RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 BRPF3Q9ULD4 1205 aa13.26□□□□□ -0.29
SCMH1-201ENST00000326197 PANK3Q9H999 370 aa13.26□□□□□ -0.29
SCMH1-201ENST00000326197 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
SCMH1-201ENST00000326197 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
SCMH1-201ENST00000326197 CAMSAP2Q08AD1 1489 aa13.25□□□□□ -0.29
SCMH1-201ENST00000326197 HNRNPMP52272 730 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■■□□□ 13.9
SCMH1-201ENST00000326197 GSE1Q14687 1217 aa13.25□□□□□ -0.29
SCMH1-201ENST00000326197 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
SCMH1-201ENST00000326197 NFKBIBQ15653 356 aa13.25□□□□□ -0.29
SCMH1-201ENST00000326197 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
SCMH1-201ENST00000326197 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
SCMH1-201ENST00000326197 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
SCMH1-201ENST00000326197 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
SCMH1-201ENST00000326197 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
SCMH1-201ENST00000326197 CANXP27824 592 aaKnown RBP13.21□□□□□ -0.29
SCMH1-201ENST00000326197 TMF1P82094 1093 aa13.21□□□□□ -0.29
SCMH1-201ENST00000326197 KNSTRNQ9Y448 316 aa13.21□□□□□ -0.29
SCMH1-201ENST00000326197 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.29
SCMH1-201ENST00000326197 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
SCMH1-201ENST00000326197 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.3
SCMH1-201ENST00000326197 KIF14Q15058 1648 aa13.2□□□□□ -0.3
SCMH1-201ENST00000326197 KDM5CP41229 1560 aa13.2□□□□□ -0.3
SCMH1-201ENST00000326197 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
SCMH1-201ENST00000326197 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
SCMH1-201ENST00000326197 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
SCMH1-201ENST00000326197 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
SCMH1-201ENST00000326197 MBD5Q9P267 1494 aa13.19□□□□□ -0.3
SCMH1-201ENST00000326197 ARXQ96QS3 562 aa13.18□□□□□ -0.3
SCMH1-201ENST00000326197 CCDC144AA2RUR9 1427 aa13.18□□□□□ -0.3
SCMH1-201ENST00000326197 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
SCMH1-201ENST00000326197 GPATCH8Q9UKJ3 1502 aaKnown RBP13.17□□□□□ -0.3
SCMH1-201ENST00000326197 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
SCMH1-201ENST00000326197 CCDC146Q8IYE0 955 aa13.17□□□□□ -0.3
SCMH1-201ENST00000326197 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
SCMH1-201ENST00000326197 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
SCMH1-201ENST00000326197 PLB1Q6P1J6 1458 aa13.15□□□□□ -0.3
SCMH1-201ENST00000326197 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
SCMH1-201ENST00000326197 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
SCMH1-201ENST00000326197 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
SCMH1-201ENST00000326197 WASHC2CQ9Y4E1 1318 aa13.13□□□□□ -0.31
SCMH1-201ENST00000326197 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
SCMH1-201ENST00000326197 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
SCMH1-201ENST00000326197 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
SCMH1-201ENST00000326197 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
SCMH1-201ENST00000326197 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
SCMH1-201ENST00000326197 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
SCMH1-201ENST00000326197 CARMIL2Q6F5E8 1435 aa13.11□□□□□ -0.31
SCMH1-201ENST00000326197 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
SCMH1-201ENST00000326197 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
SCMH1-201ENST00000326197 DISP1Q96F81 1524 aa13.1□□□□□ -0.31
SCMH1-201ENST00000326197 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
SCMH1-201ENST00000326197 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
SCMH1-201ENST00000326197 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
SCMH1-201ENST00000326197 ARHGEF12Q9NZN5 1544 aa13.09□□□□□ -0.31
SCMH1-201ENST00000326197 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
SCMH1-201ENST00000326197 BECN1Q14457 450 aa13.09□□□□□ -0.31
SCMH1-201ENST00000326197 APAF1O14727 1248 aa13.09□□□□□ -0.31
SCMH1-201ENST00000326197 DUSP27Q5VZP5 1158 aa13.08□□□□□ -0.31
SCMH1-201ENST00000326197 ADGRL2O95490 1459 aa13.08□□□□□ -0.31
SCMH1-201ENST00000326197 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.32
SCMH1-201ENST00000326197 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
SCMH1-201ENST00000326197 ERBINQ96RT1 1412 aa13.08□□□□□ -0.32
SCMH1-201ENST00000326197 C8orf34Q49A92 452 aa13.08□□□□□ -0.32
SCMH1-201ENST00000326197 ADGBQ8N7X0 1667 aa13.07□□□□□ -0.32
SCMH1-201ENST00000326197 BCAR3O75815 825 aa13.07□□□□□ -0.32
SCMH1-201ENST00000326197 TESK2Q96S53 571 aa13.07□□□□□ -0.32
SCMH1-201ENST00000326197 PRAG1Q86YV5 1406 aa13.06□□□□□ -0.32
SCMH1-201ENST00000326197 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
SCMH1-201ENST00000326197 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
SCMH1-201ENST00000326197 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
SCMH1-201ENST00000326197 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
SCMH1-201ENST00000326197 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
SCMH1-201ENST00000326197 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
SCMH1-201ENST00000326197 GRIN2AQ12879 1464 aa13.03□□□□□ -0.32
SCMH1-201ENST00000326197 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
SCMH1-201ENST00000326197 PLEKHH2Q8IVE3 1493 aa13.03□□□□□ -0.32
SCMH1-201ENST00000326197 SLFN5Q08AF3 891 aa13.03□□□□□ -0.32
SCMH1-201ENST00000326197 PANK1Q8TE04 598 aa13.02□□□□□ -0.32
SCMH1-201ENST00000326197 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
SCMH1-201ENST00000326197 COL17A1Q9UMD9 1497 aaPredicted RBP13.01□□□□□ -0.33
SCMH1-201ENST00000326197 POGKQ9P215 609 aa13.01□□□□□ -0.33
SCMH1-201ENST00000326197 CENPJQ9HC77 1338 aaPredicted RBP13.01□□□□□ -0.33
SCMH1-201ENST00000326197 ZMYM4Q5VZL5 1548 aa13.01□□□□□ -0.33
SCMH1-201ENST00000326197 E9PSI1 815 aa13□□□□□ -0.33
SCMH1-201ENST00000326197 IFT140Q96RY7 1462 aa13□□□□□ -0.33
SCMH1-201ENST00000326197 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
SCMH1-201ENST00000326197 GZF1Q9H116 711 aaPredicted RBP13□□□□□ -0.33
SCMH1-201ENST00000326197 RRP7AQ9Y3A4 280 aaKnown RBP13□□□□□ -0.33
SCMH1-201ENST00000326197 FAM135AQ9P2D6 1515 aa12.99□□□□□ -0.33
SCMH1-201ENST00000326197 IGHDP01880 384 aa12.99□□□□□ -0.33
SCMH1-201ENST00000326197 CLUAP1Q96AJ1 413 aa12.99□□□□□ -0.33
SCMH1-201ENST00000326197 BCL2L13Q9BXK5 485 aa12.99□□□□□ -0.33
SCMH1-201ENST00000326197 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
SCMH1-201ENST00000326197 CGNL1Q0VF96 1302 aa12.98□□□□□ -0.33
SCMH1-201ENST00000326197 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
SCMH1-201ENST00000326197 A2MP01023 1474 aa12.97□□□□□ -0.33
SCMH1-201ENST00000326197 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
SCMH1-201ENST00000326197 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
SCMH1-201ENST00000326197 CCDC141Q6ZP82 1450 aa12.96□□□□□ -0.33
SCMH1-201ENST00000326197 SHANK2Q9UPX8 1470 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms