RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 GCC2Q8IWJ2 1684 aa39.11■■■■□ 3.85
SMDT1-201ENST00000331479 MROH1Q8NDA8 1641 aa39.1■■■■□ 3.85
SMDT1-201ENST00000331479 RIMS1Q86UR5 1692 aaKnown RBP39.07■■■■□ 3.85
SMDT1-201ENST00000331479 DEPDC5O75140 1603 aa39.06■■■■□ 3.84
SMDT1-201ENST00000331479 PPP6R1Q9UPN7 881 aa39.04■■■■□ 3.84
SMDT1-201ENST00000331479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.03■■■■□ 3.84
SMDT1-201ENST00000331479 ESF1Q9H501 851 aaKnown RBP39.02■■■■□ 3.84
SMDT1-201ENST00000331479 PRDM15P57071 1507 aaPredicted RBP39.02■■■■□ 3.84
SMDT1-201ENST00000331479 CLTCQ00610 1675 aaKnown RBP39.01■■■■□ 3.83
SMDT1-201ENST00000331479 TRIM26Q12899 539 aaPredicted RBP38.99■■■■□ 3.83
SMDT1-201ENST00000331479 PTPRMP28827 1452 aa38.98■■■■□ 3.83
SMDT1-201ENST00000331479 WASHC2CQ9Y4E1 1318 aa38.98■■■■□ 3.83
SMDT1-201ENST00000331479 KDM5DQ9BY66 1539 aa38.97■■■■□ 3.83
SMDT1-201ENST00000331479 CNTLNQ9NXG0 1405 aa38.96■■■■□ 3.83
SMDT1-201ENST00000331479 UNC13BO14795 1591 aa38.95■■■■□ 3.83
SMDT1-201ENST00000331479 ABCC3O15438 1527 aa38.94■■■■□ 3.82
SMDT1-201ENST00000331479 FAM135AQ9P2D6 1515 aa38.93■■■■□ 3.82
SMDT1-201ENST00000331479 VWDEQ8N2E2 1590 aa38.91■■■■□ 3.82
SMDT1-201ENST00000331479 CEP152O94986 1710 aa38.91■■■■□ 3.82
SMDT1-201ENST00000331479 CEBPAP49715 358 aaPredicted RBP38.91■■■■□ 3.82
SMDT1-201ENST00000331479 PLPPR3Q6T4P5 718 aa38.91■■■■□ 3.82
SMDT1-201ENST00000331479 SETD5Q9C0A6 1442 aa38.9■■■■□ 3.82
SMDT1-201ENST00000331479 MROH2AA6NES4 1674 aa38.9■■■■□ 3.82
SMDT1-201ENST00000331479 ZMYM3Q14202 1370 aa38.9■■■■□ 3.82
SMDT1-201ENST00000331479 KANK1Q14678 1352 aa38.9■■■■□ 3.82
SMDT1-201ENST00000331479 ZC3H13Q5T200 1668 aaKnown RBP38.89■■■■□ 3.82
SMDT1-201ENST00000331479 C3P01024 1663 aa38.87■■■■□ 3.81
SMDT1-201ENST00000331479 NUP155O75694 1391 aa38.84■■■■□ 3.81
SMDT1-201ENST00000331479 RAB3GAP2Q9H2M9 1393 aa38.82■■■■□ 3.8
SMDT1-201ENST00000331479 LMTK2Q8IWU2 1503 aa38.81■■■■□ 3.8
SMDT1-201ENST00000331479 CAMSAP1Q5T5Y3 1602 aa38.8■■■■□ 3.8
SMDT1-201ENST00000331479 IQGAP3Q86VI3 1631 aa38.8■■■■□ 3.8
SMDT1-201ENST00000331479 TRIM52Q96A61 297 aa38.77■■■■□ 3.8
SMDT1-201ENST00000331479 PZPP20742 1482 aa38.73■■■■□ 3.79
SMDT1-201ENST00000331479 FBXO31Q5XUX0 539 aaPredicted RBP38.71■■■■□ 3.79
SMDT1-201ENST00000331479 EFCAB6Q5THR3 1501 aa38.71■■■■□ 3.79
SMDT1-201ENST00000331479 TET3O43151 1660 aa38.7■■■■□ 3.79
SMDT1-201ENST00000331479 AEBP2Q6ZN18 517 aaPredicted RBP38.7■■■■□ 3.79
SMDT1-201ENST00000331479 NPATQ14207 1427 aa38.7■■■■□ 3.79
SMDT1-201ENST00000331479 ARHGAP31Q2M1Z3 1444 aa38.69■■■■□ 3.78
SMDT1-201ENST00000331479 CFAP65Q6ZU64 1925 aaKnown RBP38.64■■■■□ 3.78
SMDT1-201ENST00000331479 HRCP23327 699 aa38.61■■■■□ 3.77
SMDT1-201ENST00000331479 E9PCH4 1651 aa38.61■■■■□ 3.77
SMDT1-201ENST00000331479 ERVK-7P63135 1459 aa38.59■■■■□ 3.77
SMDT1-201ENST00000331479 PREX1Q8TCU6 1659 aa38.59■■■■□ 3.77
SMDT1-201ENST00000331479 SLC4A1APQ9BWU0 796 aaKnown RBP38.58■■■■□ 3.77
SMDT1-201ENST00000331479 PCGF6Q9BYE7 350 aa38.58■■■■□ 3.77
SMDT1-201ENST00000331479 ACIN1Q9UKV3 1341 aaKnown RBP38.57■■■■□ 3.77
SMDT1-201ENST00000331479 SPATA31D1Q6ZQQ2 1576 aa38.57■■■■□ 3.77
SMDT1-201ENST00000331479 RPRD2Q5VT52 1461 aaKnown RBP38.56■■■■□ 3.76
SMDT1-201ENST00000331479 SETD1BQ9UPS6 1966 aaKnown RBP38.54■■■■□ 3.76
SMDT1-201ENST00000331479 TNRQ92752 1358 aa38.54■■■■□ 3.76
SMDT1-201ENST00000331479 MPHOSPH9Q99550 1183 aa38.53■■■■□ 3.76
SMDT1-201ENST00000331479 PKD2Q13563 968 aa38.52■■■■□ 3.76
SMDT1-201ENST00000331479 NOS1P29475 1434 aa38.5■■■■□ 3.75
SMDT1-201ENST00000331479 MYO3AQ8NEV4 1616 aa38.47■■■■□ 3.75
SMDT1-201ENST00000331479 SYNMO15061 1565 aa38.45■■■■□ 3.75
SMDT1-201ENST00000331479 FOXD1Q16676 465 aa38.44■■■■□ 3.74
SMDT1-201ENST00000331479 UHRF1BP1Q6BDS2 1440 aa38.44■■■■□ 3.74
SMDT1-201ENST00000331479 LMTK3Q96Q04 1460 aa38.42■■■■□ 3.74
SMDT1-201ENST00000331479 SPHKAPQ2M3C7 1700 aa38.38■■■■□ 3.73
SMDT1-201ENST00000331479 NLRP1Q9C000 1473 aa38.37■■■■□ 3.73
SMDT1-201ENST00000331479 PTPRTO14522 1441 aa38.37■■■■□ 3.73
SMDT1-201ENST00000331479 CEP170BQ9Y4F5 1589 aaPredicted RBP38.36■■■■□ 3.73
SMDT1-201ENST00000331479 PLA2R1Q13018 1463 aa38.35■■■■□ 3.73
SMDT1-201ENST00000331479 UGGT1Q9NYU2 1555 aa38.34■■■■□ 3.73
SMDT1-201ENST00000331479 ZNF142P52746 1687 aaPredicted RBP38.34■■■■□ 3.73
SMDT1-201ENST00000331479 IDI1Q13907 227 aa38.34■■■■□ 3.73
SMDT1-201ENST00000331479 A2ML1A8K2U0 1454 aa38.33■■■■□ 3.73
SMDT1-201ENST00000331479 SLC52A1Q9NWF4 448 aa38.3■■■■□ 3.72
SMDT1-201ENST00000331479 HSPA2P54652 639 aa38.29■■■■□ 3.72
SMDT1-201ENST00000331479 PIK3C2BO00750 1634 aa38.29■■■■□ 3.72
SMDT1-201ENST00000331479 TRPM2O94759 1503 aa38.29■■■■□ 3.72
SMDT1-201ENST00000331479 CLTCL1P53675 1640 aa38.22■■■■□ 3.71
SMDT1-201ENST00000331479 UBR1Q8IWV7 1749 aa38.22■■■■□ 3.71
SMDT1-201ENST00000331479 DHX57Q6P158 1386 aaKnown RBP38.16■■■■□ 3.7
SMDT1-201ENST00000331479 STAG3Q9UJ98 1225 aa38.16■■■■□ 3.7
SMDT1-201ENST00000331479 ADGRB3O60242 1522 aa38.16■■■■□ 3.7
SMDT1-201ENST00000331479 ANKRD30BQ9BXX2 1392 aa38.16■■■■□ 3.7
SMDT1-201ENST00000331479 THEMISQ8N1K5 641 aaPredicted RBP38.15■■■■□ 3.7
SMDT1-201ENST00000331479 KDM5AP29375 1690 aaKnown RBP38.14■■■■□ 3.7
SMDT1-201ENST00000331479 TMEM131LA2VDJ0 1609 aa38.14■■■■□ 3.7
SMDT1-201ENST00000331479 CHGAP10645 457 aaKnown RBP38.12■■■■□ 3.69
SMDT1-201ENST00000331479 MYO5BQ9ULV0 1848 aa38.11■■■■□ 3.69
SMDT1-201ENST00000331479 CCDC144AA2RUR9 1427 aa38.11■■■■□ 3.69
SMDT1-201ENST00000331479 KIF1BO60333 1816 aa38.05■■■■□ 3.68
SMDT1-201ENST00000331479 TMEM2Q9UHN6 1383 aa38.02■■■■□ 3.68
SMDT1-201ENST00000331479 STRCQ7RTU9 1775 aa38.02■■■■□ 3.68
SMDT1-201ENST00000331479 ARHGAP23Q9P227 1491 aa38.01■■■■□ 3.68
SMDT1-201ENST00000331479 SLIT1O75093 1534 aa38.01■■■■□ 3.68
SMDT1-201ENST00000331479 NCKAP5LQ9HCH0 1330 aa38■■■■□ 3.67
SMDT1-201ENST00000331479 LTKP29376 864 aa37.95■■■■□ 3.67
SMDT1-201ENST00000331479 ANKLE2Q86XL3 938 aa37.95■■■■□ 3.67
SMDT1-201ENST00000331479 SPATA31E1Q6ZUB1 1445 aa37.94■■■■□ 3.66
SMDT1-201ENST00000331479 ZNF326Q5BKZ1 582 aaKnown RBP37.93■■■■□ 3.66
SMDT1-201ENST00000331479 ZFYVE9O95405 1425 aa37.93■■■■□ 3.66
SMDT1-201ENST00000331479 TXNDC2Q86VQ3 553 aa37.92■■■■□ 3.66
SMDT1-201ENST00000331479 RIMS2Q9UQ26 1411 aa37.92■■■■□ 3.66
SMDT1-201ENST00000331479 POLR1AO95602 1720 aaPredicted RBP37.92■■■■□ 3.66
SMDT1-201ENST00000331479 RGL3Q3MIN7 710 aa37.89■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms