RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 PDE4AP27815 886 aa11.49□□□□□ -0.57
LIMK2-201ENST00000331728 PPM1GO15355 546 aaPredicted RBP11.48□□□□□ -0.57
LIMK2-201ENST00000331728 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
LIMK2-201ENST00000331728 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
LIMK2-201ENST00000331728 KIAA0556O60303 1618 aa11.48□□□□□ -0.57
LIMK2-201ENST00000331728 KIF14Q15058 1648 aa11.48□□□□□ -0.57
LIMK2-201ENST00000331728 CCDC144AA2RUR9 1427 aa11.48□□□□□ -0.57
LIMK2-201ENST00000331728 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
LIMK2-201ENST00000331728 MBD5Q9P267 1494 aa11.47□□□□□ -0.57
LIMK2-201ENST00000331728 TMF1P82094 1093 aa11.47□□□□□ -0.57
LIMK2-201ENST00000331728 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
LIMK2-201ENST00000331728 MS4A1P11836 297 aa11.47□□□□□ -0.57
LIMK2-201ENST00000331728 PRKCSHP14314 528 aaPredicted RBP11.47□□□□□ -0.57
LIMK2-201ENST00000331728 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
LIMK2-201ENST00000331728 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.46□□□□□ -0.57
LIMK2-201ENST00000331728 RALGAPBQ86X10 1494 aa11.46□□□□□ -0.57
LIMK2-201ENST00000331728 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.58
LIMK2-201ENST00000331728 GRIN2AQ12879 1464 aa11.46□□□□□ -0.58
LIMK2-201ENST00000331728 KDM5CP41229 1560 aa11.46□□□□□ -0.58
LIMK2-201ENST00000331728 PLIN1O60240 522 aa11.46□□□□□ -0.58
LIMK2-201ENST00000331728 KNSTRNQ9Y448 316 aa11.46□□□□□ -0.58
LIMK2-201ENST00000331728 IL27Q8NEV9 243 aa11.45□□□□□ -0.58
LIMK2-201ENST00000331728 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
LIMK2-201ENST00000331728 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
LIMK2-201ENST00000331728 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
LIMK2-201ENST00000331728 ITSN2Q9NZM3 1697 aa11.44□□□□□ -0.58
LIMK2-201ENST00000331728 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
LIMK2-201ENST00000331728 PANK3Q9H999 370 aa11.44□□□□□ -0.58
LIMK2-201ENST00000331728 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
LIMK2-201ENST00000331728 CRBNQ96SW2 442 aa11.43□□□□□ -0.58
LIMK2-201ENST00000331728 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
LIMK2-201ENST00000331728 NBPF1Q3BBV0 1214 aa11.42□□□□□ -0.58
LIMK2-201ENST00000331728 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
LIMK2-201ENST00000331728 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
LIMK2-201ENST00000331728 UHRF1BP1Q6BDS2 1440 aa11.4□□□□□ -0.58
LIMK2-201ENST00000331728 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.58
LIMK2-201ENST00000331728 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
LIMK2-201ENST00000331728 ARHGEF12Q9NZN5 1544 aa11.39□□□□□ -0.59
LIMK2-201ENST00000331728 RGS3P49796 1198 aa11.39□□□□□ -0.59
LIMK2-201ENST00000331728 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
LIMK2-201ENST00000331728 WASHC2CQ9Y4E1 1318 aa11.37□□□□□ -0.59
LIMK2-201ENST00000331728 PTPRGP23470 1445 aa11.36□□□□□ -0.59
LIMK2-201ENST00000331728 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
LIMK2-201ENST00000331728 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
LIMK2-201ENST00000331728 PARD3Q8TEW0 1356 aa11.35□□□□□ -0.59
LIMK2-201ENST00000331728 SHANK2Q9UPX8 1470 aa11.35□□□□□ -0.59
LIMK2-201ENST00000331728 CCDC141Q6ZP82 1450 aa11.35□□□□□ -0.59
LIMK2-201ENST00000331728 GSE1Q14687 1217 aa11.34□□□□□ -0.59
LIMK2-201ENST00000331728 ERBINQ96RT1 1412 aa11.34□□□□□ -0.59
LIMK2-201ENST00000331728 CENPQQ7L2Z9 268 aaPredicted RBP11.34□□□□□ -0.59
LIMK2-201ENST00000331728 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
LIMK2-201ENST00000331728 E9PCH4 1651 aa11.33□□□□□ -0.6
LIMK2-201ENST00000331728 SKAP1Q86WV1 359 aa11.33□□□□□ -0.6
LIMK2-201ENST00000331728 PRAG1Q86YV5 1406 aa11.33□□□□□ -0.6
LIMK2-201ENST00000331728 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
LIMK2-201ENST00000331728 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
LIMK2-201ENST00000331728 NFKBIBQ15653 356 aa11.32□□□□□ -0.6
LIMK2-201ENST00000331728 CCDC146Q8IYE0 955 aa11.32□□□□□ -0.6
LIMK2-201ENST00000331728 DISP3Q9P2K9 1392 aa11.32□□□□□ -0.6
LIMK2-201ENST00000331728 ATP10BO94823 1461 aa11.32□□□□□ -0.6
LIMK2-201ENST00000331728 EIF4G3O43432 1585 aaKnown RBP11.31□□□□□ -0.6
LIMK2-201ENST00000331728 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-201ENST00000331728 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
LIMK2-201ENST00000331728 ARHGAP5Q13017 1502 aa11.3□□□□□ -0.6
LIMK2-201ENST00000331728 BRPF3Q9ULD4 1205 aa11.3□□□□□ -0.6
LIMK2-201ENST00000331728 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
LIMK2-201ENST00000331728 PER1O15534 1290 aaPredicted RBP11.3□□□□□ -0.6
LIMK2-201ENST00000331728 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
LIMK2-201ENST00000331728 PLEKHH2Q8IVE3 1493 aa11.29□□□□□ -0.6
LIMK2-201ENST00000331728 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
LIMK2-201ENST00000331728 C20orf194Q5TEA3 1177 aa11.29□□□□□ -0.6
LIMK2-201ENST00000331728 INSRP06213 1382 aa11.29□□□□□ -0.6
LIMK2-201ENST00000331728 EFCAB2Q5VUJ9 269 aa11.29□□□□□ -0.6
LIMK2-201ENST00000331728 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
LIMK2-201ENST00000331728 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
LIMK2-201ENST00000331728 TESK2Q96S53 571 aa11.28□□□□□ -0.6
LIMK2-201ENST00000331728 CEP170Q5SW79 1584 aa11.27□□□□□ -0.6
LIMK2-201ENST00000331728 COL17A1Q9UMD9 1497 aaPredicted RBP11.27□□□□□ -0.6
LIMK2-201ENST00000331728 NEUROD2Q15784 382 aa11.27□□□□□ -0.6
LIMK2-201ENST00000331728 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.6
LIMK2-201ENST00000331728 APAF1O14727 1248 aa11.27□□□□□ -0.61
LIMK2-201ENST00000331728 EIF3AQ14152 1382 aaKnown RBP11.27□□□□□ -0.61
LIMK2-201ENST00000331728 ZMYM4Q5VZL5 1548 aa11.27□□□□□ -0.61
LIMK2-201ENST00000331728 ABCC10Q5T3U5 1492 aa11.26□□□□□ -0.61
LIMK2-201ENST00000331728 BECN1Q14457 450 aa11.26□□□□□ -0.61
LIMK2-201ENST00000331728 KDM5DQ9BY66 1539 aa11.26□□□□□ -0.61
LIMK2-201ENST00000331728 ADCY10Q96PN6 1610 aa11.26□□□□□ -0.61
LIMK2-201ENST00000331728 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
LIMK2-201ENST00000331728 A2MP01023 1474 aa11.25□□□□□ -0.61
LIMK2-201ENST00000331728 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-201ENST00000331728 SPAG9O60271 1321 aaKnown RBP11.24□□□□□ -0.61
LIMK2-201ENST00000331728 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
LIMK2-201ENST00000331728 KANK1Q14678 1352 aa11.24□□□□□ -0.61
LIMK2-201ENST00000331728 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
LIMK2-201ENST00000331728 NUP160Q12769 1436 aa11.24□□□□□ -0.61
LIMK2-201ENST00000331728 E9PSI1 815 aa11.23□□□□□ -0.61
LIMK2-201ENST00000331728 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
LIMK2-201ENST00000331728 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
LIMK2-201ENST00000331728 CENPJQ9HC77 1338 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-201ENST00000331728 SYCP2Q9BX26 1530 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms