RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 NAIPQ13075 1403 aa23.01■■□□□ 1.27
NCK1-201ENST00000288986 WASHC2CQ9Y4E1 1318 aa23■■□□□ 1.27
NCK1-201ENST00000288986 HFM1A2PYH4 1435 aa23■■□□□ 1.27
NCK1-201ENST00000288986 MADDQ8WXG6 1647 aa22.99■■□□□ 1.27
NCK1-201ENST00000288986 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
NCK1-201ENST00000288986 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
NCK1-201ENST00000288986 KANK1Q14678 1352 aa22.95■■□□□ 1.26
NCK1-201ENST00000288986 RNF17Q9BXT8 1623 aaKnown RBP22.94■■□□□ 1.26
NCK1-201ENST00000288986 CNTLNQ9NXG0 1405 aa22.93■■□□□ 1.26
NCK1-201ENST00000288986 CEBPAP49715 358 aaPredicted RBP22.93■■□□□ 1.26
NCK1-201ENST00000288986 RIMS1Q86UR5 1692 aaKnown RBP22.93■■□□□ 1.26
NCK1-201ENST00000288986 PTPRMP28827 1452 aa22.92■■□□□ 1.26
NCK1-201ENST00000288986 GCC2Q8IWJ2 1684 aa22.91■■□□□ 1.26
NCK1-201ENST00000288986 ZMYM3Q14202 1370 aa22.91■■□□□ 1.26
NCK1-201ENST00000288986 MROH1Q8NDA8 1641 aa22.91■■□□□ 1.26
NCK1-201ENST00000288986 SETD5Q9C0A6 1442 aa22.9■■□□□ 1.26
NCK1-201ENST00000288986 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
NCK1-201ENST00000288986 PRDM15P57071 1507 aaPredicted RBP22.9■■□□□ 1.26
NCK1-201ENST00000288986 KDM5DQ9BY66 1539 aa22.9■■□□□ 1.26
NCK1-201ENST00000288986 TRIM52Q96A61 297 aa22.9■■□□□ 1.26
NCK1-201ENST00000288986 DEPDC5O75140 1603 aa22.89■■□□□ 1.26
NCK1-201ENST00000288986 NUP155O75694 1391 aa22.89■■□□□ 1.25
NCK1-201ENST00000288986 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
NCK1-201ENST00000288986 ABCC3O15438 1527 aa22.86■■□□□ 1.25
NCK1-201ENST00000288986 FAM135AQ9P2D6 1515 aa22.86■■□□□ 1.25
NCK1-201ENST00000288986 HRCP23327 699 aa22.85■■□□□ 1.25
NCK1-201ENST00000288986 UNC13BO14795 1591 aa22.84■■□□□ 1.25
NCK1-201ENST00000288986 RAB3GAP2Q9H2M9 1393 aa22.83■■□□□ 1.25
NCK1-201ENST00000288986 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
NCK1-201ENST00000288986 ZC3H13Q5T200 1668 aaKnown RBP22.81■■□□□ 1.24
NCK1-201ENST00000288986 CEP152O94986 1710 aa22.81■■□□□ 1.24
NCK1-201ENST00000288986 MROH2AA6NES4 1674 aa22.81■■□□□ 1.24
NCK1-201ENST00000288986 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
NCK1-201ENST00000288986 C3P01024 1663 aa22.8■■□□□ 1.24
NCK1-201ENST00000288986 LMTK2Q8IWU2 1503 aa22.78■■□□□ 1.24
NCK1-201ENST00000288986 ACIN1Q9UKV3 1341 aaKnown RBP22.77■■□□□ 1.24
NCK1-201ENST00000288986 CAMSAP1Q5T5Y3 1602 aa22.77■■□□□ 1.24
NCK1-201ENST00000288986 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
NCK1-201ENST00000288986 PZPP20742 1482 aa22.76■■□□□ 1.23
NCK1-201ENST00000288986 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
NCK1-201ENST00000288986 NPATQ14207 1427 aa22.75■■□□□ 1.23
NCK1-201ENST00000288986 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
NCK1-201ENST00000288986 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
NCK1-201ENST00000288986 TET3O43151 1660 aa22.71■■□□□ 1.23
NCK1-201ENST00000288986 PKD2Q13563 968 aa22.7■■□□□ 1.23
NCK1-201ENST00000288986 MPHOSPH9Q99550 1183 aa22.7■■□□□ 1.23
NCK1-201ENST00000288986 CFAP65Q6ZU64 1925 aaKnown RBP22.7■■□□□ 1.22
NCK1-201ENST00000288986 TNRQ92752 1358 aa22.69■■□□□ 1.22
NCK1-201ENST00000288986 ERVK-7P63135 1459 aa22.67■■□□□ 1.22
NCK1-201ENST00000288986 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
NCK1-201ENST00000288986 SETD1BQ9UPS6 1966 aaKnown RBP22.67■■□□□ 1.22
NCK1-201ENST00000288986 FOXD1Q16676 465 aa22.65■■□□□ 1.22
NCK1-201ENST00000288986 UHRF1BP1Q6BDS2 1440 aa22.64■■□□□ 1.22
NCK1-201ENST00000288986 SPATA31D1Q6ZQQ2 1576 aa22.64■■□□□ 1.22
NCK1-201ENST00000288986 E9PCH4 1651 aa22.64■■□□□ 1.22
NCK1-201ENST00000288986 PREX1Q8TCU6 1659 aa22.63■■□□□ 1.21
NCK1-201ENST00000288986 ZEB1P37275 1124 aaPredicted RBP22.62■■□□□ 1.21
NCK1-201ENST00000288986 NOS1P29475 1434 aa22.61■■□□□ 1.21
NCK1-201ENST00000288986 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
NCK1-201ENST00000288986 IDI1Q13907 227 aa22.59■■□□□ 1.21
NCK1-201ENST00000288986 SLC52A1Q9NWF4 448 aa22.59■■□□□ 1.21
NCK1-201ENST00000288986 HSPA2P54652 639 aa22.57■■□□□ 1.2
NCK1-201ENST00000288986 LMTK3Q96Q04 1460 aa22.57■■□□□ 1.2
NCK1-201ENST00000288986 NLRP1Q9C000 1473 aa22.57■■□□□ 1.2
NCK1-201ENST00000288986 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
NCK1-201ENST00000288986 MYO3AQ8NEV4 1616 aa22.56■■□□□ 1.2
NCK1-201ENST00000288986 SYNMO15061 1565 aa22.55■■□□□ 1.2
NCK1-201ENST00000288986 PTPRTO14522 1441 aa22.54■■□□□ 1.2
NCK1-201ENST00000288986 A2ML1A8K2U0 1454 aa22.53■■□□□ 1.2
NCK1-201ENST00000288986 CEP170BQ9Y4F5 1589 aaPredicted RBP22.53■■□□□ 1.2
NCK1-201ENST00000288986 CHGAP10645 457 aaKnown RBP22.52■■□□□ 1.2
NCK1-201ENST00000288986 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.19
NCK1-201ENST00000288986 THEMISQ8N1K5 641 aaPredicted RBP22.51■■□□□ 1.19
NCK1-201ENST00000288986 PLA2R1Q13018 1463 aa22.51■■□□□ 1.19
NCK1-201ENST00000288986 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
NCK1-201ENST00000288986 UGGT1Q9NYU2 1555 aa22.5■■□□□ 1.19
NCK1-201ENST00000288986 TRPM2O94759 1503 aa22.48■■□□□ 1.19
NCK1-201ENST00000288986 ZNF142P52746 1687 aaPredicted RBP22.47■■□□□ 1.19
NCK1-201ENST00000288986 PIK3C2BO00750 1634 aa22.47■■□□□ 1.19
NCK1-201ENST00000288986 CLSPNQ9HAW4 1339 aa22.46■■□□□ 1.19
NCK1-201ENST00000288986 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.19
NCK1-201ENST00000288986 ANKRD30BQ9BXX2 1392 aa22.44■■□□□ 1.18
NCK1-201ENST00000288986 UBR1Q8IWV7 1749 aa22.42■■□□□ 1.18
NCK1-201ENST00000288986 CLTCL1P53675 1640 aa22.41■■□□□ 1.18
NCK1-201ENST00000288986 ZNF326Q5BKZ1 582 aaKnown RBP22.41■■□□□ 1.18
NCK1-201ENST00000288986 ANKLE2Q86XL3 938 aa22.4■■□□□ 1.18
NCK1-201ENST00000288986 ADGRB3O60242 1522 aa22.4■■□□□ 1.18
NCK1-201ENST00000288986 NCKAP5LQ9HCH0 1330 aa22.38■■□□□ 1.17
NCK1-201ENST00000288986 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
NCK1-201ENST00000288986 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
NCK1-201ENST00000288986 TXNDC2Q86VQ3 553 aa22.37■■□□□ 1.17
NCK1-201ENST00000288986 EID1Q9Y6B2 187 aa22.37■■□□□ 1.17
NCK1-201ENST00000288986 RGL3Q3MIN7 710 aa22.37■■□□□ 1.17
NCK1-201ENST00000288986 KDM5AP29375 1690 aaKnown RBP22.36■■□□□ 1.17
NCK1-201ENST00000288986 HDGFP51858 240 aaKnown RBP22.35■■□□□ 1.17
NCK1-201ENST00000288986 LTKP29376 864 aa22.35■■□□□ 1.17
NCK1-201ENST00000288986 NUTM2DQ5VT03 806 aaPredicted RBP22.35■■□□□ 1.17
NCK1-201ENST00000288986 KIF1BO60333 1816 aa22.33■■□□□ 1.17
NCK1-201ENST00000288986 MYO5BQ9ULV0 1848 aa22.33■■□□□ 1.16
NCK1-201ENST00000288986 SLIT1O75093 1534 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms