RNA–Protein interactions for RNA: ENST00000269740.8

SLC39A3-201, Transcript of solute carrier family 39 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A3, Length 1,502 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-201ENST00000269740 ARID4BQ4LE39 1312 aaPredicted RBP35.58■■■■□ 3.29
SLC39A3-201ENST00000269740 DEPDC5O75140 1603 aa35.57■■■■□ 3.29
SLC39A3-201ENST00000269740 UNC13BO14795 1591 aa35.53■■■■□ 3.28
SLC39A3-201ENST00000269740 GGT6Q6P531 493 aa35.5■■■■□ 3.27
SLC39A3-201ENST00000269740 PPP6R1Q9UPN7 881 aa35.5■■■■□ 3.27
SLC39A3-201ENST00000269740 PRDM15P57071 1507 aaPredicted RBP35.5■■■■□ 3.27
SLC39A3-201ENST00000269740 MROH1Q8NDA8 1641 aa35.49■■■■□ 3.27
SLC39A3-201ENST00000269740 KANK1Q14678 1352 aa35.44■■■■□ 3.26
SLC39A3-201ENST00000269740 FAM135AQ9P2D6 1515 aa35.44■■■■□ 3.26
SLC39A3-201ENST00000269740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.42■■■■□ 3.26
SLC39A3-201ENST00000269740 VWDEQ8N2E2 1590 aa35.42■■■■□ 3.26
SLC39A3-201ENST00000269740 MLECQ14165 292 aa35.42■■■■□ 3.26
SLC39A3-201ENST00000269740 NUP155O75694 1391 aa35.41■■■■□ 3.26
SLC39A3-201ENST00000269740 KDM5DQ9BY66 1539 aa35.41■■■■□ 3.26
SLC39A3-201ENST00000269740 TRIM52Q96A61 297 aa35.41■■■■□ 3.26
SLC39A3-201ENST00000269740 IQGAP3Q86VI3 1631 aa35.4■■■■□ 3.26
SLC39A3-201ENST00000269740 ZC3H13Q5T200 1668 aaKnown RBP35.38■■■■□ 3.25
SLC39A3-201ENST00000269740 WASHC2CQ9Y4E1 1318 aa35.36■■■■□ 3.25
SLC39A3-201ENST00000269740 LMTK2Q8IWU2 1503 aa35.33■■■■□ 3.25
SLC39A3-201ENST00000269740 ADAMTSL3P82987 1691 aa35.33■■■■□ 3.25
SLC39A3-201ENST00000269740 ESF1Q9H501 851 aaKnown RBP35.32■■■■□ 3.25
SLC39A3-201ENST00000269740 ABCC3O15438 1527 aa35.32■■■■□ 3.24
SLC39A3-201ENST00000269740 CEP152O94986 1710 aa35.32■■■■□ 3.24
SLC39A3-201ENST00000269740 FER1L4A9Z1Z3 1794 aa35.31■■■■□ 3.24
SLC39A3-201ENST00000269740 CNTLNQ9NXG0 1405 aa35.31■■■■□ 3.24
SLC39A3-201ENST00000269740 PZPP20742 1482 aa35.29■■■■□ 3.24
SLC39A3-201ENST00000269740 CLTCQ00610 1675 aaKnown RBP35.28■■■■□ 3.24
SLC39A3-201ENST00000269740 TET3O43151 1660 aa35.28■■■■□ 3.24
SLC39A3-201ENST00000269740 MROH2AA6NES4 1674 aa35.25■■■■□ 3.23
SLC39A3-201ENST00000269740 SLC4A1APQ9BWU0 796 aaKnown RBP35.25■■■■□ 3.23
SLC39A3-201ENST00000269740 MADDQ8WXG6 1647 aa35.25■■■■□ 3.23
SLC39A3-201ENST00000269740 MPHOSPH9Q99550 1183 aa35.24■■■■□ 3.23
SLC39A3-201ENST00000269740 CAMSAP1Q5T5Y3 1602 aa35.24■■■■□ 3.23
SLC39A3-201ENST00000269740 EFCAB6Q5THR3 1501 aa35.21■■■■□ 3.23
SLC39A3-201ENST00000269740 ARHGAP31Q2M1Z3 1444 aa35.2■■■■□ 3.22
SLC39A3-201ENST00000269740 RIMS1Q86UR5 1692 aaKnown RBP35.17■■■■□ 3.22
SLC39A3-201ENST00000269740 ZMYM3Q14202 1370 aa35.17■■■■□ 3.22
SLC39A3-201ENST00000269740 RPRD2Q5VT52 1461 aaKnown RBP35.16■■■■□ 3.22
SLC39A3-201ENST00000269740 E9PCH4 1651 aa35.16■■■■□ 3.22
SLC39A3-201ENST00000269740 PKD2Q13563 968 aa35.14■■■■□ 3.22
SLC39A3-201ENST00000269740 NPATQ14207 1427 aa35.12■■■■□ 3.21
SLC39A3-201ENST00000269740 DHX57Q6P158 1386 aaKnown RBP35.1■■■■□ 3.21
SLC39A3-201ENST00000269740 C3P01024 1663 aa35.1■■■■□ 3.21
SLC39A3-201ENST00000269740 CFAP65Q6ZU64 1925 aaKnown RBP35.08■■■■□ 3.21
SLC39A3-201ENST00000269740 KDM4FA0A1W2PPD8 638 aa35.07■■■■□ 3.21
SLC39A3-201ENST00000269740 PTPRMP28827 1452 aa35.04■■■■□ 3.2
SLC39A3-201ENST00000269740 PREX1Q8TCU6 1659 aa35.02■■■■□ 3.2
SLC39A3-201ENST00000269740 SPHKAPQ2M3C7 1700 aa35■■■■□ 3.19
SLC39A3-201ENST00000269740 FOXD1Q16676 465 aa34.99■■■■□ 3.19
SLC39A3-201ENST00000269740 PTPRTO14522 1441 aa34.99■■■■□ 3.19
SLC39A3-201ENST00000269740 CEBPAP49715 358 aaPredicted RBP34.98■■■■□ 3.19
SLC39A3-201ENST00000269740 NOS1P29475 1434 aa34.98■■■■□ 3.19
SLC39A3-201ENST00000269740 ERVK-7P63135 1459 aa34.98■■■■□ 3.19
SLC39A3-201ENST00000269740 SPATA31D1Q6ZQQ2 1576 aa34.98■■■■□ 3.19
SLC39A3-201ENST00000269740 FBXO31Q5XUX0 539 aaPredicted RBP34.96■■■■□ 3.19
SLC39A3-201ENST00000269740 ANKRD30BQ9BXX2 1392 aa34.93■■■■□ 3.18
SLC39A3-201ENST00000269740 SETD1BQ9UPS6 1966 aaKnown RBP34.93■■■■□ 3.18
SLC39A3-201ENST00000269740 TRPM2O94759 1503 aa34.92■■■■□ 3.18
SLC39A3-201ENST00000269740 PLA2R1Q13018 1463 aa34.91■■■■□ 3.18
SLC39A3-201ENST00000269740 SYNMO15061 1565 aa34.88■■■■□ 3.17
SLC39A3-201ENST00000269740 CLSPNQ9HAW4 1339 aa34.88■■■■□ 3.17
SLC39A3-201ENST00000269740 TNRQ92752 1358 aa34.87■■■■□ 3.17
SLC39A3-201ENST00000269740 PLPPR3Q6T4P5 718 aa34.86■■■■□ 3.17
SLC39A3-201ENST00000269740 CCER1Q8TC90 406 aaPredicted RBP34.86■■■■□ 3.17
SLC39A3-201ENST00000269740 SLC52A1Q9NWF4 448 aa34.86■■■■□ 3.17
SLC39A3-201ENST00000269740 PIK3C2BO00750 1634 aa34.83■■■■□ 3.17
SLC39A3-201ENST00000269740 CCDC144AA2RUR9 1427 aa34.82■■■■□ 3.16
SLC39A3-201ENST00000269740 NLRP1Q9C000 1473 aa34.78■■■■□ 3.16
SLC39A3-201ENST00000269740 CLTCL1P53675 1640 aa34.78■■■■□ 3.16
SLC39A3-201ENST00000269740 UGGT1Q9NYU2 1555 aa34.76■■■■□ 3.16
SLC39A3-201ENST00000269740 IDI1Q13907 227 aa34.76■■■■□ 3.15
SLC39A3-201ENST00000269740 MYO3AQ8NEV4 1616 aa34.74■■■■□ 3.15
SLC39A3-201ENST00000269740 KIF1BO60333 1816 aa34.74■■■■□ 3.15
SLC39A3-201ENST00000269740 KDM5AP29375 1690 aaKnown RBP34.7■■■■□ 3.15
SLC39A3-201ENST00000269740 A2ML1A8K2U0 1454 aa34.67■■■■□ 3.14
SLC39A3-201ENST00000269740 NEURL4Q96JN8 1562 aa34.67■■■■□ 3.14
SLC39A3-201ENST00000269740 ZNF142P52746 1687 aaPredicted RBP34.67■■■■□ 3.14
SLC39A3-201ENST00000269740 SIN3AQ96ST3 1273 aa34.66■■■■□ 3.14
SLC39A3-201ENST00000269740 UHRF1BP1Q6BDS2 1440 aa34.66■■■■□ 3.14
SLC39A3-201ENST00000269740 CEP170BQ9Y4F5 1589 aaPredicted RBP34.65■■■■□ 3.14
SLC39A3-201ENST00000269740 TMEM131LA2VDJ0 1609 aa34.64■■■■□ 3.14
SLC39A3-201ENST00000269740 ADGRB3O60242 1522 aa34.63■■■■□ 3.13
SLC39A3-201ENST00000269740 UBR1Q8IWV7 1749 aa34.62■■■■□ 3.13
SLC39A3-201ENST00000269740 STAG3Q9UJ98 1225 aa34.61■■■■□ 3.13
SLC39A3-201ENST00000269740 SPATA31E1Q6ZUB1 1445 aa34.61■■■■□ 3.13
SLC39A3-201ENST00000269740 NEUROD1Q13562 356 aa34.6■■■■□ 3.13
SLC39A3-201ENST00000269740 MYO5BQ9ULV0 1848 aa34.6■■■■□ 3.13
SLC39A3-201ENST00000269740 CHGAP10645 457 aaKnown RBP34.58■■■■□ 3.13
SLC39A3-201ENST00000269740 THEMISQ8N1K5 641 aaPredicted RBP34.55■■■■□ 3.12
SLC39A3-201ENST00000269740 RPGRIP1LQ68CZ1 1315 aa34.5■■■■□ 3.11
SLC39A3-201ENST00000269740 RGL3Q3MIN7 710 aa34.5■■■■□ 3.11
SLC39A3-201ENST00000269740 TIMELESSQ9UNS1 1208 aa34.5■■■■□ 3.11
SLC39A3-201ENST00000269740 ZNF326Q5BKZ1 582 aaKnown RBP34.48■■■■□ 3.11
SLC39A3-201ENST00000269740 LMTK3Q96Q04 1460 aa34.47■■■■□ 3.11
SLC39A3-201ENST00000269740 TONSLQ96HA7 1378 aa34.45■■■■□ 3.11
SLC39A3-201ENST00000269740 TMEM2Q9UHN6 1383 aa34.45■■■■□ 3.11
SLC39A3-201ENST00000269740 SLIT1O75093 1534 aa34.45■■■■□ 3.1
SLC39A3-201ENST00000269740 ARHGAP23Q9P227 1491 aa34.43■■■■□ 3.1
SLC39A3-201ENST00000269740 HDGFP51858 240 aaKnown RBP34.43■■■■□ 3.1
SLC39A3-201ENST00000269740 STAC3Q96MF2 364 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms