RNA–Protein interactions for RNA: ENST00000301810.11

ACAA1-201, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene ACAA1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-201ENST00000301810 KIF3BO15066 747 aa28.42■■■□□ 2.14
ACAA1-201ENST00000301810 TRIM52Q96A61 297 aa28.42■■■□□ 2.14
ACAA1-201ENST00000301810 MROH1Q8NDA8 1641 aa28.42■■■□□ 2.14
ACAA1-201ENST00000301810 ACIN1Q9UKV3 1341 aaKnown RBP28.42■■■□□ 2.14
ACAA1-201ENST00000301810 KDM5DQ9BY66 1539 aa28.41■■■□□ 2.14
ACAA1-201ENST00000301810 PRDM15P57071 1507 aaPredicted RBP28.4■■■□□ 2.14
ACAA1-201ENST00000301810 IQGAP3Q86VI3 1631 aa28.38■■■□□ 2.13
ACAA1-201ENST00000301810 NUP155O75694 1391 aa28.36■■■□□ 2.13
ACAA1-201ENST00000301810 PZPP20742 1482 aa28.35■■■□□ 2.13
ACAA1-201ENST00000301810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.35■■■□□ 2.135e-10■■□□□ 12.3
ACAA1-201ENST00000301810 DHX57Q6P158 1386 aaKnown RBP28.34■■■□□ 2.13
ACAA1-201ENST00000301810 FAM135AQ9P2D6 1515 aa28.34■■■□□ 2.13
ACAA1-201ENST00000301810 VWDEQ8N2E2 1590 aa28.32■■■□□ 2.12
ACAA1-201ENST00000301810 CEP152O94986 1710 aa28.32■■■□□ 2.12
ACAA1-201ENST00000301810 KANK1Q14678 1352 aa28.3■■■□□ 2.12
ACAA1-201ENST00000301810 GGT6Q6P531 493 aa28.29■■■□□ 2.12
ACAA1-201ENST00000301810 ZC3H13Q5T200 1668 aaKnown RBP28.28■■■□□ 2.12
ACAA1-201ENST00000301810 TET3O43151 1660 aa28.26■■■□□ 2.11
ACAA1-201ENST00000301810 ARID4BQ4LE39 1312 aaPredicted RBP28.26■■■□□ 2.11
ACAA1-201ENST00000301810 MPHOSPH9Q99550 1183 aa28.26■■■□□ 2.11
ACAA1-201ENST00000301810 CCER1Q8TC90 406 aaPredicted RBP28.25■■■□□ 2.11
ACAA1-201ENST00000301810 SLC4A1APQ9BWU0 796 aaKnown RBP28.25■■■□□ 2.11
ACAA1-201ENST00000301810 ABCC3O15438 1527 aa28.23■■■□□ 2.11
ACAA1-201ENST00000301810 LMTK2Q8IWU2 1503 aa28.22■■■□□ 2.11
ACAA1-201ENST00000301810 MLECQ14165 292 aa28.21■■■□□ 2.11
ACAA1-201ENST00000301810 CAMSAP1Q5T5Y3 1602 aa28.21■■■□□ 2.11
ACAA1-201ENST00000301810 E9PCH4 1651 aa28.2■■■□□ 2.1
ACAA1-201ENST00000301810 CLTCQ00610 1675 aaKnown RBP28.2■■■□□ 2.1
ACAA1-201ENST00000301810 EFCAB6Q5THR3 1501 aa28.19■■■□□ 2.1
ACAA1-201ENST00000301810 WASHC2CQ9Y4E1 1318 aa28.17■■■□□ 2.1
ACAA1-201ENST00000301810 PKD2Q13563 968 aa28.16■■■□□ 2.1
ACAA1-201ENST00000301810 FER1L4A9Z1Z3 1794 aa28.15■■■□□ 2.1
ACAA1-201ENST00000301810 FOXD1Q16676 465 aa28.13■■■□□ 2.09
ACAA1-201ENST00000301810 PPP6R1Q9UPN7 881 aa28.13■■■□□ 2.09
ACAA1-201ENST00000301810 SPHKAPQ2M3C7 1700 aa28.09■■■□□ 2.09
ACAA1-201ENST00000301810 MROH2AA6NES4 1674 aa28.08■■■□□ 2.09
ACAA1-201ENST00000301810 CLSPNQ9HAW4 1339 aa28.08■■■□□ 2.09
ACAA1-201ENST00000301810 CFAP65Q6ZU64 1925 aaKnown RBP28.08■■■□□ 2.08
ACAA1-201ENST00000301810 RPRD2Q5VT52 1461 aaKnown RBP28.06■■■□□ 2.08
ACAA1-201ENST00000301810 ESF1Q9H501 851 aaKnown RBP28.06■■■□□ 2.08
ACAA1-201ENST00000301810 MADDQ8WXG6 1647 aa28.06■■■□□ 2.08
ACAA1-201ENST00000301810 ADAMTSL3P82987 1691 aa28.05■■■□□ 2.08
ACAA1-201ENST00000301810 NPATQ14207 1427 aa28.05■■■□□ 2.08
ACAA1-201ENST00000301810 ARHGAP31Q2M1Z3 1444 aa28.04■■■□□ 2.08
ACAA1-201ENST00000301810 CNTLNQ9NXG0 1405 aa28.04■■■□□ 2.08
ACAA1-201ENST00000301810 ANKRD30BQ9BXX2 1392 aa28.03■■■□□ 2.08
ACAA1-201ENST00000301810 RIMS1Q86UR5 1692 aaKnown RBP28.01■■■□□ 2.08
ACAA1-201ENST00000301810 PREX1Q8TCU6 1659 aa28.01■■■□□ 2.08
ACAA1-201ENST00000301810 TRPM2O94759 1503 aa28■■■□□ 2.07
ACAA1-201ENST00000301810 C3P01024 1663 aa27.98■■■□□ 2.07
ACAA1-201ENST00000301810 PLA2R1Q13018 1463 aa27.98■■■□□ 2.07
ACAA1-201ENST00000301810 PTPRTO14522 1441 aa27.97■■■□□ 2.07
ACAA1-201ENST00000301810 ZMYM3Q14202 1370 aa27.95■■■□□ 2.06
ACAA1-201ENST00000301810 SIN3AQ96ST3 1273 aa27.93■■■□□ 2.06
ACAA1-201ENST00000301810 CLTCL1P53675 1640 aa27.93■■■□□ 2.06
ACAA1-201ENST00000301810 SYNMO15061 1565 aa27.93■■■□□ 2.06
ACAA1-201ENST00000301810 ERVK-7P63135 1459 aa27.93■■■□□ 2.06
ACAA1-201ENST00000301810 CCDC144AA2RUR9 1427 aa27.92■■■□□ 2.06
ACAA1-201ENST00000301810 NOS1P29475 1434 aa27.92■■■□□ 2.06
ACAA1-201ENST00000301810 SPATA31D1Q6ZQQ2 1576 aa27.91■■■□□ 2.06
ACAA1-201ENST00000301810 UGGT1Q9NYU2 1555 aa27.9■■■□□ 2.06
ACAA1-201ENST00000301810 NEUROD1Q13562 356 aa27.89■■■□□ 2.06
ACAA1-201ENST00000301810 PIK3C2BO00750 1634 aa27.87■■■□□ 2.05
ACAA1-201ENST00000301810 FBXO31Q5XUX0 539 aaPredicted RBP27.87■■■□□ 2.05
ACAA1-201ENST00000301810 KIF1BO60333 1816 aa27.85■■■□□ 2.05
ACAA1-201ENST00000301810 CEBPAP49715 358 aaPredicted RBP27.82■■■□□ 2.04
ACAA1-201ENST00000301810 PLPPR3Q6T4P5 718 aa27.79■■■□□ 2.04
ACAA1-201ENST00000301810 PTPRMP28827 1452 aa27.77■■■□□ 2.04
ACAA1-201ENST00000301810 TONSLQ96HA7 1378 aa27.77■■■□□ 2.04
ACAA1-201ENST00000301810 TNRQ92752 1358 aa27.76■■■□□ 2.03
ACAA1-201ENST00000301810 ZEB1P37275 1124 aaPredicted RBP27.75■■■□□ 2.03
ACAA1-201ENST00000301810 MYO5BQ9ULV0 1848 aa27.74■■■□□ 2.03
ACAA1-201ENST00000301810 ADGRB3O60242 1522 aa27.74■■■□□ 2.03
ACAA1-201ENST00000301810 SLC52A1Q9NWF4 448 aa27.73■■■□□ 2.03
ACAA1-201ENST00000301810 NEURL4Q96JN8 1562 aa27.73■■■□□ 2.03
ACAA1-201ENST00000301810 SPATA31E1Q6ZUB1 1445 aa27.72■■■□□ 2.03
ACAA1-201ENST00000301810 MYO3AQ8NEV4 1616 aa27.72■■■□□ 2.03
ACAA1-201ENST00000301810 TMEM131LA2VDJ0 1609 aa27.7■■■□□ 2.03
ACAA1-201ENST00000301810 IDI1Q13907 227 aa27.7■■■□□ 2.02
ACAA1-201ENST00000301810 KDM4FA0A1W2PPD8 638 aa27.68■■■□□ 2.02
ACAA1-201ENST00000301810 TIMELESSQ9UNS1 1208 aa27.68■■■□□ 2.02
ACAA1-201ENST00000301810 NLRP1Q9C000 1473 aa27.67■■■□□ 2.02
ACAA1-201ENST00000301810 KDM5AP29375 1690 aaKnown RBP27.66■■■□□ 2.02
ACAA1-201ENST00000301810 CHGAP10645 457 aaKnown RBP27.66■■■□□ 2.02
ACAA1-201ENST00000301810 RGL3Q3MIN7 710 aa27.65■■■□□ 2.02
ACAA1-201ENST00000301810 UBR1Q8IWV7 1749 aa27.65■■■□□ 2.02
ACAA1-201ENST00000301810 IFT172Q9UG01 1749 aa27.65■■■□□ 2.02
ACAA1-201ENST00000301810 SETD1BQ9UPS6 1966 aaKnown RBP27.65■■■□□ 2.02
ACAA1-201ENST00000301810 L3MBTL2Q969R5 705 aa27.64■■■□□ 2.02
ACAA1-201ENST00000301810 ZNF142P52746 1687 aaPredicted RBP27.62■■■□□ 2.01
ACAA1-201ENST00000301810 PPLO60437 1756 aa27.61■■■□□ 2.01
ACAA1-201ENST00000301810 CEP170BQ9Y4F5 1589 aaPredicted RBP27.6■■■□□ 2.01
ACAA1-201ENST00000301810 STAG3Q9UJ98 1225 aa27.59■■■□□ 2.01
ACAA1-201ENST00000301810 A2ML1A8K2U0 1454 aa27.59■■■□□ 2.01
ACAA1-201ENST00000301810 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
ACAA1-201ENST00000301810 NEXMIFQ5QGS0 1516 aa27.56■■■□□ 2
ACAA1-201ENST00000301810 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
ACAA1-201ENST00000301810 PPP1R15AO75807 674 aaPredicted RBP27.51■■■□□ 2
ACAA1-201ENST00000301810 KDM2AQ9Y2K7 1162 aa27.51■■■□□ 2
ACAA1-201ENST00000301810 UHRF1BP1Q6BDS2 1440 aa27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms