RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 EIF2AK4Q9P2K8 1649 aaKnown RBP37.15■■■■□ 3.54
SSBP4-201ENST00000270061 NPATQ14207 1427 aa37.14■■■■□ 3.54
SSBP4-201ENST00000270061 DUOX2Q9NRD8 1548 aa37.14■■■■□ 3.54
SSBP4-201ENST00000270061 FAM135AQ9P2D6 1515 aa37.13■■■■□ 3.53
SSBP4-201ENST00000270061 FAM50AQ14320 339 aaKnown RBP37.12■■■■□ 3.53
SSBP4-201ENST00000270061 KDM5DQ9BY66 1539 aa37.11■■■■□ 3.53
SSBP4-201ENST00000270061 RNF17Q9BXT8 1623 aaKnown RBP37.11■■■■□ 3.53
SSBP4-201ENST00000270061 KIF15Q9NS87 1388 aa37.11■■■■□ 3.53
SSBP4-201ENST00000270061 RRBP1Q9P2E9 1410 aaKnown RBP37.08■■■■□ 3.53
SSBP4-201ENST00000270061 WASHC2CQ9Y4E1 1318 aa37.08■■■■□ 3.53
SSBP4-201ENST00000270061 RRP7BPQ9NSQ0 103 aa37.07■■■■□ 3.53
SSBP4-201ENST00000270061 PTPRKQ15262 1439 aa37.05■■■■□ 3.52
SSBP4-201ENST00000270061 CHIC2Q9UKJ5 165 aa37.05■■■■□ 3.52
SSBP4-201ENST00000270061 ANKRD30AQ9BXX3 1397 aa37.03■■■■□ 3.52
SSBP4-201ENST00000270061 HRCP23327 699 aa37.01■■■■□ 3.52
SSBP4-201ENST00000270061 ERBINQ96RT1 1412 aa37.01■■■■□ 3.52
SSBP4-201ENST00000270061 ZC3H13Q5T200 1668 aaKnown RBP36.99■■■■□ 3.51
SSBP4-201ENST00000270061 MROH1Q8NDA8 1641 aa36.98■■■■□ 3.51
SSBP4-201ENST00000270061 NCOA1Q15788 1441 aa36.97■■■■□ 3.51
SSBP4-201ENST00000270061 MYO3AQ8NEV4 1616 aa36.97■■■■□ 3.51
SSBP4-201ENST00000270061 PZPP20742 1482 aa36.96■■■■□ 3.51
SSBP4-201ENST00000270061 ADGRL2O95490 1459 aa36.95■■■■□ 3.51
SSBP4-201ENST00000270061 ABCC3O15438 1527 aa36.94■■■■□ 3.5
SSBP4-201ENST00000270061 STRCQ7RTU9 1775 aa36.93■■■■□ 3.5
SSBP4-201ENST00000270061 ZNF142P52746 1687 aaPredicted RBP36.92■■■■□ 3.5
SSBP4-201ENST00000270061 CEP152O94986 1710 aa36.92■■■■□ 3.5
SSBP4-201ENST00000270061 PRDM15P57071 1507 aaPredicted RBP36.89■■■■□ 3.5
SSBP4-201ENST00000270061 FBXO31Q5XUX0 539 aaPredicted RBP36.89■■■■□ 3.5
SSBP4-201ENST00000270061 DEPDC5O75140 1603 aa36.88■■■■□ 3.49
SSBP4-201ENST00000270061 CEP170BQ9Y4F5 1589 aaPredicted RBP36.88■■■■□ 3.49
SSBP4-201ENST00000270061 CFAP65Q6ZU64 1925 aaKnown RBP36.84■■■■□ 3.49
SSBP4-201ENST00000270061 CAMSAP1Q5T5Y3 1602 aa36.84■■■■□ 3.49
SSBP4-201ENST00000270061 TNRQ92752 1358 aa36.84■■■■□ 3.49
SSBP4-201ENST00000270061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.81■■■■□ 3.485e-7■■■□□ 17.3
SSBP4-201ENST00000270061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.81■■■■□ 3.48
SSBP4-201ENST00000270061 DMRT2Q9Y5R5 561 aa36.81■■■■□ 3.48
SSBP4-201ENST00000270061 A2ML1A8K2U0 1454 aa36.79■■■■□ 3.48
SSBP4-201ENST00000270061 KANK1Q14678 1352 aa36.78■■■■□ 3.48
SSBP4-201ENST00000270061 ANKRD50Q9ULJ7 1429 aa36.77■■■■□ 3.48
SSBP4-201ENST00000270061 SPATA31D1Q6ZQQ2 1576 aa36.74■■■■□ 3.47
SSBP4-201ENST00000270061 ITGAEP38570 1179 aa36.73■■■■□ 3.47
SSBP4-201ENST00000270061 ROCK1Q13464 1354 aa36.73■■■■□ 3.47
SSBP4-201ENST00000270061 ERVK-7P63135 1459 aa36.71■■■■□ 3.47
SSBP4-201ENST00000270061 PLA2R1Q13018 1463 aa36.71■■■■□ 3.47
SSBP4-201ENST00000270061 NLRP1Q9C000 1473 aa36.71■■■■□ 3.47
SSBP4-201ENST00000270061 VWDEQ8N2E2 1590 aa36.7■■■■□ 3.47
SSBP4-201ENST00000270061 ARHGAP31Q2M1Z3 1444 aa36.69■■■■□ 3.46
SSBP4-201ENST00000270061 PTPRTO14522 1441 aa36.69■■■■□ 3.46
SSBP4-201ENST00000270061 LMTK2Q8IWU2 1503 aa36.66■■■■□ 3.46
SSBP4-201ENST00000270061 ZEB1P37275 1124 aaPredicted RBP36.63■■■■□ 3.46
SSBP4-201ENST00000270061 NCKAP5LQ9HCH0 1330 aa36.63■■■■□ 3.45
SSBP4-201ENST00000270061 UGGT1Q9NYU2 1555 aa36.62■■■■□ 3.45
SSBP4-201ENST00000270061 PKD2Q13563 968 aa36.61■■■■□ 3.45
SSBP4-201ENST00000270061 THEMISQ8N1K5 641 aaPredicted RBP36.58■■■■□ 3.45
SSBP4-201ENST00000270061 POLR1AO95602 1720 aaPredicted RBP36.57■■■■□ 3.44
SSBP4-201ENST00000270061 UNC13BO14795 1591 aa36.57■■■■□ 3.44
SSBP4-201ENST00000270061 EFCAB6Q5THR3 1501 aa36.57■■■■□ 3.44
SSBP4-201ENST00000270061 ILDR1Q86SU0 546 aaPredicted RBP36.56■■■■□ 3.44
SSBP4-201ENST00000270061 TET3O43151 1660 aa36.5■■■■□ 3.43
SSBP4-201ENST00000270061 CCER1Q8TC90 406 aaPredicted RBP36.5■■■■□ 3.43
SSBP4-201ENST00000270061 UBR1Q8IWV7 1749 aa36.5■■■■□ 3.43
SSBP4-201ENST00000270061 GCC2Q8IWJ2 1684 aa36.48■■■■□ 3.43
SSBP4-201ENST00000270061 CERKQ8TCT0 537 aa36.47■■■■□ 3.43
SSBP4-201ENST00000270061 ANKLE2Q86XL3 938 aa36.46■■■■□ 3.43
SSBP4-201ENST00000270061 RPRD2Q5VT52 1461 aaKnown RBP36.45■■■■□ 3.43
SSBP4-201ENST00000270061 NEURL4Q96JN8 1562 aa36.44■■■■□ 3.42
SSBP4-201ENST00000270061 IQGAP3Q86VI3 1631 aa36.44■■■■□ 3.42
SSBP4-201ENST00000270061 FBXO41Q8TF61 875 aa36.43■■■■□ 3.42
SSBP4-201ENST00000270061 PIK3C2BO00750 1634 aa36.42■■■■□ 3.42
SSBP4-201ENST00000270061 SYNMO15061 1565 aa36.42■■■■□ 3.42
SSBP4-201ENST00000270061 NOS1P29475 1434 aa36.42■■■■□ 3.42
SSBP4-201ENST00000270061 NUP155O75694 1391 aa36.39■■■■□ 3.42
SSBP4-201ENST00000270061 LTBP4Q8N2S1 1624 aa36.37■■■■□ 3.41
SSBP4-201ENST00000270061 E9PCH4 1651 aa36.36■■■■□ 3.41
SSBP4-201ENST00000270061 KDM5AP29375 1690 aaKnown RBP36.36■■■■□ 3.41
SSBP4-201ENST00000270061 IDI1Q13907 227 aa36.35■■■■□ 3.41
SSBP4-201ENST00000270061 NAIPQ13075 1403 aa36.34■■■■□ 3.41
SSBP4-201ENST00000270061 STAG3Q9UJ98 1225 aa36.34■■■■□ 3.41
SSBP4-201ENST00000270061 MED14O60244 1454 aa36.34■■■■□ 3.41
SSBP4-201ENST00000270061 ZNF335Q9H4Z2 1342 aaPredicted RBP36.32■■■■□ 3.41
SSBP4-201ENST00000270061 SLC52A1Q9NWF4 448 aa36.32■■■■□ 3.4
SSBP4-201ENST00000270061 IQGAP1P46940 1657 aa36.31■■■■□ 3.4
SSBP4-201ENST00000270061 NPHP4O75161 1426 aaPredicted RBP36.31■■■■□ 3.4
SSBP4-201ENST00000270061 SLIT1O75093 1534 aa36.3■■■■□ 3.4
SSBP4-201ENST00000270061 ARHGAP23Q9P227 1491 aa36.29■■■■□ 3.4
SSBP4-201ENST00000270061 SETD5Q9C0A6 1442 aa36.28■■■■□ 3.4
SSBP4-201ENST00000270061 HFM1A2PYH4 1435 aa36.27■■■■□ 3.4
SSBP4-201ENST00000270061 SCAF11Q99590 1463 aaKnown RBP36.26■■■■□ 3.4
SSBP4-201ENST00000270061 ADGRB3O60242 1522 aa36.25■■■■□ 3.39
SSBP4-201ENST00000270061 TMEM2Q9UHN6 1383 aa36.23■■■■□ 3.39
SSBP4-201ENST00000270061 TXNDC2Q86VQ3 553 aa36.22■■■■□ 3.39
SSBP4-201ENST00000270061 EID1Q9Y6B2 187 aa36.22■■■■□ 3.39
SSBP4-201ENST00000270061 LTKP29376 864 aa36.21■■■■□ 3.39
SSBP4-201ENST00000270061 MYO5BQ9ULV0 1848 aa36.2■■■■□ 3.39
SSBP4-201ENST00000270061 RAB3GAP2Q9H2M9 1393 aa36.2■■■■□ 3.39
SSBP4-201ENST00000270061 IQSEC2Q5JU85 1478 aa36.18■■■■□ 3.38
SSBP4-201ENST00000270061 DHX57Q6P158 1386 aaKnown RBP36.14■■■■□ 3.38
SSBP4-201ENST00000270061 SPHKAPQ2M3C7 1700 aa36.13■■■■□ 3.38
SSBP4-201ENST00000270061 TMEM131LA2VDJ0 1609 aa36.13■■■■□ 3.37
SSBP4-201ENST00000270061 CLSPNQ9HAW4 1339 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms