RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 LMTK3Q96Q04 1460 aa27.92■■■□□ 2.06
SPSB3-201ENST00000301717 ADGRL2O95490 1459 aa27.91■■■□□ 2.06
SPSB3-201ENST00000301717 RRBP1Q9P2E9 1410 aaKnown RBP27.89■■■□□ 2.06
SPSB3-201ENST00000301717 HSPA2P54652 639 aa27.88■■■□□ 2.05
SPSB3-201ENST00000301717 MROH1Q8NDA8 1641 aa27.88■■■□□ 2.05
SPSB3-201ENST00000301717 ERBINQ96RT1 1412 aa27.88■■■□□ 2.05
SPSB3-201ENST00000301717 RNF17Q9BXT8 1623 aaKnown RBP27.87■■■□□ 2.05
SPSB3-201ENST00000301717 EIF2AK4Q9P2K8 1649 aaKnown RBP27.87■■■□□ 2.05
SPSB3-201ENST00000301717 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
SPSB3-201ENST00000301717 MROH2AA6NES4 1674 aa27.87■■■□□ 2.05
SPSB3-201ENST00000301717 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
SPSB3-201ENST00000301717 KDM5DQ9BY66 1539 aa27.86■■■□□ 2.05
SPSB3-201ENST00000301717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.84■■■□□ 2.052e-6■■□□□ 13.2
SPSB3-201ENST00000301717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.84■■■□□ 2.051e-6■■■□□ 17.1
SPSB3-201ENST00000301717 ABCC3O15438 1527 aa27.81■■■□□ 2.04
SPSB3-201ENST00000301717 FBXO31Q5XUX0 539 aaPredicted RBP27.81■■■□□ 2.04
SPSB3-201ENST00000301717 PREX1Q8TCU6 1659 aa27.78■■■□□ 2.04
SPSB3-201ENST00000301717 UHRF1BP1Q6BDS2 1440 aa27.78■■■□□ 2.04
SPSB3-201ENST00000301717 ANKRD50Q9ULJ7 1429 aa27.78■■■□□ 2.04
SPSB3-201ENST00000301717 ROCK1Q13464 1354 aa27.76■■■□□ 2.03
SPSB3-201ENST00000301717 PRDM15P57071 1507 aaPredicted RBP27.76■■■□□ 2.03
SPSB3-201ENST00000301717 NPATQ14207 1427 aa27.76■■■□□ 2.03
SPSB3-201ENST00000301717 FAM135AQ9P2D6 1515 aa27.75■■■□□ 2.03
SPSB3-201ENST00000301717 CEP152O94986 1710 aa27.74■■■□□ 2.03
SPSB3-201ENST00000301717 DEPDC5O75140 1603 aa27.73■■■□□ 2.03
SPSB3-201ENST00000301717 PZPP20742 1482 aa27.73■■■□□ 2.03
SPSB3-201ENST00000301717 ZC3H13Q5T200 1668 aaKnown RBP27.69■■■□□ 2.02
SPSB3-201ENST00000301717 SETD1BQ9UPS6 1966 aaKnown RBP27.69■■■□□ 2.02
SPSB3-201ENST00000301717 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
SPSB3-201ENST00000301717 TNRQ92752 1358 aa27.67■■■□□ 2.02
SPSB3-201ENST00000301717 MYO3AQ8NEV4 1616 aa27.67■■■□□ 2.02
SPSB3-201ENST00000301717 KANK1Q14678 1352 aa27.66■■■□□ 2.02
SPSB3-201ENST00000301717 VWDEQ8N2E2 1590 aa27.65■■■□□ 2.02
SPSB3-201ENST00000301717 ERVK-7P63135 1459 aa27.62■■■□□ 2.01
SPSB3-201ENST00000301717 CEP170BQ9Y4F5 1589 aaPredicted RBP27.6■■■□□ 2.01
SPSB3-201ENST00000301717 LMTK2Q8IWU2 1503 aa27.59■■■□□ 2.01
SPSB3-201ENST00000301717 NAIPQ13075 1403 aa27.59■■■□□ 2.01
SPSB3-201ENST00000301717 UNC13BO14795 1591 aa27.57■■■□□ 2
SPSB3-201ENST00000301717 SPATA31D1Q6ZQQ2 1576 aa27.57■■■□□ 2
SPSB3-201ENST00000301717 ARHGAP31Q2M1Z3 1444 aa27.56■■■□□ 2
SPSB3-201ENST00000301717 CFAP65Q6ZU64 1925 aaKnown RBP27.56■■■□□ 2
SPSB3-201ENST00000301717 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
SPSB3-201ENST00000301717 A2ML1A8K2U0 1454 aa27.55■■■□□ 2
SPSB3-201ENST00000301717 EFCAB6Q5THR3 1501 aa27.54■■■□□ 2
SPSB3-201ENST00000301717 STRCQ7RTU9 1775 aa27.52■■■□□ 2
SPSB3-201ENST00000301717 NUP155O75694 1391 aa27.52■■■□□ 2
SPSB3-201ENST00000301717 HFM1A2PYH4 1435 aa27.51■■□□□ 1.99
SPSB3-201ENST00000301717 GCC2Q8IWJ2 1684 aa27.49■■□□□ 1.99
SPSB3-201ENST00000301717 NCKAP5LQ9HCH0 1330 aa27.49■■□□□ 1.99
SPSB3-201ENST00000301717 NLRP1Q9C000 1473 aa27.49■■□□□ 1.99
SPSB3-201ENST00000301717 TET3O43151 1660 aa27.46■■□□□ 1.99
SPSB3-201ENST00000301717 IQGAP3Q86VI3 1631 aa27.46■■□□□ 1.99
SPSB3-201ENST00000301717 UGGT1Q9NYU2 1555 aa27.44■■□□□ 1.98
SPSB3-201ENST00000301717 SYNMO15061 1565 aa27.44■■□□□ 1.98
SPSB3-201ENST00000301717 NOS1P29475 1434 aa27.43■■□□□ 1.98
SPSB3-201ENST00000301717 PLA2R1Q13018 1463 aa27.4■■□□□ 1.98
SPSB3-201ENST00000301717 E9PCH4 1651 aa27.39■■□□□ 1.98
SPSB3-201ENST00000301717 IDI1Q13907 227 aa27.39■■□□□ 1.97
SPSB3-201ENST00000301717 TRIM52Q96A61 297 aa27.39■■□□□ 1.97
SPSB3-201ENST00000301717 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
SPSB3-201ENST00000301717 THEMISQ8N1K5 641 aaPredicted RBP27.38■■□□□ 1.97
SPSB3-201ENST00000301717 PIK3C2BO00750 1634 aa27.36■■□□□ 1.97
SPSB3-201ENST00000301717 UBR1Q8IWV7 1749 aa27.35■■□□□ 1.97
SPSB3-201ENST00000301717 DMRT2Q9Y5R5 561 aa27.34■■□□□ 1.97
SPSB3-201ENST00000301717 PKD2Q13563 968 aa27.33■■□□□ 1.97
SPSB3-201ENST00000301717 PTPRTO14522 1441 aa27.33■■□□□ 1.97
SPSB3-201ENST00000301717 STAG3Q9UJ98 1225 aa27.31■■□□□ 1.96
SPSB3-201ENST00000301717 NEURL4Q96JN8 1562 aa27.31■■□□□ 1.96
SPSB3-201ENST00000301717 ANKLE2Q86XL3 938 aa27.29■■□□□ 1.96
SPSB3-201ENST00000301717 SLC52A1Q9NWF4 448 aa27.27■■□□□ 1.96
SPSB3-201ENST00000301717 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
SPSB3-201ENST00000301717 LTKP29376 864 aa27.26■■□□□ 1.95
SPSB3-201ENST00000301717 SLC4A1APQ9BWU0 796 aaKnown RBP27.25■■□□□ 1.95
SPSB3-201ENST00000301717 POLR1AO95602 1720 aaPredicted RBP27.25■■□□□ 1.95
SPSB3-201ENST00000301717 ADGRB3O60242 1522 aa27.24■■□□□ 1.95
SPSB3-201ENST00000301717 CHGAP10645 457 aaKnown RBP27.24■■□□□ 1.95
SPSB3-201ENST00000301717 ARHGAP23Q9P227 1491 aa27.23■■□□□ 1.95
SPSB3-201ENST00000301717 FOXD1Q16676 465 aa27.23■■□□□ 1.95
SPSB3-201ENST00000301717 RAB3GAP2Q9H2M9 1393 aa27.22■■□□□ 1.95
SPSB3-201ENST00000301717 TMEM2Q9UHN6 1383 aa27.22■■□□□ 1.95
SPSB3-201ENST00000301717 ZNF335Q9H4Z2 1342 aaPredicted RBP27.22■■□□□ 1.95
SPSB3-201ENST00000301717 SLIT1O75093 1534 aa27.21■■□□□ 1.95
SPSB3-201ENST00000301717 NPHP4O75161 1426 aaPredicted RBP27.21■■□□□ 1.95
SPSB3-201ENST00000301717 TXNDC2Q86VQ3 553 aa27.21■■□□□ 1.95
SPSB3-201ENST00000301717 SCAF11Q99590 1463 aaKnown RBP27.19■■□□□ 1.94
SPSB3-201ENST00000301717 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
SPSB3-201ENST00000301717 SPHKAPQ2M3C7 1700 aa27.18■■□□□ 1.94
SPSB3-201ENST00000301717 MED14O60244 1454 aa27.18■■□□□ 1.94
SPSB3-201ENST00000301717 TMEM131LA2VDJ0 1609 aa27.17■■□□□ 1.94
SPSB3-201ENST00000301717 MPHOSPH9Q99550 1183 aa27.16■■□□□ 1.94
SPSB3-201ENST00000301717 MYO5BQ9ULV0 1848 aa27.15■■□□□ 1.94
SPSB3-201ENST00000301717 KDM5AP29375 1690 aaKnown RBP27.15■■□□□ 1.94
SPSB3-201ENST00000301717 LTBP4Q8N2S1 1624 aa27.14■■□□□ 1.94
SPSB3-201ENST00000301717 EID1Q9Y6B2 187 aa27.14■■□□□ 1.93
SPSB3-201ENST00000301717 NUTM2DQ5VT03 806 aaPredicted RBP27.13■■□□□ 1.93
SPSB3-201ENST00000301717 CERKQ8TCT0 537 aa27.13■■□□□ 1.93
SPSB3-201ENST00000301717 IQGAP1P46940 1657 aa27.13■■□□□ 1.93
SPSB3-201ENST00000301717 CLTCL1P53675 1640 aa27.13■■□□□ 1.93
SPSB3-201ENST00000301717 TRPM2O94759 1503 aa27.12■■□□□ 1.93
SPSB3-201ENST00000301717 RIMS2Q9UQ26 1411 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms