RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 KIF3BO15066 747 aa27.28■■□□□ 1.96
CCS-201ENST00000310190 KDM5DQ9BY66 1539 aa27.26■■□□□ 1.96
CCS-201ENST00000310190 C3P01024 1663 aa27.25■■□□□ 1.95
CCS-201ENST00000310190 DEPDC5O75140 1603 aa27.24■■□□□ 1.95
CCS-201ENST00000310190 MROH1Q8NDA8 1641 aa27.24■■□□□ 1.95
CCS-201ENST00000310190 GGT6Q6P531 493 aa27.24■■□□□ 1.95
CCS-201ENST00000310190 RRP7BPQ9NSQ0 103 aa27.24■■□□□ 1.95
CCS-201ENST00000310190 ESF1Q9H501 851 aaKnown RBP27.23■■□□□ 1.95
CCS-201ENST00000310190 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
CCS-201ENST00000310190 PRDM15P57071 1507 aaPredicted RBP27.21■■□□□ 1.95
CCS-201ENST00000310190 CLTCQ00610 1675 aaKnown RBP27.21■■□□□ 1.95
CCS-201ENST00000310190 ZC3H13Q5T200 1668 aaKnown RBP27.21■■□□□ 1.95
CCS-201ENST00000310190 CHIC2Q9UKJ5 165 aa27.21■■□□□ 1.95
CCS-201ENST00000310190 NPATQ14207 1427 aa27.21■■□□□ 1.95
CCS-201ENST00000310190 ANKRD50Q9ULJ7 1429 aa27.17■■□□□ 1.94
CCS-201ENST00000310190 VWDEQ8N2E2 1590 aa27.16■■□□□ 1.94
CCS-201ENST00000310190 ABCC3O15438 1527 aa27.15■■□□□ 1.94
CCS-201ENST00000310190 PREX1Q8TCU6 1659 aa27.13■■□□□ 1.93
CCS-201ENST00000310190 WASHC2CQ9Y4E1 1318 aa27.13■■□□□ 1.93
CCS-201ENST00000310190 LMTK2Q8IWU2 1503 aa27.12■■□□□ 1.93
CCS-201ENST00000310190 CEBPAP49715 358 aaPredicted RBP27.12■■□□□ 1.93
CCS-201ENST00000310190 PZPP20742 1482 aa27.12■■□□□ 1.93
CCS-201ENST00000310190 LMTK3Q96Q04 1460 aa27.12■■□□□ 1.93
CCS-201ENST00000310190 ARHGAP31Q2M1Z3 1444 aa27.1■■□□□ 1.93
CCS-201ENST00000310190 UNC13BO14795 1591 aa27.06■■□□□ 1.92
CCS-201ENST00000310190 KANK1Q14678 1352 aa27.05■■□□□ 1.92
CCS-201ENST00000310190 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
CCS-201ENST00000310190 HFM1A2PYH4 1435 aa27.03■■□□□ 1.92
CCS-201ENST00000310190 CEP152O94986 1710 aa27.03■■□□□ 1.92
CCS-201ENST00000310190 NAIPQ13075 1403 aa27.02■■□□□ 1.92
CCS-201ENST00000310190 UHRF1BP1Q6BDS2 1440 aa27.02■■□□□ 1.92
CCS-201ENST00000310190 GCC2Q8IWJ2 1684 aa27.01■■□□□ 1.92
CCS-201ENST00000310190 SPATA31D1Q6ZQQ2 1576 aa27■■□□□ 1.91
CCS-201ENST00000310190 ZNF142P52746 1687 aaPredicted RBP26.99■■□□□ 1.91
CCS-201ENST00000310190 ITGAEP38570 1179 aa26.99■■□□□ 1.91
CCS-201ENST00000310190 IQGAP3Q86VI3 1631 aa26.95■■□□□ 1.91
CCS-201ENST00000310190 MYO3AQ8NEV4 1616 aa26.95■■□□□ 1.91
CCS-201ENST00000310190 EFCAB6Q5THR3 1501 aa26.95■■□□□ 1.9
CCS-201ENST00000310190 RPRD2Q5VT52 1461 aaKnown RBP26.94■■□□□ 1.9
CCS-201ENST00000310190 ERVK-7P63135 1459 aa26.93■■□□□ 1.9
CCS-201ENST00000310190 NLRP1Q9C000 1473 aa26.93■■□□□ 1.9
CCS-201ENST00000310190 TET3O43151 1660 aa26.93■■□□□ 1.9
CCS-201ENST00000310190 TNRQ92752 1358 aa26.93■■□□□ 1.9
CCS-201ENST00000310190 FBXO31Q5XUX0 539 aaPredicted RBP26.92■■□□□ 1.9
CCS-201ENST00000310190 PLPPR3Q6T4P5 718 aa26.92■■□□□ 1.9
CCS-201ENST00000310190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.91■■□□□ 1.94e-7■■■□□ 17.7
CCS-201ENST00000310190 A2ML1A8K2U0 1454 aa26.91■■□□□ 1.9
CCS-201ENST00000310190 CEP170BQ9Y4F5 1589 aaPredicted RBP26.9■■□□□ 1.9
CCS-201ENST00000310190 ACIN1Q9UKV3 1341 aaKnown RBP26.88■■□□□ 1.89
CCS-201ENST00000310190 NOS1P29475 1434 aa26.87■■□□□ 1.89
CCS-201ENST00000310190 NUP155O75694 1391 aa26.84■■□□□ 1.89
CCS-201ENST00000310190 ILDR1Q86SU0 546 aaPredicted RBP26.84■■□□□ 1.89
CCS-201ENST00000310190 PLA2R1Q13018 1463 aa26.84■■□□□ 1.89
CCS-201ENST00000310190 CFAP65Q6ZU64 1925 aaKnown RBP26.83■■□□□ 1.89
CCS-201ENST00000310190 HSPA2P54652 639 aa26.81■■□□□ 1.88
CCS-201ENST00000310190 KDM5AP29375 1690 aaKnown RBP26.81■■□□□ 1.88
CCS-201ENST00000310190 STRCQ7RTU9 1775 aa26.8■■□□□ 1.88
CCS-201ENST00000310190 E9PCH4 1651 aa26.79■■□□□ 1.88
CCS-201ENST00000310190 SYNMO15061 1565 aa26.77■■□□□ 1.88
CCS-201ENST00000310190 UGGT1Q9NYU2 1555 aa26.75■■□□□ 1.87
CCS-201ENST00000310190 SLC52A1Q9NWF4 448 aa26.75■■□□□ 1.87
CCS-201ENST00000310190 SETD5Q9C0A6 1442 aa26.74■■□□□ 1.87
CCS-201ENST00000310190 HRCP23327 699 aa26.73■■□□□ 1.87
CCS-201ENST00000310190 THEMISQ8N1K5 641 aaPredicted RBP26.73■■□□□ 1.87
CCS-201ENST00000310190 DMRT2Q9Y5R5 561 aa26.72■■□□□ 1.87
CCS-201ENST00000310190 UBR1Q8IWV7 1749 aa26.72■■□□□ 1.87
CCS-201ENST00000310190 PTPRTO14522 1441 aa26.72■■□□□ 1.87
CCS-201ENST00000310190 PIK3C2BO00750 1634 aa26.72■■□□□ 1.87
CCS-201ENST00000310190 PKD2Q13563 968 aa26.7■■□□□ 1.86
CCS-201ENST00000310190 SLIT1O75093 1534 aa26.67■■□□□ 1.86
CCS-201ENST00000310190 IDI1Q13907 227 aa26.67■■□□□ 1.86
CCS-201ENST00000310190 ARHGAP23Q9P227 1491 aa26.67■■□□□ 1.86
CCS-201ENST00000310190 MED14O60244 1454 aa26.64■■□□□ 1.86
CCS-201ENST00000310190 SPHKAPQ2M3C7 1700 aa26.64■■□□□ 1.85
CCS-201ENST00000310190 POLR1AO95602 1720 aaPredicted RBP26.63■■□□□ 1.85
CCS-201ENST00000310190 ADGRB3O60242 1522 aa26.62■■□□□ 1.85
CCS-201ENST00000310190 RAB3GAP2Q9H2M9 1393 aa26.61■■□□□ 1.85
CCS-201ENST00000310190 NEURL4Q96JN8 1562 aa26.59■■□□□ 1.85
CCS-201ENST00000310190 ANKLE2Q86XL3 938 aa26.59■■□□□ 1.85
CCS-201ENST00000310190 TRIM52Q96A61 297 aa26.59■■□□□ 1.85
CCS-201ENST00000310190 TRPM2O94759 1503 aa26.59■■□□□ 1.85
CCS-201ENST00000310190 TMEM131LA2VDJ0 1609 aa26.58■■□□□ 1.85
CCS-201ENST00000310190 SLC4A1APQ9BWU0 796 aaKnown RBP26.57■■□□□ 1.84
CCS-201ENST00000310190 TMEM2Q9UHN6 1383 aa26.57■■□□□ 1.84
CCS-201ENST00000310190 NCKAP5LQ9HCH0 1330 aa26.55■■□□□ 1.84
CCS-201ENST00000310190 MPHOSPH9Q99550 1183 aa26.53■■□□□ 1.84
CCS-201ENST00000310190 SCAF11Q99590 1463 aaKnown RBP26.52■■□□□ 1.84
CCS-201ENST00000310190 ZFYVE9O95405 1425 aa26.49■■□□□ 1.83
CCS-201ENST00000310190 MYO5BQ9ULV0 1848 aa26.49■■□□□ 1.83
CCS-201ENST00000310190 STAG3Q9UJ98 1225 aa26.48■■□□□ 1.83
CCS-201ENST00000310190 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
CCS-201ENST00000310190 CLTCL1P53675 1640 aa26.47■■□□□ 1.83
CCS-201ENST00000310190 LTKP29376 864 aa26.47■■□□□ 1.83
CCS-201ENST00000310190 IQGAP1P46940 1657 aa26.47■■□□□ 1.83
CCS-201ENST00000310190 EID1Q9Y6B2 187 aa26.46■■□□□ 1.83
CCS-201ENST00000310190 HDGFP51858 240 aaKnown RBP26.43■■□□□ 1.82
CCS-201ENST00000310190 TXNDC2Q86VQ3 553 aa26.43■■□□□ 1.82
CCS-201ENST00000310190 KIF1BO60333 1816 aa26.43■■□□□ 1.82
CCS-201ENST00000310190 LTBP4Q8N2S1 1624 aa26.41■■□□□ 1.82
CCS-201ENST00000310190 RIMS2Q9UQ26 1411 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms