RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 ANKRD50Q9ULJ7 1429 aa35.78■■■■□ 3.32
CTF1-201ENST00000279804 MROH1Q8NDA8 1641 aa35.75■■■■□ 3.31
CTF1-201ENST00000279804 PCGF6Q9BYE7 350 aa35.73■■■■□ 3.31
CTF1-201ENST00000279804 NAIPQ13075 1403 aa35.73■■■■□ 3.31
CTF1-201ENST00000279804 DEPDC5O75140 1603 aa35.72■■■■□ 3.31
CTF1-201ENST00000279804 CLTCQ00610 1675 aaKnown RBP35.72■■■■□ 3.31
CTF1-201ENST00000279804 HFM1A2PYH4 1435 aa35.69■■■■□ 3.3
CTF1-201ENST00000279804 CEP152O94986 1710 aa35.66■■■■□ 3.3
CTF1-201ENST00000279804 PRDM15P57071 1507 aaPredicted RBP35.65■■■■□ 3.3
CTF1-201ENST00000279804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.62■■■■□ 3.29
CTF1-201ENST00000279804 UNC13BO14795 1591 aa35.62■■■■□ 3.29
CTF1-201ENST00000279804 ESF1Q9H501 851 aaKnown RBP35.61■■■■□ 3.29
CTF1-201ENST00000279804 KDM5DQ9BY66 1539 aa35.6■■■■□ 3.29
CTF1-201ENST00000279804 MROH2AA6NES4 1674 aa35.6■■■■□ 3.29
CTF1-201ENST00000279804 PTPRMP28827 1452 aa35.6■■■■□ 3.29
CTF1-201ENST00000279804 C3P01024 1663 aa35.59■■■■□ 3.29
CTF1-201ENST00000279804 ZC3H13Q5T200 1668 aaKnown RBP35.59■■■■□ 3.29
CTF1-201ENST00000279804 PLPPR3Q6T4P5 718 aa35.56■■■■□ 3.28
CTF1-201ENST00000279804 WASHC2CQ9Y4E1 1318 aa35.56■■■■□ 3.28
CTF1-201ENST00000279804 ABCC3O15438 1527 aa35.56■■■■□ 3.28
CTF1-201ENST00000279804 PPP6R1Q9UPN7 881 aa35.56■■■■□ 3.28
CTF1-201ENST00000279804 CNTLNQ9NXG0 1405 aa35.55■■■■□ 3.28
CTF1-201ENST00000279804 FAM135AQ9P2D6 1515 aa35.54■■■■□ 3.28
CTF1-201ENST00000279804 VWDEQ8N2E2 1590 aa35.54■■■■□ 3.28
CTF1-201ENST00000279804 CAMSAP1Q5T5Y3 1602 aa35.52■■■■□ 3.28
CTF1-201ENST00000279804 CEBPAP49715 358 aaPredicted RBP35.51■■■■□ 3.28
CTF1-201ENST00000279804 SETD5Q9C0A6 1442 aa35.5■■■■□ 3.27
CTF1-201ENST00000279804 KANK1Q14678 1352 aa35.5■■■■□ 3.27
CTF1-201ENST00000279804 CFAP65Q6ZU64 1925 aaKnown RBP35.48■■■■□ 3.27
CTF1-201ENST00000279804 ZMYM3Q14202 1370 aa35.48■■■■□ 3.27
CTF1-201ENST00000279804 IQGAP3Q86VI3 1631 aa35.47■■■■□ 3.27
CTF1-201ENST00000279804 NUP155O75694 1391 aa35.43■■■■□ 3.26
CTF1-201ENST00000279804 LMTK2Q8IWU2 1503 aa35.42■■■■□ 3.26
CTF1-201ENST00000279804 RAB3GAP2Q9H2M9 1393 aa35.41■■■■□ 3.26
CTF1-201ENST00000279804 TET3O43151 1660 aa35.4■■■■□ 3.26
CTF1-201ENST00000279804 TRIM52Q96A61 297 aa35.37■■■■□ 3.25
CTF1-201ENST00000279804 EFCAB6Q5THR3 1501 aa35.37■■■■□ 3.25
CTF1-201ENST00000279804 PZPP20742 1482 aa35.35■■■■□ 3.25
CTF1-201ENST00000279804 AEBP2Q6ZN18 517 aaPredicted RBP35.35■■■■□ 3.25
CTF1-201ENST00000279804 E9PCH4 1651 aa35.34■■■■□ 3.25
CTF1-201ENST00000279804 FBXO31Q5XUX0 539 aaPredicted RBP35.33■■■■□ 3.25
CTF1-201ENST00000279804 PREX1Q8TCU6 1659 aa35.32■■■■□ 3.24
CTF1-201ENST00000279804 NPATQ14207 1427 aa35.31■■■■□ 3.24
CTF1-201ENST00000279804 ARHGAP31Q2M1Z3 1444 aa35.29■■■■□ 3.24
CTF1-201ENST00000279804 SETD1BQ9UPS6 1966 aaKnown RBP35.28■■■■□ 3.24
CTF1-201ENST00000279804 ERVK-7P63135 1459 aa35.23■■■■□ 3.23
CTF1-201ENST00000279804 SPATA31D1Q6ZQQ2 1576 aa35.23■■■■□ 3.23
CTF1-201ENST00000279804 MYO3AQ8NEV4 1616 aa35.21■■■■□ 3.23
CTF1-201ENST00000279804 RPRD2Q5VT52 1461 aaKnown RBP35.19■■■■□ 3.22
CTF1-201ENST00000279804 SLC4A1APQ9BWU0 796 aaKnown RBP35.18■■■■□ 3.22
CTF1-201ENST00000279804 TNRQ92752 1358 aa35.16■■■■□ 3.22
CTF1-201ENST00000279804 SYNMO15061 1565 aa35.15■■■■□ 3.22
CTF1-201ENST00000279804 HRCP23327 699 aa35.15■■■■□ 3.22
CTF1-201ENST00000279804 SPHKAPQ2M3C7 1700 aa35.14■■■■□ 3.22
CTF1-201ENST00000279804 PKD2Q13563 968 aa35.13■■■■□ 3.21
CTF1-201ENST00000279804 MPHOSPH9Q99550 1183 aa35.13■■■■□ 3.21
CTF1-201ENST00000279804 ACIN1Q9UKV3 1341 aaKnown RBP35.12■■■■□ 3.21
CTF1-201ENST00000279804 NOS1P29475 1434 aa35.12■■■■□ 3.21
CTF1-201ENST00000279804 UHRF1BP1Q6BDS2 1440 aa35.1■■■■□ 3.21
CTF1-201ENST00000279804 ZNF142P52746 1687 aaPredicted RBP35.1■■■■□ 3.21
CTF1-201ENST00000279804 LMTK3Q96Q04 1460 aa35.09■■■■□ 3.21
CTF1-201ENST00000279804 FOXD1Q16676 465 aa35.08■■■■□ 3.21
CTF1-201ENST00000279804 CEP170BQ9Y4F5 1589 aaPredicted RBP35.07■■■■□ 3.2
CTF1-201ENST00000279804 UGGT1Q9NYU2 1555 aa35.05■■■■□ 3.2
CTF1-201ENST00000279804 PIK3C2BO00750 1634 aa35.03■■■■□ 3.2
CTF1-201ENST00000279804 NLRP1Q9C000 1473 aa35.02■■■■□ 3.2
CTF1-201ENST00000279804 A2ML1A8K2U0 1454 aa35■■■■□ 3.19
CTF1-201ENST00000279804 PTPRTO14522 1441 aa34.99■■■■□ 3.19
CTF1-201ENST00000279804 PLA2R1Q13018 1463 aa34.98■■■■□ 3.19
CTF1-201ENST00000279804 UBR1Q8IWV7 1749 aa34.98■■■■□ 3.19
CTF1-201ENST00000279804 MYO5BQ9ULV0 1848 aa34.97■■■■□ 3.19
CTF1-201ENST00000279804 TRPM2O94759 1503 aa34.97■■■■□ 3.19
CTF1-201ENST00000279804 HSPA2P54652 639 aa34.96■■■■□ 3.19
CTF1-201ENST00000279804 IDI1Q13907 227 aa34.95■■■■□ 3.19
CTF1-201ENST00000279804 CLTCL1P53675 1640 aa34.95■■■■□ 3.19
CTF1-201ENST00000279804 SLC52A1Q9NWF4 448 aa34.9■■■■□ 3.18
CTF1-201ENST00000279804 KDM5AP29375 1690 aaKnown RBP34.88■■■■□ 3.17
CTF1-201ENST00000279804 KIF1BO60333 1816 aa34.88■■■■□ 3.17
CTF1-201ENST00000279804 ADGRB3O60242 1522 aa34.87■■■■□ 3.17
CTF1-201ENST00000279804 TMEM131LA2VDJ0 1609 aa34.87■■■■□ 3.17
CTF1-201ENST00000279804 STAG3Q9UJ98 1225 aa34.82■■■■□ 3.17
CTF1-201ENST00000279804 DHX57Q6P158 1386 aaKnown RBP34.8■■■■□ 3.16
CTF1-201ENST00000279804 STRCQ7RTU9 1775 aa34.8■■■■□ 3.16
CTF1-201ENST00000279804 CHGAP10645 457 aaKnown RBP34.8■■■■□ 3.16
CTF1-201ENST00000279804 ANKRD30BQ9BXX2 1392 aa34.78■■■■□ 3.16
CTF1-201ENST00000279804 CCDC144AA2RUR9 1427 aa34.78■■■■□ 3.16
CTF1-201ENST00000279804 THEMISQ8N1K5 641 aaPredicted RBP34.78■■■■□ 3.16
CTF1-201ENST00000279804 POLR1AO95602 1720 aaPredicted RBP34.76■■■■□ 3.15
CTF1-201ENST00000279804 SLIT1O75093 1534 aa34.7■■■■□ 3.15
CTF1-201ENST00000279804 ARHGAP23Q9P227 1491 aa34.69■■■■□ 3.14
CTF1-201ENST00000279804 TMEM2Q9UHN6 1383 aa34.68■■■■□ 3.14
CTF1-201ENST00000279804 NCKAP5LQ9HCH0 1330 aa34.68■■■■□ 3.14
CTF1-201ENST00000279804 NEURL4Q96JN8 1562 aa34.64■■■■□ 3.14
CTF1-201ENST00000279804 ZNF326Q5BKZ1 582 aaKnown RBP34.63■■■■□ 3.13
CTF1-201ENST00000279804 CCER1Q8TC90 406 aaPredicted RBP34.63■■■■□ 3.13
CTF1-201ENST00000279804 ZFYVE9O95405 1425 aa34.61■■■■□ 3.13
CTF1-201ENST00000279804 SPATA31E1Q6ZUB1 1445 aa34.61■■■■□ 3.13
CTF1-201ENST00000279804 RIMS2Q9UQ26 1411 aa34.61■■■■□ 3.13
CTF1-201ENST00000279804 LTKP29376 864 aa34.61■■■■□ 3.13
CTF1-201ENST00000279804 ANKLE2Q86XL3 938 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms