RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 PTPRKQ15262 1439 aa28.83■■■□□ 2.21
MRPL54-201ENST00000330133 ERBINQ96RT1 1412 aa28.81■■■□□ 2.2
MRPL54-201ENST00000330133 ZMYM3Q14202 1370 aa28.8■■■□□ 2.2
MRPL54-201ENST00000330133 WASHC2CQ9Y4E1 1318 aa28.8■■■□□ 2.2
MRPL54-201ENST00000330133 ROCK1Q13464 1354 aa28.77■■■□□ 2.2
MRPL54-201ENST00000330133 EIF2AK4Q9P2K8 1649 aaKnown RBP28.77■■■□□ 2.2
MRPL54-201ENST00000330133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.73■■■□□ 2.19
MRPL54-201ENST00000330133 CLTCQ00610 1675 aaKnown RBP28.72■■■□□ 2.19
MRPL54-201ENST00000330133 FAM135AQ9P2D6 1515 aa28.72■■■□□ 2.19
MRPL54-201ENST00000330133 RNF17Q9BXT8 1623 aaKnown RBP28.72■■■□□ 2.19
MRPL54-201ENST00000330133 MROH2AA6NES4 1674 aa28.71■■■□□ 2.19
MRPL54-201ENST00000330133 ANKRD50Q9ULJ7 1429 aa28.71■■■□□ 2.19
MRPL54-201ENST00000330133 KDM5DQ9BY66 1539 aa28.71■■■□□ 2.19
MRPL54-201ENST00000330133 C3P01024 1663 aa28.7■■■□□ 2.18
MRPL54-201ENST00000330133 KANK1Q14678 1352 aa28.68■■■□□ 2.18
MRPL54-201ENST00000330133 NPATQ14207 1427 aa28.65■■■□□ 2.18
MRPL54-201ENST00000330133 ABCC3O15438 1527 aa28.63■■■□□ 2.17
MRPL54-201ENST00000330133 MROH1Q8NDA8 1641 aa28.62■■■□□ 2.17
MRPL54-201ENST00000330133 UHRF1BP1Q6BDS2 1440 aa28.61■■■□□ 2.17
MRPL54-201ENST00000330133 LMTK3Q96Q04 1460 aa28.6■■■□□ 2.17
MRPL54-201ENST00000330133 PRDM15P57071 1507 aaPredicted RBP28.6■■■□□ 2.17
MRPL54-201ENST00000330133 FBXO31Q5XUX0 539 aaPredicted RBP28.59■■■□□ 2.17
MRPL54-201ENST00000330133 PZPP20742 1482 aa28.59■■■□□ 2.17
MRPL54-201ENST00000330133 DEPDC5O75140 1603 aa28.57■■■□□ 2.16
MRPL54-201ENST00000330133 ZC3H13Q5T200 1668 aaKnown RBP28.57■■■□□ 2.16
MRPL54-201ENST00000330133 SETD1BQ9UPS6 1966 aaKnown RBP28.57■■■□□ 2.16
MRPL54-201ENST00000330133 HSPA2P54652 639 aa28.55■■■□□ 2.16
MRPL54-201ENST00000330133 PREX1Q8TCU6 1659 aa28.54■■■□□ 2.16
MRPL54-201ENST00000330133 TNRQ92752 1358 aa28.52■■■□□ 2.16
MRPL54-201ENST00000330133 CEP152O94986 1710 aa28.5■■■□□ 2.15
MRPL54-201ENST00000330133 NAIPQ13075 1403 aa28.5■■■□□ 2.15
MRPL54-201ENST00000330133 ARHGAP31Q2M1Z3 1444 aa28.5■■■□□ 2.15
MRPL54-201ENST00000330133 VWDEQ8N2E2 1590 aa28.5■■■□□ 2.15
MRPL54-201ENST00000330133 LMTK2Q8IWU2 1503 aa28.48■■■□□ 2.15
MRPL54-201ENST00000330133 CAMSAP1Q5T5Y3 1602 aa28.47■■■□□ 2.15
MRPL54-201ENST00000330133 HFM1A2PYH4 1435 aa28.47■■■□□ 2.15
MRPL54-201ENST00000330133 NUP155O75694 1391 aa28.47■■■□□ 2.15
MRPL54-201ENST00000330133 ERVK-7P63135 1459 aa28.44■■■□□ 2.14
MRPL54-201ENST00000330133 UNC13BO14795 1591 aa28.44■■■□□ 2.14
MRPL54-201ENST00000330133 SPATA31D1Q6ZQQ2 1576 aa28.4■■■□□ 2.14
MRPL54-201ENST00000330133 A2ML1A8K2U0 1454 aa28.4■■■□□ 2.14
MRPL54-201ENST00000330133 MYO3AQ8NEV4 1616 aa28.39■■■□□ 2.13
MRPL54-201ENST00000330133 TRIM52Q96A61 297 aa28.38■■■□□ 2.13
MRPL54-201ENST00000330133 NLRP1Q9C000 1473 aa28.38■■■□□ 2.13
MRPL54-201ENST00000330133 GCC2Q8IWJ2 1684 aa28.38■■■□□ 2.13
MRPL54-201ENST00000330133 EFCAB6Q5THR3 1501 aa28.37■■■□□ 2.13
MRPL54-201ENST00000330133 CEP170BQ9Y4F5 1589 aaPredicted RBP28.37■■■□□ 2.13
MRPL54-201ENST00000330133 RPRD2Q5VT52 1461 aaKnown RBP28.34■■■□□ 2.13
MRPL54-201ENST00000330133 THEMISQ8N1K5 641 aaPredicted RBP28.33■■■□□ 2.13
MRPL54-201ENST00000330133 IQGAP3Q86VI3 1631 aa28.32■■■□□ 2.12
MRPL54-201ENST00000330133 TET3O43151 1660 aa28.32■■■□□ 2.12
MRPL54-201ENST00000330133 ZNF142P52746 1687 aaPredicted RBP28.32■■■□□ 2.12
MRPL54-201ENST00000330133 DMRT2Q9Y5R5 561 aa28.3■■■□□ 2.12
MRPL54-201ENST00000330133 CFAP65Q6ZU64 1925 aaKnown RBP28.3■■■□□ 2.12
MRPL54-201ENST00000330133 NOS1P29475 1434 aa28.29■■■□□ 2.12
MRPL54-201ENST00000330133 SETD5Q9C0A6 1442 aa28.28■■■□□ 2.12
MRPL54-201ENST00000330133 SLC52A1Q9NWF4 448 aa28.27■■■□□ 2.12
MRPL54-201ENST00000330133 ACIN1Q9UKV3 1341 aaKnown RBP28.26■■■□□ 2.11
MRPL54-201ENST00000330133 UGGT1Q9NYU2 1555 aa28.26■■■□□ 2.11
MRPL54-201ENST00000330133 PKD2Q13563 968 aa28.26■■■□□ 2.11
MRPL54-201ENST00000330133 IDI1Q13907 227 aa28.26■■■□□ 2.11
MRPL54-201ENST00000330133 STAG3Q9UJ98 1225 aa28.26■■■□□ 2.11
MRPL54-201ENST00000330133 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
MRPL54-201ENST00000330133 PLA2R1Q13018 1463 aa28.24■■■□□ 2.11
MRPL54-201ENST00000330133 SLC4A1APQ9BWU0 796 aaKnown RBP28.23■■■□□ 2.11
MRPL54-201ENST00000330133 ANKLE2Q86XL3 938 aa28.21■■■□□ 2.11
MRPL54-201ENST00000330133 SYNMO15061 1565 aa28.2■■■□□ 2.1
MRPL54-201ENST00000330133 E9PCH4 1651 aa28.19■■■□□ 2.1
MRPL54-201ENST00000330133 STRCQ7RTU9 1775 aa28.18■■■□□ 2.1
MRPL54-201ENST00000330133 PTPRTO14522 1441 aa28.18■■■□□ 2.1
MRPL54-201ENST00000330133 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
MRPL54-201ENST00000330133 CHGAP10645 457 aaKnown RBP28.13■■■□□ 2.09
MRPL54-201ENST00000330133 MPHOSPH9Q99550 1183 aa28.13■■■□□ 2.09
MRPL54-201ENST00000330133 PIK3C2BO00750 1634 aa28.13■■■□□ 2.09
MRPL54-201ENST00000330133 EID1Q9Y6B2 187 aa28.11■■■□□ 2.09
MRPL54-201ENST00000330133 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
MRPL54-201ENST00000330133 HRCP23327 699 aa28.1■■■□□ 2.09
MRPL54-201ENST00000330133 TXNDC2Q86VQ3 553 aa28.1■■■□□ 2.09
MRPL54-201ENST00000330133 TMEM2Q9UHN6 1383 aa28.08■■■□□ 2.09
MRPL54-201ENST00000330133 ADGRB3O60242 1522 aa28.07■■■□□ 2.08
MRPL54-201ENST00000330133 LTKP29376 864 aa28.05■■■□□ 2.08
MRPL54-201ENST00000330133 ARHGAP23Q9P227 1491 aa28.05■■■□□ 2.08
MRPL54-201ENST00000330133 SLIT1O75093 1534 aa28.04■■■□□ 2.08
MRPL54-201ENST00000330133 FOXD1Q16676 465 aa28.04■■■□□ 2.08
MRPL54-201ENST00000330133 KDM5AP29375 1690 aaKnown RBP28.03■■■□□ 2.08
MRPL54-201ENST00000330133 NPHP4O75161 1426 aaPredicted RBP28.03■■■□□ 2.08
MRPL54-201ENST00000330133 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
MRPL54-201ENST00000330133 SCAF11Q99590 1463 aaKnown RBP28.02■■■□□ 2.08
MRPL54-201ENST00000330133 SPHKAPQ2M3C7 1700 aa28.01■■■□□ 2.07
MRPL54-201ENST00000330133 MED14O60244 1454 aa28.01■■■□□ 2.07
MRPL54-201ENST00000330133 TRIM26Q12899 539 aaPredicted RBP28■■■□□ 2.07
MRPL54-201ENST00000330133 TRPM2O94759 1503 aa27.99■■■□□ 2.07
MRPL54-201ENST00000330133 POLR1AO95602 1720 aaPredicted RBP27.99■■■□□ 2.07
MRPL54-201ENST00000330133 NEURL4Q96JN8 1562 aa27.99■■■□□ 2.07
MRPL54-201ENST00000330133 TMEM131LA2VDJ0 1609 aa27.97■■■□□ 2.07
MRPL54-201ENST00000330133 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.97■■■□□ 2.07
MRPL54-201ENST00000330133 RIMS2Q9UQ26 1411 aa27.95■■■□□ 2.07
MRPL54-201ENST00000330133 PPP1R15AO75807 674 aaPredicted RBP27.95■■■□□ 2.06
MRPL54-201ENST00000330133 ZNF326Q5BKZ1 582 aaKnown RBP27.95■■■□□ 2.06
MRPL54-201ENST00000330133 BCANQ96GW7 911 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms