RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 FAM182BQ5T319 152 aa4.93□□□□□ -1.62
SEMA3D-201ENST00000284136 ZNF710Q8N1W2 664 aa4.93□□□□□ -1.62
SEMA3D-201ENST00000284136 ACSBG1Q96GR2 724 aa4.93□□□□□ -1.62
SEMA3D-201ENST00000284136 RBM5P52756 815 aaKnown RBP eCLIP4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 FAM98CQ17RN3 349 aaKnown RBP4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 NLRP2Q9NX02 1062 aa4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 TRIM37O94972 964 aa4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 NGEFQ8N5V2 710 aa4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 CARMIL2Q6F5E8 1435 aa4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 AK7Q96M32 723 aa4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 WASHC2AQ641Q2 1341 aa4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 CFDP1Q9UEE9 299 aaPredicted RBP4.92□□□□□ -1.62
SEMA3D-201ENST00000284136 NBPF15Q8N660 670 aa4.91□□□□□ -1.62
SEMA3D-201ENST00000284136 MSH6P52701 1360 aa4.91□□□□□ -1.62
SEMA3D-201ENST00000284136 EFCAB2Q5VUJ9 269 aa4.91□□□□□ -1.62
SEMA3D-201ENST00000284136 CEP164Q9UPV0 1460 aa4.91□□□□□ -1.62
SEMA3D-201ENST00000284136 PRKG1Q13976 671 aa4.9□□□□□ -1.62
SEMA3D-201ENST00000284136 KANK1Q14678 1352 aa4.9□□□□□ -1.62
SEMA3D-201ENST00000284136 TMEM265A0A087WTH1 108 aa4.9□□□□□ -1.62
SEMA3D-201ENST00000284136 PODXL2Q9NZ53 605 aa4.9□□□□□ -1.62
SEMA3D-201ENST00000284136 CC2D2AQ9P2K1 1620 aa4.9□□□□□ -1.63
SEMA3D-201ENST00000284136 MLLT1Q03111 559 aaPredicted RBP4.9□□□□□ -1.63
SEMA3D-201ENST00000284136 NEUROD1Q13562 356 aa4.9□□□□□ -1.63
SEMA3D-201ENST00000284136 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
SEMA3D-201ENST00000284136 CIZ1Q9ULV3 898 aaPredicted RBP4.89□□□□□ -1.63
SEMA3D-201ENST00000284136 TRPC5Q9UL62 973 aaPredicted RBP4.89□□□□□ -1.63
SEMA3D-201ENST00000284136 HCN4Q9Y3Q4 1203 aa4.89□□□□□ -1.63
SEMA3D-201ENST00000284136 DEFB132Q7Z7B7 95 aa4.89□□□□□ -1.63
SEMA3D-201ENST00000284136 C1QTNF8P60827 252 aa4.88□□□□□ -1.63
SEMA3D-201ENST00000284136 ANO8Q9HCE9 1232 aaPredicted RBP4.88□□□□□ -1.63
SEMA3D-201ENST00000284136 CHMP3Q9Y3E7 222 aa4.88□□□□□ -1.63
SEMA3D-201ENST00000284136 MKRN3Q13064 507 aaKnown RBP4.88□□□□□ -1.63
SEMA3D-201ENST00000284136 AFF2P51816 1311 aa4.88□□□□□ -1.63
SEMA3D-201ENST00000284136 PTPRGP23470 1445 aa4.88□□□□□ -1.63
SEMA3D-201ENST00000284136 KCNJ4P48050 445 aa4.87□□□□□ -1.63
SEMA3D-201ENST00000284136 ZC3H6P61129 1189 aaKnown RBP4.87□□□□□ -1.63
SEMA3D-201ENST00000284136 VSIG10Q8N0Z9 540 aa4.87□□□□□ -1.63
SEMA3D-201ENST00000284136 ZNF335Q9H4Z2 1342 aaPredicted RBP4.87□□□□□ -1.63
SEMA3D-201ENST00000284136 KIF22Q14807 665 aa4.87□□□□□ -1.63
SEMA3D-201ENST00000284136 GRIN3BO60391 1043 aa4.86□□□□□ -1.63
SEMA3D-201ENST00000284136 CUX2O14529 1486 aa4.86□□□□□ -1.63
SEMA3D-201ENST00000284136 FOXD4L1Q9NU39 408 aa4.86□□□□□ -1.63
SEMA3D-201ENST00000284136 AMPHP49418 695 aa4.86□□□□□ -1.63
SEMA3D-201ENST00000284136 UHRF1BP1Q6BDS2 1440 aa4.86□□□□□ -1.63
SEMA3D-201ENST00000284136 SPAG9O60271 1321 aaKnown RBP4.86□□□□□ -1.63
SEMA3D-201ENST00000284136 KRT27Q7Z3Y8 459 aa4.86□□□□□ -1.63
SEMA3D-201ENST00000284136 RBM6P78332 1123 aaKnown RBP4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 NF2P35240 595 aa4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 VPS53Q5VIR6 699 aa4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 NOL8Q76FK4 1167 aaKnown RBP4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 TSPYL2Q9H2G4 693 aaPredicted RBP4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 RRP7BPQ9NSQ0 103 aa4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 RSF1Q96T23 1441 aaPredicted RBP4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 TSKSQ9UJT2 592 aa4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 PARP3Q9Y6F1 533 aa4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 FAM161AQ3B820 660 aa4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 TAF7LQ5H9L4 462 aa4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 ZFP91Q96JP5 570 aaPredicted RBP4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 LAS1LQ9Y4W2 734 aaKnown RBP4.85□□□□□ -1.63
SEMA3D-201ENST00000284136 ATAD2Q6PL18 1390 aa4.84□□□□□ -1.63
SEMA3D-201ENST00000284136 MPNDQ8N594 471 aa4.84□□□□□ -1.63
SEMA3D-201ENST00000284136 LRRC59Q96AG4 307 aaKnown RBP4.84□□□□□ -1.63
SEMA3D-201ENST00000284136 NESP48681 1621 aa4.84□□□□□ -1.63
SEMA3D-201ENST00000284136 SOX10P56693 466 aa4.84□□□□□ -1.63
SEMA3D-201ENST00000284136 SOGA1O94964 1423 aa4.84□□□□□ -1.64
SEMA3D-201ENST00000284136 AQRO60306 1485 aaKnown RBP eCLIP4.84□□□□□ -1.64
SEMA3D-201ENST00000284136 CABP2Q9NPB3 220 aa4.84□□□□□ -1.64
SEMA3D-201ENST00000284136 ZPR1O75312 459 aa4.83□□□□□ -1.64
SEMA3D-201ENST00000284136 SSTR3P32745 418 aaPredicted RBP4.83□□□□□ -1.64
SEMA3D-201ENST00000284136 DGKZQ13574 1117 aa4.83□□□□□ -1.64
SEMA3D-201ENST00000284136 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
SEMA3D-201ENST00000284136 JDP2Q8WYK2 163 aa4.83□□□□□ -1.64
SEMA3D-201ENST00000284136 LBHD1Q9BQE6 289 aaPredicted RBP4.83□□□□□ -1.64
SEMA3D-201ENST00000284136 TTC16Q8NEE8 873 aa4.83□□□□□ -1.64
SEMA3D-201ENST00000284136 TRIM26Q12899 539 aaPredicted RBP4.82□□□□□ -1.64
SEMA3D-201ENST00000284136 RNF181Q9P0P0 153 aa4.82□□□□□ -1.64
SEMA3D-201ENST00000284136 KDM2BQ8NHM5 1336 aa4.82□□□□□ -1.64
SEMA3D-201ENST00000284136 RFC4P35249 363 aa4.82□□□□□ -1.64
SEMA3D-201ENST00000284136 IFFO2Q5TF58 517 aa4.82□□□□□ -1.64
SEMA3D-201ENST00000284136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.82□□□□□ -1.64
SEMA3D-201ENST00000284136 DLL1O00548 723 aa4.81□□□□□ -1.64
SEMA3D-201ENST00000284136 CANXP27824 592 aaKnown RBP4.81□□□□□ -1.64
SEMA3D-201ENST00000284136 FAM161BQ96MY7 647 aa4.81□□□□□ -1.64
SEMA3D-201ENST00000284136 TSPOAP1O95153 1857 aa4.81□□□□□ -1.64
SEMA3D-201ENST00000284136 IGFBP4P22692 258 aa4.81□□□□□ -1.64
SEMA3D-201ENST00000284136 FOXO3O43524 673 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 ARHGEF6Q15052 776 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 RRAGCQ9HB90 399 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 KDM4FA0A1W2PPD8 638 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 EXOC5O00471 708 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 DDX17Q92841 729 aaKnown RBP4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 PCGF6Q9BYE7 350 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 GPRASP1Q5JY77 1395 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 CADPS2Q86UW7 1296 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 CABLES1Q8TDN4 633 aa4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 PRDM5Q9NQX1 630 aaPredicted RBP4.8□□□□□ -1.64
SEMA3D-201ENST00000284136 VPS37DQ86XT2 251 aa4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 WWC1Q8IX03 1113 aa4.79□□□□□ -1.64
SEMA3D-201ENST00000284136 TSC1Q92574 1164 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms