RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 REREQ9P2R6 1566 aa22.47■■□□□ 1.19
CCDC140-201ENST00000295226 NUP155O75694 1391 aa22.46■■□□□ 1.19
CCDC140-201ENST00000295226 EIF2AK4Q9P2K8 1649 aaKnown RBP22.46■■□□□ 1.19
CCDC140-201ENST00000295226 AGLP35573 1532 aa22.44■■□□□ 1.18
CCDC140-201ENST00000295226 MROH1Q8NDA8 1641 aa22.42■■□□□ 1.18
CCDC140-201ENST00000295226 UNC13BO14795 1591 aa22.41■■□□□ 1.18
CCDC140-201ENST00000295226 BCORL1Q5H9F3 1711 aa22.41■■□□□ 1.18
CCDC140-201ENST00000295226 RNF17Q9BXT8 1623 aaKnown RBP22.4■■□□□ 1.18
CCDC140-201ENST00000295226 DEPDC5O75140 1603 aa22.4■■□□□ 1.18
CCDC140-201ENST00000295226 MPHOSPH9Q99550 1183 aa22.39■■□□□ 1.17
CCDC140-201ENST00000295226 SLC4A1APQ9BWU0 796 aaKnown RBP22.39■■□□□ 1.17
CCDC140-201ENST00000295226 PZPP20742 1482 aa22.38■■□□□ 1.17
CCDC140-201ENST00000295226 FOXD1Q16676 465 aa22.37■■□□□ 1.17
CCDC140-201ENST00000295226 WASHC2CQ9Y4E1 1318 aa22.37■■□□□ 1.17
CCDC140-201ENST00000295226 KANK1Q14678 1352 aa22.36■■□□□ 1.17
CCDC140-201ENST00000295226 PRDM15P57071 1507 aaPredicted RBP22.36■■□□□ 1.17
CCDC140-201ENST00000295226 FAM135AQ9P2D6 1515 aa22.35■■□□□ 1.17
CCDC140-201ENST00000295226 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
CCDC140-201ENST00000295226 KDM5DQ9BY66 1539 aa22.33■■□□□ 1.17
CCDC140-201ENST00000295226 CEP152O94986 1710 aa22.33■■□□□ 1.17
CCDC140-201ENST00000295226 PKD2Q13563 968 aa22.33■■□□□ 1.16
CCDC140-201ENST00000295226 VWDEQ8N2E2 1590 aa22.33■■□□□ 1.16
CCDC140-201ENST00000295226 IQGAP3Q86VI3 1631 aa22.33■■□□□ 1.16
CCDC140-201ENST00000295226 ACIN1Q9UKV3 1341 aaKnown RBP22.32■■□□□ 1.16
CCDC140-201ENST00000295226 ABCC3O15438 1527 aa22.3■■□□□ 1.16
CCDC140-201ENST00000295226 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
CCDC140-201ENST00000295226 ESF1Q9H501 851 aaKnown RBP22.29■■□□□ 1.16
CCDC140-201ENST00000295226 CLTCQ00610 1675 aaKnown RBP22.27■■□□□ 1.16
CCDC140-201ENST00000295226 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
CCDC140-201ENST00000295226 CFAP65Q6ZU64 1925 aaKnown RBP22.25■■□□□ 1.15
CCDC140-201ENST00000295226 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
CCDC140-201ENST00000295226 LMTK2Q8IWU2 1503 aa22.24■■□□□ 1.15
CCDC140-201ENST00000295226 TET3O43151 1660 aa22.24■■□□□ 1.15
CCDC140-201ENST00000295226 E9PCH4 1651 aa22.23■■□□□ 1.15
CCDC140-201ENST00000295226 CAMSAP1Q5T5Y3 1602 aa22.22■■□□□ 1.15
CCDC140-201ENST00000295226 CEBPAP49715 358 aaPredicted RBP22.22■■□□□ 1.15
CCDC140-201ENST00000295226 FER1L4A9Z1Z3 1794 aa22.22■■□□□ 1.15
CCDC140-201ENST00000295226 ZMYM3Q14202 1370 aa22.21■■□□□ 1.15
CCDC140-201ENST00000295226 FBXO31Q5XUX0 539 aaPredicted RBP22.21■■□□□ 1.15
CCDC140-201ENST00000295226 MADDQ8WXG6 1647 aa22.21■■□□□ 1.15
CCDC140-201ENST00000295226 ZC3H13Q5T200 1668 aaKnown RBP22.21■■□□□ 1.15
CCDC140-201ENST00000295226 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.15
CCDC140-201ENST00000295226 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.14
CCDC140-201ENST00000295226 NPATQ14207 1427 aa22.2■■□□□ 1.14
CCDC140-201ENST00000295226 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
CCDC140-201ENST00000295226 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
CCDC140-201ENST00000295226 CNTLNQ9NXG0 1405 aa22.16■■□□□ 1.14
CCDC140-201ENST00000295226 ANKRD30BQ9BXX2 1392 aa22.16■■□□□ 1.14
CCDC140-201ENST00000295226 KDM4FA0A1W2PPD8 638 aa22.15■■□□□ 1.14
CCDC140-201ENST00000295226 PLA2R1Q13018 1463 aa22.15■■□□□ 1.14
CCDC140-201ENST00000295226 ARHGAP31Q2M1Z3 1444 aa22.14■■□□□ 1.14
CCDC140-201ENST00000295226 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
CCDC140-201ENST00000295226 C3P01024 1663 aa22.11■■□□□ 1.13
CCDC140-201ENST00000295226 RPRD2Q5VT52 1461 aaKnown RBP22.11■■□□□ 1.13
CCDC140-201ENST00000295226 MROH2AA6NES4 1674 aa22.1■■□□□ 1.13
CCDC140-201ENST00000295226 PTPRTO14522 1441 aa22.09■■□□□ 1.13
CCDC140-201ENST00000295226 SPHKAPQ2M3C7 1700 aa22.08■■□□□ 1.13
CCDC140-201ENST00000295226 ERVK-7P63135 1459 aa22.08■■□□□ 1.13
CCDC140-201ENST00000295226 PREX1Q8TCU6 1659 aa22.08■■□□□ 1.13
CCDC140-201ENST00000295226 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.12
CCDC140-201ENST00000295226 NOS1P29475 1434 aa22.07■■□□□ 1.12
CCDC140-201ENST00000295226 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
CCDC140-201ENST00000295226 PTPRMP28827 1452 aa22.06■■□□□ 1.12
CCDC140-201ENST00000295226 SYNMO15061 1565 aa22.05■■□□□ 1.12
CCDC140-201ENST00000295226 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
CCDC140-201ENST00000295226 CCDC144AA2RUR9 1427 aa22.03■■□□□ 1.12
CCDC140-201ENST00000295226 TRPM2O94759 1503 aa22.03■■□□□ 1.12
CCDC140-201ENST00000295226 IDI1Q13907 227 aa22.03■■□□□ 1.12
CCDC140-201ENST00000295226 SPATA31D1Q6ZQQ2 1576 aa22.02■■□□□ 1.12
CCDC140-201ENST00000295226 CLTCL1P53675 1640 aa22.02■■□□□ 1.12
CCDC140-201ENST00000295226 TNRQ92752 1358 aa22.02■■□□□ 1.11
CCDC140-201ENST00000295226 CHGAP10645 457 aaKnown RBP22.01■■□□□ 1.11
CCDC140-201ENST00000295226 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
CCDC140-201ENST00000295226 SLC52A1Q9NWF4 448 aa21.97■■□□□ 1.11
CCDC140-201ENST00000295226 PIK3C2BO00750 1634 aa21.95■■□□□ 1.1
CCDC140-201ENST00000295226 STAG3Q9UJ98 1225 aa21.92■■□□□ 1.1
CCDC140-201ENST00000295226 KIF1BO60333 1816 aa21.9■■□□□ 1.1
CCDC140-201ENST00000295226 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
CCDC140-201ENST00000295226 SPATA31E1Q6ZUB1 1445 aa21.9■■□□□ 1.1
CCDC140-201ENST00000295226 ZNF326Q5BKZ1 582 aaKnown RBP21.89■■□□□ 1.1
CCDC140-201ENST00000295226 MYO5BQ9ULV0 1848 aa21.89■■□□□ 1.09
CCDC140-201ENST00000295226 TONSLQ96HA7 1378 aa21.89■■□□□ 1.09
CCDC140-201ENST00000295226 SETD1BQ9UPS6 1966 aaKnown RBP21.89■■□□□ 1.09
CCDC140-201ENST00000295226 MYO3AQ8NEV4 1616 aa21.87■■□□□ 1.09
CCDC140-201ENST00000295226 KDM2AQ9Y2K7 1162 aa21.87■■□□□ 1.09
CCDC140-201ENST00000295226 TMEM131LA2VDJ0 1609 aa21.87■■□□□ 1.09
CCDC140-201ENST00000295226 NLRP1Q9C000 1473 aa21.86■■□□□ 1.09
CCDC140-201ENST00000295226 NUTM2DQ5VT03 806 aaPredicted RBP21.86■■□□□ 1.09
CCDC140-201ENST00000295226 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
CCDC140-201ENST00000295226 ADGRB3O60242 1522 aa21.85■■□□□ 1.09
CCDC140-201ENST00000295226 A2ML1A8K2U0 1454 aa21.84■■□□□ 1.09
CCDC140-201ENST00000295226 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
CCDC140-201ENST00000295226 UBR1Q8IWV7 1749 aa21.82■■□□□ 1.08
CCDC140-201ENST00000295226 UHRF1BP1Q6BDS2 1440 aa21.81■■□□□ 1.08
CCDC140-201ENST00000295226 CEP170BQ9Y4F5 1589 aaPredicted RBP21.81■■□□□ 1.08
CCDC140-201ENST00000295226 THEMISQ8N1K5 641 aaPredicted RBP21.78■■□□□ 1.08
CCDC140-201ENST00000295226 TIMELESSQ9UNS1 1208 aa21.78■■□□□ 1.08
CCDC140-201ENST00000295226 PPP1R15AO75807 674 aaPredicted RBP21.77■■□□□ 1.08
CCDC140-201ENST00000295226 NEURL4Q96JN8 1562 aa21.76■■□□□ 1.07
CCDC140-201ENST00000295226 ADGRF5Q8IZF2 1346 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms