RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 MROH1Q8NDA8 1641 aa30.51■■■□□ 2.47
RAB11B-201ENST00000328024 PPP6R1Q9UPN7 881 aa30.47■■■□□ 2.47
RAB11B-201ENST00000328024 CEBPAP49715 358 aaPredicted RBP30.46■■■□□ 2.47
RAB11B-201ENST00000328024 NAIPQ13075 1403 aa30.46■■■□□ 2.47
RAB11B-201ENST00000328024 CLTCQ00610 1675 aaKnown RBP30.45■■■□□ 2.47
RAB11B-201ENST00000328024 PLPPR3Q6T4P5 718 aa30.45■■■□□ 2.46
RAB11B-201ENST00000328024 ESF1Q9H501 851 aaKnown RBP30.45■■■□□ 2.46
RAB11B-201ENST00000328024 AEBP2Q6ZN18 517 aaPredicted RBP30.43■■■□□ 2.46
RAB11B-201ENST00000328024 DEPDC5O75140 1603 aa30.43■■■□□ 2.46
RAB11B-201ENST00000328024 CNTLNQ9NXG0 1405 aa30.43■■■□□ 2.46
RAB11B-201ENST00000328024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.42■■■□□ 2.463e-7■■□□□ 11.6
RAB11B-201ENST00000328024 WASHC2CQ9Y4E1 1318 aa30.41■■■□□ 2.46
RAB11B-201ENST00000328024 HFM1A2PYH4 1435 aa30.41■■■□□ 2.46
RAB11B-201ENST00000328024 PRDM15P57071 1507 aaPredicted RBP30.41■■■□□ 2.46
RAB11B-201ENST00000328024 ZMYM3Q14202 1370 aa30.41■■■□□ 2.46
RAB11B-201ENST00000328024 KDM5DQ9BY66 1539 aa30.39■■■□□ 2.46
RAB11B-201ENST00000328024 C3P01024 1663 aa30.38■■■□□ 2.45
RAB11B-201ENST00000328024 GCC2Q8IWJ2 1684 aa30.38■■■□□ 2.45
RAB11B-201ENST00000328024 ABCC3O15438 1527 aa30.38■■■□□ 2.45
RAB11B-201ENST00000328024 MROH2AA6NES4 1674 aa30.37■■■□□ 2.45
RAB11B-201ENST00000328024 FAM135AQ9P2D6 1515 aa30.35■■■□□ 2.45
RAB11B-201ENST00000328024 VWDEQ8N2E2 1590 aa30.34■■■□□ 2.45
RAB11B-201ENST00000328024 CEP152O94986 1710 aa30.34■■■□□ 2.45
RAB11B-201ENST00000328024 UNC13BO14795 1591 aa30.32■■■□□ 2.44
RAB11B-201ENST00000328024 ZC3H13Q5T200 1668 aaKnown RBP30.3■■■□□ 2.44
RAB11B-201ENST00000328024 KANK1Q14678 1352 aa30.29■■■□□ 2.44
RAB11B-201ENST00000328024 FBXO31Q5XUX0 539 aaPredicted RBP30.26■■■□□ 2.44
RAB11B-201ENST00000328024 LMTK2Q8IWU2 1503 aa30.26■■■□□ 2.43
RAB11B-201ENST00000328024 CAMSAP1Q5T5Y3 1602 aa30.25■■■□□ 2.43
RAB11B-201ENST00000328024 NUP155O75694 1391 aa30.24■■■□□ 2.43
RAB11B-201ENST00000328024 PZPP20742 1482 aa30.24■■■□□ 2.43
RAB11B-201ENST00000328024 SETD5Q9C0A6 1442 aa30.21■■■□□ 2.43
RAB11B-201ENST00000328024 IQGAP3Q86VI3 1631 aa30.19■■■□□ 2.42
RAB11B-201ENST00000328024 NPATQ14207 1427 aa30.19■■■□□ 2.42
RAB11B-201ENST00000328024 ARHGAP31Q2M1Z3 1444 aa30.19■■■□□ 2.42
RAB11B-201ENST00000328024 EFCAB6Q5THR3 1501 aa30.16■■■□□ 2.42
RAB11B-201ENST00000328024 CFAP65Q6ZU64 1925 aaKnown RBP30.14■■■□□ 2.42
RAB11B-201ENST00000328024 TET3O43151 1660 aa30.14■■■□□ 2.42
RAB11B-201ENST00000328024 TRIM26Q12899 539 aaPredicted RBP30.14■■■□□ 2.42
RAB11B-201ENST00000328024 TRIM52Q96A61 297 aa30.14■■■□□ 2.42
RAB11B-201ENST00000328024 RAB3GAP2Q9H2M9 1393 aa30.14■■■□□ 2.42
RAB11B-201ENST00000328024 SETD1BQ9UPS6 1966 aaKnown RBP30.14■■■□□ 2.41
RAB11B-201ENST00000328024 ERVK-7P63135 1459 aa30.12■■■□□ 2.41
RAB11B-201ENST00000328024 SPATA31D1Q6ZQQ2 1576 aa30.11■■■□□ 2.41
RAB11B-201ENST00000328024 LMTK3Q96Q04 1460 aa30.11■■■□□ 2.41
RAB11B-201ENST00000328024 TNRQ92752 1358 aa30.1■■■□□ 2.41
RAB11B-201ENST00000328024 PREX1Q8TCU6 1659 aa30.09■■■□□ 2.41
RAB11B-201ENST00000328024 E9PCH4 1651 aa30.08■■■□□ 2.41
RAB11B-201ENST00000328024 UHRF1BP1Q6BDS2 1440 aa30.06■■■□□ 2.4
RAB11B-201ENST00000328024 MYO3AQ8NEV4 1616 aa30.05■■■□□ 2.4
RAB11B-201ENST00000328024 RPRD2Q5VT52 1461 aaKnown RBP30.04■■■□□ 2.4
RAB11B-201ENST00000328024 NOS1P29475 1434 aa30.03■■■□□ 2.4
RAB11B-201ENST00000328024 HSPA2P54652 639 aa30.03■■■□□ 2.4
RAB11B-201ENST00000328024 SLC4A1APQ9BWU0 796 aaKnown RBP30■■■□□ 2.39
RAB11B-201ENST00000328024 SYNMO15061 1565 aa30■■■□□ 2.39
RAB11B-201ENST00000328024 HRCP23327 699 aa29.99■■■□□ 2.39
RAB11B-201ENST00000328024 PKD2Q13563 968 aa29.98■■■□□ 2.39
RAB11B-201ENST00000328024 MPHOSPH9Q99550 1183 aa29.98■■■□□ 2.39
RAB11B-201ENST00000328024 CEP170BQ9Y4F5 1589 aaPredicted RBP29.96■■■□□ 2.39
RAB11B-201ENST00000328024 A2ML1A8K2U0 1454 aa29.95■■■□□ 2.39
RAB11B-201ENST00000328024 NLRP1Q9C000 1473 aa29.95■■■□□ 2.39
RAB11B-201ENST00000328024 ZNF142P52746 1687 aaPredicted RBP29.95■■■□□ 2.39
RAB11B-201ENST00000328024 IDI1Q13907 227 aa29.94■■■□□ 2.38
RAB11B-201ENST00000328024 FOXD1Q16676 465 aa29.93■■■□□ 2.38
RAB11B-201ENST00000328024 ACIN1Q9UKV3 1341 aaKnown RBP29.92■■■□□ 2.38
RAB11B-201ENST00000328024 PTPRTO14522 1441 aa29.91■■■□□ 2.38
RAB11B-201ENST00000328024 UGGT1Q9NYU2 1555 aa29.9■■■□□ 2.38
RAB11B-201ENST00000328024 PLA2R1Q13018 1463 aa29.89■■■□□ 2.38
RAB11B-201ENST00000328024 PIK3C2BO00750 1634 aa29.87■■■□□ 2.37
RAB11B-201ENST00000328024 SPHKAPQ2M3C7 1700 aa29.86■■■□□ 2.37
RAB11B-201ENST00000328024 SLC52A1Q9NWF4 448 aa29.86■■■□□ 2.37
RAB11B-201ENST00000328024 UBR1Q8IWV7 1749 aa29.83■■■□□ 2.37
RAB11B-201ENST00000328024 TRPM2O94759 1503 aa29.81■■■□□ 2.36
RAB11B-201ENST00000328024 PCGF6Q9BYE7 350 aa29.8■■■□□ 2.36
RAB11B-201ENST00000328024 THEMISQ8N1K5 641 aaPredicted RBP29.8■■■□□ 2.36
RAB11B-201ENST00000328024 STRCQ7RTU9 1775 aa29.78■■■□□ 2.36
RAB11B-201ENST00000328024 CLTCL1P53675 1640 aa29.76■■■□□ 2.36
RAB11B-201ENST00000328024 STAG3Q9UJ98 1225 aa29.75■■■□□ 2.35
RAB11B-201ENST00000328024 ADGRB3O60242 1522 aa29.75■■■□□ 2.35
RAB11B-201ENST00000328024 NCKAP5LQ9HCH0 1330 aa29.75■■■□□ 2.35
RAB11B-201ENST00000328024 TMEM131LA2VDJ0 1609 aa29.75■■■□□ 2.35
RAB11B-201ENST00000328024 KDM5AP29375 1690 aaKnown RBP29.73■■■□□ 2.35
RAB11B-201ENST00000328024 MYO5BQ9ULV0 1848 aa29.72■■■□□ 2.35
RAB11B-201ENST00000328024 CHGAP10645 457 aaKnown RBP29.72■■■□□ 2.35
RAB11B-201ENST00000328024 ARHGAP23Q9P227 1491 aa29.7■■■□□ 2.34
RAB11B-201ENST00000328024 TMEM2Q9UHN6 1383 aa29.69■■■□□ 2.34
RAB11B-201ENST00000328024 SLIT1O75093 1534 aa29.69■■■□□ 2.34
RAB11B-201ENST00000328024 LTKP29376 864 aa29.67■■■□□ 2.34
RAB11B-201ENST00000328024 ANKRD30BQ9BXX2 1392 aa29.67■■■□□ 2.34
RAB11B-201ENST00000328024 ANKLE2Q86XL3 938 aa29.66■■■□□ 2.34
RAB11B-201ENST00000328024 NEURL4Q96JN8 1562 aa29.64■■■□□ 2.34
RAB11B-201ENST00000328024 CCDC144AA2RUR9 1427 aa29.63■■■□□ 2.33
RAB11B-201ENST00000328024 TXNDC2Q86VQ3 553 aa29.62■■■□□ 2.33
RAB11B-201ENST00000328024 POLR1AO95602 1720 aaPredicted RBP29.61■■■□□ 2.33
RAB11B-201ENST00000328024 ZFYVE9O95405 1425 aa29.61■■■□□ 2.33
RAB11B-201ENST00000328024 DHX57Q6P158 1386 aaKnown RBP29.61■■■□□ 2.33
RAB11B-201ENST00000328024 KIF1BO60333 1816 aa29.6■■■□□ 2.33
RAB11B-201ENST00000328024 RIMS2Q9UQ26 1411 aa29.59■■■□□ 2.33
RAB11B-201ENST00000328024 SCAF11Q99590 1463 aaKnown RBP29.59■■■□□ 2.33
RAB11B-201ENST00000328024 NUTM2DQ5VT03 806 aaPredicted RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms