00000332303 RRP1P56182 461 aaKnown RBP20.53■□□□□ 0.88
NSMCE3-201ENST00000332303 ANKRD45Q5TZF3 282 aa20.52■□□□□ 0.88
NSMCE3-201ENST00000332303 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.87
NSMCE3-201ENST00000332303 TOMM22Q9NS69 142 aa20.51■□□□□ 0.87
NSMCE3-201ENST00000332303 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
NSMCE3-201ENST00000332303 FRAT2O75474 233 aaPredicted RBP20.51■□□□□ 0.87
NSMCE3-201ENST00000332303 PHF14O94880 888 aa20.51■□□□□ 0.87
NSMCE3-201ENST00000332303 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
NSMCE3-201ENST00000332303 PDE4AP27815 886 aa20.51■□□□□ 0.87
NSMCE3-201ENST00000332303 C1orf141Q5JVX7 400 aa20.5■□□□□ 0.87
NSMCE3-201ENST00000332303 STAC3Q96MF2 364 aa20.5■□□□□ 0.87
NSMCE3-201ENST00000332303 RASSF8Q8NHQ8 419 aa20.5■□□□□ 0.87
NSMCE3-201ENST00000332303 CHMP4CQ96CF2 233 aa20.5■□□□□ 0.87
NSMCE3-201ENST00000332303 PLIN1O60240 522 aa20.5■□□□□ 0.87
NSMCE3-201ENST00000332303 COG6Q9Y2V7 657 aa20.49■□□□□ 0.87
NSMCE3-201ENST00000332303 EXOC6Q8TAG9 804 aa20.49■□□□□ 0.87
NSMCE3-201ENST00000332303 SF3A1Q15459 793 aaKnown RBP20.49■□□□□ 0.87
NSMCE3-201ENST00000332303 MYOM3Q5VTT5 1437 aa20.48■□□□□ 0.87
NSMCE3-201ENST00000332303 USP35Q9P2H5 1018 aa20.48■□□□□ 0.87
NSMCE3-201ENST00000332303 DDX11L8A8MPP1 907 aa20.48■□□□□ 0.87
NSMCE3-201ENST00000332303 RILPL2Q969X0 211 aa20.47■□□□□ 0.87
NSMCE3-201ENST00000332303 DIAPH1O60610 1272 aaKnown RBP20.47■□□□□ 0.87
NSMCE3-201ENST00000332303 G3V3G9 751 aa20.46■□□□□ 0.87
NSMCE3-201ENST00000332303 DCAF8Q5TAQ9 597 aa20.46■□□□□ 0.87
NSMCE3-201ENST00000332303 DDX19BQ9UMR2 479 aa20.46■□□□□ 0.87
NSMCE3-201ENST00000332303 NEXNQ0ZGT2 675 aa20.46■□□□□ 0.87
NSMCE3-201ENST00000332303 CRBNQ96SW2 442 aa20.46■□□□□ 0.87
NSMCE3-201ENST00000332303 ATP6V1DQ9Y5K8 247 aa20.46■□□□□ 0.87
NSMCE3-201ENST00000332303 API5Q9BZZ5 524 aaKnown RBP20.45■□□□□ 0.86
NSMCE3-201ENST00000332303 IGF1RP08069 1367 aa20.44■□□□□ 0.86
NSMCE3-201ENST00000332303 LRRFIP1Q32MZ4 808 aaKnown RBP20.42■□□□□ 0.86
NSMCE3-201ENST00000332303 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
NSMCE3-201ENST00000332303 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
NSMCE3-201ENST00000332303 REC8O95072 547 aa20.41■□□□□ 0.86
NSMCE3-201ENST00000332303 DIAPH3Q9NSV4 1193 aa20.41■□□□□ 0.86
NSMCE3-201ENST00000332303 DDX49Q9Y6V7 483 aaKnown RBP20.41■□□□□ 0.86
NSMCE3-201ENST00000332303 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
NSMCE3-201ENST00000332303 RUFY2Q8WXA3 655 aa20.41■□□□□ 0.86
NSMCE3-201ENST00000332303 C9orf78Q9NZ63 289 aaPredicted RBP20.41■□□□□ 0.86
NSMCE3-201ENST00000332303 H3BQV1 296 aa20.4■□□□□ 0.86
NSMCE3-201ENST00000332303 IFFO2Q5TF58 517 aa20.4■□□□□ 0.86
NSMCE3-201ENST00000332303 DZIP1LQ8IYY4 767 aaKnown RBP20.4■□□□□ 0.86
NSMCE3-201ENST00000332303 FAM184AQ8NB25 1140 aa20.4■□□□□ 0.86
NSMCE3-201ENST00000332303 RIPK4P57078 832 aa20.4■□□□□ 0.86
NSMCE3-201ENST00000332303 FOXD4L5Q5VV16 416 aaPredicted RBP20.4■□□□□ 0.86
NSMCE3-201ENST00000332303 FOXD4L4Q8WXT5 416 aaPredicted RBP20.4■□□□□ 0.86
NSMCE3-201ENST00000332303 NOC3LQ8WTT2 800 aaKnown RBP20.39■□□□□ 0.86
NSMCE3-201ENST00000332303 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.85
NSMCE3-201ENST00000332303 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.85
NSMCE3-201ENST00000332303 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
NSMCE3-201ENST00000332303 SKOR2Q2VWA4 1001 aaPredicted RBP20.38■□□□□ 0.85
NSMCE3-201ENST00000332303 GAPVD1Q14C86 1478 aa20.38■□□□□ 0.85
NSMCE3-201ENST00000332303 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
NSMCE3-201ENST00000332303 ZKSCAN1P17029 563 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms