RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 PRDM15P57071 1507 aaPredicted RBP30.1■■■□□ 2.41
SCAMP3-201ENST00000302631 FAM135AQ9P2D6 1515 aa30.09■■■□□ 2.41
SCAMP3-201ENST00000302631 SETD5Q9C0A6 1442 aa30.09■■■□□ 2.41
SCAMP3-201ENST00000302631 UNC13BO14795 1591 aa30.09■■■□□ 2.41
SCAMP3-201ENST00000302631 GGT6Q6P531 493 aa30.08■■■□□ 2.41
SCAMP3-201ENST00000302631 MLECQ14165 292 aa30.07■■■□□ 2.4
SCAMP3-201ENST00000302631 VWDEQ8N2E2 1590 aa30.07■■■□□ 2.4
SCAMP3-201ENST00000302631 KDM5DQ9BY66 1539 aa30.06■■■□□ 2.4
SCAMP3-201ENST00000302631 FER1L4A9Z1Z3 1794 aa30.05■■■□□ 2.4
SCAMP3-201ENST00000302631 MADDQ8WXG6 1647 aa30.04■■■□□ 2.4
SCAMP3-201ENST00000302631 KDM4FA0A1W2PPD8 638 aa30.03■■■□□ 2.4
SCAMP3-201ENST00000302631 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.4
SCAMP3-201ENST00000302631 HRCP23327 699 aa30.01■■■□□ 2.39
SCAMP3-201ENST00000302631 CNTLNQ9NXG0 1405 aa30■■■□□ 2.39
SCAMP3-201ENST00000302631 MROH2AA6NES4 1674 aa29.99■■■□□ 2.39
SCAMP3-201ENST00000302631 RAB3GAP2Q9H2M9 1393 aa29.98■■■□□ 2.39
SCAMP3-201ENST00000302631 LMTK2Q8IWU2 1503 aa29.98■■■□□ 2.39
SCAMP3-201ENST00000302631 ABCC3O15438 1527 aa29.97■■■□□ 2.39
SCAMP3-201ENST00000302631 CLTCQ00610 1675 aaKnown RBP29.97■■■□□ 2.39
SCAMP3-201ENST00000302631 ACIN1Q9UKV3 1341 aaKnown RBP29.97■■■□□ 2.39
SCAMP3-201ENST00000302631 CEP152O94986 1710 aa29.96■■■□□ 2.39
SCAMP3-201ENST00000302631 IQGAP3Q86VI3 1631 aa29.96■■■□□ 2.39
SCAMP3-201ENST00000302631 RIMS1Q86UR5 1692 aaKnown RBP29.96■■■□□ 2.39
SCAMP3-201ENST00000302631 KANK1Q14678 1352 aa29.95■■■□□ 2.39
SCAMP3-201ENST00000302631 WASHC2CQ9Y4E1 1318 aa29.94■■■□□ 2.38
SCAMP3-201ENST00000302631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.94■■■□□ 2.38
SCAMP3-201ENST00000302631 NUP155O75694 1391 aa29.92■■■□□ 2.38
SCAMP3-201ENST00000302631 ESF1Q9H501 851 aaKnown RBP29.89■■■□□ 2.38
SCAMP3-201ENST00000302631 CAMSAP1Q5T5Y3 1602 aa29.89■■■□□ 2.38
SCAMP3-201ENST00000302631 ZMYM3Q14202 1370 aa29.88■■■□□ 2.37
SCAMP3-201ENST00000302631 TET3O43151 1660 aa29.88■■■□□ 2.37
SCAMP3-201ENST00000302631 C3P01024 1663 aa29.88■■■□□ 2.37
SCAMP3-201ENST00000302631 PTPRMP28827 1452 aa29.88■■■□□ 2.37
SCAMP3-201ENST00000302631 ARHGAP31Q2M1Z3 1444 aa29.88■■■□□ 2.37
SCAMP3-201ENST00000302631 PZPP20742 1482 aa29.85■■■□□ 2.37
SCAMP3-201ENST00000302631 PCGF6Q9BYE7 350 aa29.85■■■□□ 2.37
SCAMP3-201ENST00000302631 EFCAB6Q5THR3 1501 aa29.84■■■□□ 2.37
SCAMP3-201ENST00000302631 TRIM52Q96A61 297 aa29.82■■■□□ 2.36
SCAMP3-201ENST00000302631 NPATQ14207 1427 aa29.79■■■□□ 2.36
SCAMP3-201ENST00000302631 RPRD2Q5VT52 1461 aaKnown RBP29.78■■■□□ 2.36
SCAMP3-201ENST00000302631 E9PCH4 1651 aa29.78■■■□□ 2.36
SCAMP3-201ENST00000302631 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.35
SCAMP3-201ENST00000302631 CFAP65Q6ZU64 1925 aaKnown RBP29.74■■■□□ 2.35
SCAMP3-201ENST00000302631 SETD1BQ9UPS6 1966 aaKnown RBP29.74■■■□□ 2.35
SCAMP3-201ENST00000302631 MPHOSPH9Q99550 1183 aa29.73■■■□□ 2.35
SCAMP3-201ENST00000302631 SPATA31D1Q6ZQQ2 1576 aa29.73■■■□□ 2.35
SCAMP3-201ENST00000302631 SLC4A1APQ9BWU0 796 aaKnown RBP29.72■■■□□ 2.35
SCAMP3-201ENST00000302631 PREX1Q8TCU6 1659 aa29.72■■■□□ 2.35
SCAMP3-201ENST00000302631 ERVK-7P63135 1459 aa29.7■■■□□ 2.34
SCAMP3-201ENST00000302631 NOS1P29475 1434 aa29.69■■■□□ 2.34
SCAMP3-201ENST00000302631 FBXO31Q5XUX0 539 aaPredicted RBP29.69■■■□□ 2.34
SCAMP3-201ENST00000302631 PKD2Q13563 968 aa29.67■■■□□ 2.34
SCAMP3-201ENST00000302631 PTPRTO14522 1441 aa29.64■■■□□ 2.34
SCAMP3-201ENST00000302631 SPHKAPQ2M3C7 1700 aa29.62■■■□□ 2.33
SCAMP3-201ENST00000302631 SYNMO15061 1565 aa29.62■■■□□ 2.33
SCAMP3-201ENST00000302631 TNRQ92752 1358 aa29.61■■■□□ 2.33
SCAMP3-201ENST00000302631 PLPPR3Q6T4P5 718 aa29.6■■■□□ 2.33
SCAMP3-201ENST00000302631 PLA2R1Q13018 1463 aa29.59■■■□□ 2.33
SCAMP3-201ENST00000302631 PIK3C2BO00750 1634 aa29.56■■■□□ 2.32
SCAMP3-201ENST00000302631 TRPM2O94759 1503 aa29.56■■■□□ 2.32
SCAMP3-201ENST00000302631 MYO3AQ8NEV4 1616 aa29.56■■■□□ 2.32
SCAMP3-201ENST00000302631 DHX57Q6P158 1386 aaKnown RBP29.54■■■□□ 2.32
SCAMP3-201ENST00000302631 NLRP1Q9C000 1473 aa29.54■■■□□ 2.32
SCAMP3-201ENST00000302631 FOXD1Q16676 465 aa29.54■■■□□ 2.32
SCAMP3-201ENST00000302631 SLC52A1Q9NWF4 448 aa29.53■■■□□ 2.32
SCAMP3-201ENST00000302631 ZNF142P52746 1687 aaPredicted RBP29.52■■■□□ 2.32
SCAMP3-201ENST00000302631 ANKRD30BQ9BXX2 1392 aa29.5■■■□□ 2.31
SCAMP3-201ENST00000302631 UHRF1BP1Q6BDS2 1440 aa29.48■■■□□ 2.31
SCAMP3-201ENST00000302631 A2ML1A8K2U0 1454 aa29.48■■■□□ 2.31
SCAMP3-201ENST00000302631 IDI1Q13907 227 aa29.48■■■□□ 2.31
SCAMP3-201ENST00000302631 KDM5AP29375 1690 aaKnown RBP29.47■■■□□ 2.31
SCAMP3-201ENST00000302631 UGGT1Q9NYU2 1555 aa29.47■■■□□ 2.31
SCAMP3-201ENST00000302631 CEP170BQ9Y4F5 1589 aaPredicted RBP29.47■■■□□ 2.31
SCAMP3-201ENST00000302631 CLTCL1P53675 1640 aa29.46■■■□□ 2.31
SCAMP3-201ENST00000302631 LMTK3Q96Q04 1460 aa29.44■■■□□ 2.3
SCAMP3-201ENST00000302631 UBR1Q8IWV7 1749 aa29.42■■■□□ 2.3
SCAMP3-201ENST00000302631 AEBP2Q6ZN18 517 aaPredicted RBP29.41■■■□□ 2.3
SCAMP3-201ENST00000302631 TMEM131LA2VDJ0 1609 aa29.4■■■□□ 2.3
SCAMP3-201ENST00000302631 CCDC144AA2RUR9 1427 aa29.39■■■□□ 2.3
SCAMP3-201ENST00000302631 KIF1BO60333 1816 aa29.39■■■□□ 2.29
SCAMP3-201ENST00000302631 ADGRB3O60242 1522 aa29.38■■■□□ 2.29
SCAMP3-201ENST00000302631 MYO5BQ9ULV0 1848 aa29.37■■■□□ 2.29
SCAMP3-201ENST00000302631 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
SCAMP3-201ENST00000302631 THEMISQ8N1K5 641 aaPredicted RBP29.31■■■□□ 2.28
SCAMP3-201ENST00000302631 SPATA31E1Q6ZUB1 1445 aa29.3■■■□□ 2.28
SCAMP3-201ENST00000302631 ARHGAP23Q9P227 1491 aa29.29■■■□□ 2.28
SCAMP3-201ENST00000302631 SLIT1O75093 1534 aa29.29■■■□□ 2.28
SCAMP3-201ENST00000302631 CLSPNQ9HAW4 1339 aa29.26■■■□□ 2.28
SCAMP3-201ENST00000302631 STAG3Q9UJ98 1225 aa29.26■■■□□ 2.27
SCAMP3-201ENST00000302631 TMEM2Q9UHN6 1383 aa29.25■■■□□ 2.27
SCAMP3-201ENST00000302631 CHGAP10645 457 aaKnown RBP29.22■■■□□ 2.27
SCAMP3-201ENST00000302631 HSPA2P54652 639 aa29.22■■■□□ 2.27
SCAMP3-201ENST00000302631 ZFYVE9O95405 1425 aa29.22■■■□□ 2.27
SCAMP3-201ENST00000302631 SIN3AQ96ST3 1273 aa29.2■■■□□ 2.26
SCAMP3-201ENST00000302631 STRCQ7RTU9 1775 aa29.18■■■□□ 2.26
SCAMP3-201ENST00000302631 RPGRIP1LQ68CZ1 1315 aa29.18■■■□□ 2.26
SCAMP3-201ENST00000302631 NEXMIFQ5QGS0 1516 aa29.17■■■□□ 2.26
SCAMP3-201ENST00000302631 IFT172Q9UG01 1749 aa29.17■■■□□ 2.26
SCAMP3-201ENST00000302631 PPLO60437 1756 aa29.17■■■□□ 2.26
SCAMP3-201ENST00000302631 POLR1AO95602 1720 aaPredicted RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms