RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 A2MP01023 1474 aa20.92■□□□□ 0.94
MSRA-201ENST00000317173 KIF15Q9NS87 1388 aa20.89■□□□□ 0.94
MSRA-201ENST00000317173 ESF1Q9H501 851 aaKnown RBP20.88■□□□□ 0.93
MSRA-201ENST00000317173 DUOX2Q9NRD8 1548 aa20.87■□□□□ 0.93
MSRA-201ENST00000317173 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
MSRA-201ENST00000317173 ANKRD50Q9ULJ7 1429 aa20.86■□□□□ 0.93
MSRA-201ENST00000317173 DHX29Q7Z478 1369 aaKnown RBP20.84■□□□□ 0.93
MSRA-201ENST00000317173 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
MSRA-201ENST00000317173 ERBINQ96RT1 1412 aa20.83■□□□□ 0.92
MSRA-201ENST00000317173 DHX57Q6P158 1386 aaKnown RBP20.82■□□□□ 0.92
MSRA-201ENST00000317173 LMTK3Q96Q04 1460 aa20.81■□□□□ 0.92
MSRA-201ENST00000317173 CCER1Q8TC90 406 aaPredicted RBP20.81■□□□□ 0.92
MSRA-201ENST00000317173 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
MSRA-201ENST00000317173 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
MSRA-201ENST00000317173 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
MSRA-201ENST00000317173 MROH2AA6NES4 1674 aa20.79■□□□□ 0.92
MSRA-201ENST00000317173 CEBPAP49715 358 aaPredicted RBP20.78■□□□□ 0.92
MSRA-201ENST00000317173 C3P01024 1663 aa20.77■□□□□ 0.92
MSRA-201ENST00000317173 GGT6Q6P531 493 aa20.76■□□□□ 0.91
MSRA-201ENST00000317173 UNC13BO14795 1591 aa20.76■□□□□ 0.91
MSRA-201ENST00000317173 KDM5DQ9BY66 1539 aa20.75■□□□□ 0.91
MSRA-201ENST00000317173 PREX1Q8TCU6 1659 aa20.75■□□□□ 0.91
MSRA-201ENST00000317173 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
MSRA-201ENST00000317173 KIF3BO15066 747 aa20.73■□□□□ 0.91
MSRA-201ENST00000317173 SETD1BQ9UPS6 1966 aaKnown RBP20.73■□□□□ 0.91
MSRA-201ENST00000317173 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
MSRA-201ENST00000317173 CLTCQ00610 1675 aaKnown RBP20.72■□□□□ 0.91
MSRA-201ENST00000317173 NPATQ14207 1427 aa20.71■□□□□ 0.91
MSRA-201ENST00000317173 UHRF1BP1Q6BDS2 1440 aa20.71■□□□□ 0.91
MSRA-201ENST00000317173 DEPDC5O75140 1603 aa20.71■□□□□ 0.91
MSRA-201ENST00000317173 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
MSRA-201ENST00000317173 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
MSRA-201ENST00000317173 IQGAP3Q86VI3 1631 aa20.67■□□□□ 0.9
MSRA-201ENST00000317173 HSPA2P54652 639 aa20.67■□□□□ 0.9
MSRA-201ENST00000317173 PZPP20742 1482 aa20.66■□□□□ 0.9
MSRA-201ENST00000317173 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
MSRA-201ENST00000317173 NUP155O75694 1391 aa20.65■□□□□ 0.9
MSRA-201ENST00000317173 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.9
MSRA-201ENST00000317173 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
MSRA-201ENST00000317173 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
MSRA-201ENST00000317173 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
MSRA-201ENST00000317173 VWDEQ8N2E2 1590 aa20.6■□□□□ 0.89
MSRA-201ENST00000317173 MROH1Q8NDA8 1641 aa20.6■□□□□ 0.89
MSRA-201ENST00000317173 ZC3H13Q5T200 1668 aaKnown RBP20.59■□□□□ 0.89
MSRA-201ENST00000317173 KANK1Q14678 1352 aa20.58■□□□□ 0.88
MSRA-201ENST00000317173 MYO3AQ8NEV4 1616 aa20.57■□□□□ 0.88
MSRA-201ENST00000317173 ABCC3O15438 1527 aa20.56■□□□□ 0.88
MSRA-201ENST00000317173 TET3O43151 1660 aa20.56■□□□□ 0.88
MSRA-201ENST00000317173 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
MSRA-201ENST00000317173 LMTK2Q8IWU2 1503 aa20.54■□□□□ 0.88
MSRA-201ENST00000317173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
MSRA-201ENST00000317173 TNRQ92752 1358 aa20.52■□□□□ 0.88
MSRA-201ENST00000317173 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
MSRA-201ENST00000317173 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.87
MSRA-201ENST00000317173 PKD2Q13563 968 aa20.51■□□□□ 0.87
MSRA-201ENST00000317173 ANKRD30BQ9BXX2 1392 aa20.5■□□□□ 0.87
MSRA-201ENST00000317173 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
MSRA-201ENST00000317173 FBXO31Q5XUX0 539 aaPredicted RBP20.49■□□□□ 0.87
MSRA-201ENST00000317173 CEP152O94986 1710 aa20.49■□□□□ 0.87
MSRA-201ENST00000317173 STRCQ7RTU9 1775 aa20.49■□□□□ 0.87
MSRA-201ENST00000317173 CAMSAP1Q5T5Y3 1602 aa20.48■□□□□ 0.87
MSRA-201ENST00000317173 E9PCH4 1651 aa20.48■□□□□ 0.87
MSRA-201ENST00000317173 EFCAB6Q5THR3 1501 aa20.47■□□□□ 0.87
MSRA-201ENST00000317173 PLA2R1Q13018 1463 aa20.47■□□□□ 0.87
MSRA-201ENST00000317173 NLRP1Q9C000 1473 aa20.47■□□□□ 0.87
MSRA-201ENST00000317173 TIMELESSQ9UNS1 1208 aa20.47■□□□□ 0.87
MSRA-201ENST00000317173 ARHGAP31Q2M1Z3 1444 aa20.46■□□□□ 0.87
MSRA-201ENST00000317173 SPATA31D1Q6ZQQ2 1576 aa20.45■□□□□ 0.86
MSRA-201ENST00000317173 PTPRTO14522 1441 aa20.45■□□□□ 0.86
MSRA-201ENST00000317173 ERVK-7P63135 1459 aa20.45■□□□□ 0.86
MSRA-201ENST00000317173 RPRD2Q5VT52 1461 aaKnown RBP20.44■□□□□ 0.86
MSRA-201ENST00000317173 FOXD1Q16676 465 aa20.43■□□□□ 0.86
MSRA-201ENST00000317173 SPHKAPQ2M3C7 1700 aa20.42■□□□□ 0.86
MSRA-201ENST00000317173 SIN3AQ96ST3 1273 aa20.41■□□□□ 0.86
MSRA-201ENST00000317173 TRPM2O94759 1503 aa20.38■□□□□ 0.85
MSRA-201ENST00000317173 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
MSRA-201ENST00000317173 UGGT1Q9NYU2 1555 aa20.37■□□□□ 0.85
MSRA-201ENST00000317173 THEMISQ8N1K5 641 aaPredicted RBP20.37■□□□□ 0.85
MSRA-201ENST00000317173 TONSLQ96HA7 1378 aa20.36■□□□□ 0.85
MSRA-201ENST00000317173 CCDC144AA2RUR9 1427 aa20.35■□□□□ 0.85
MSRA-201ENST00000317173 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
MSRA-201ENST00000317173 CFAP65Q6ZU64 1925 aaKnown RBP20.32■□□□□ 0.84
MSRA-201ENST00000317173 ILDR1Q86SU0 546 aaPredicted RBP20.31■□□□□ 0.84
MSRA-201ENST00000317173 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
MSRA-201ENST00000317173 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
MSRA-201ENST00000317173 CERKQ8TCT0 537 aa20.29■□□□□ 0.84
MSRA-201ENST00000317173 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
MSRA-201ENST00000317173 NOS1P29475 1434 aa20.29■□□□□ 0.84
MSRA-201ENST00000317173 CLTCL1P53675 1640 aa20.28■□□□□ 0.84
MSRA-201ENST00000317173 FBXO41Q8TF61 875 aa20.28■□□□□ 0.84
MSRA-201ENST00000317173 UBR1Q8IWV7 1749 aa20.28■□□□□ 0.84
MSRA-201ENST00000317173 KIF1BO60333 1816 aa20.26■□□□□ 0.83
MSRA-201ENST00000317173 SYNMO15061 1565 aa20.25■□□□□ 0.83
MSRA-201ENST00000317173 KDM5AP29375 1690 aaKnown RBP20.24■□□□□ 0.83
MSRA-201ENST00000317173 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
MSRA-201ENST00000317173 MED14O60244 1454 aa20.24■□□□□ 0.83
MSRA-201ENST00000317173 SLC52A1Q9NWF4 448 aa20.24■□□□□ 0.83
MSRA-201ENST00000317173 LTBP4Q8N2S1 1624 aa20.23■□□□□ 0.83
MSRA-201ENST00000317173 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
MSRA-201ENST00000317173 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms