RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 CAMSAP1Q5T5Y3 1602 aa30.37■■■□□ 2.45
CASP6-201ENST00000265164 RNF17Q9BXT8 1623 aaKnown RBP30.37■■■□□ 2.45
CASP6-201ENST00000265164 FAM135AQ9P2D6 1515 aa30.36■■■□□ 2.45
CASP6-201ENST00000265164 CEP170BQ9Y4F5 1589 aaPredicted RBP30.36■■■□□ 2.45
CASP6-201ENST00000265164 EIF2AK4Q9P2K8 1649 aaKnown RBP30.35■■■□□ 2.45
CASP6-201ENST00000265164 ABCC5O15440 1437 aa30.35■■■□□ 2.45
CASP6-201ENST00000265164 NCOA1Q15788 1441 aa30.35■■■□□ 2.45
CASP6-201ENST00000265164 FBXO41Q8TF61 875 aa30.34■■■□□ 2.45
CASP6-201ENST00000265164 TCOF1Q13428 1488 aaKnown RBP30.34■■■□□ 2.45
CASP6-201ENST00000265164 DNMT1P26358 1616 aaKnown RBP30.33■■■□□ 2.45
CASP6-201ENST00000265164 WASHC2CQ9Y4E1 1318 aa30.32■■■□□ 2.44
CASP6-201ENST00000265164 SHANK2Q9UPX8 1470 aa30.32■■■□□ 2.44
CASP6-201ENST00000265164 TRIM26Q12899 539 aaPredicted RBP30.31■■■□□ 2.44
CASP6-201ENST00000265164 DMRT2Q9Y5R5 561 aa30.31■■■□□ 2.44
CASP6-201ENST00000265164 MROH1Q8NDA8 1641 aa30.31■■■□□ 2.44
CASP6-201ENST00000265164 DAPK1P53355 1430 aa30.3■■■□□ 2.44
CASP6-201ENST00000265164 PZPP20742 1482 aa30.3■■■□□ 2.44
CASP6-201ENST00000265164 FBXO31Q5XUX0 539 aaPredicted RBP30.29■■■□□ 2.44
CASP6-201ENST00000265164 DUOX2Q9NRD8 1548 aa30.29■■■□□ 2.44
CASP6-201ENST00000265164 PTPRTO14522 1441 aa30.27■■■□□ 2.44
CASP6-201ENST00000265164 ZC3H13Q5T200 1668 aaKnown RBP30.27■■■□□ 2.44
CASP6-201ENST00000265164 ABCC3O15438 1527 aa30.25■■■□□ 2.43
CASP6-201ENST00000265164 KIF15Q9NS87 1388 aa30.25■■■□□ 2.43
CASP6-201ENST00000265164 CEP152O94986 1710 aa30.24■■■□□ 2.43
CASP6-201ENST00000265164 CERKQ8TCT0 537 aa30.24■■■□□ 2.43
CASP6-201ENST00000265164 A2ML1A8K2U0 1454 aa30.22■■■□□ 2.43
CASP6-201ENST00000265164 TNRQ92752 1358 aa30.22■■■□□ 2.43
CASP6-201ENST00000265164 RRP7BPQ9NSQ0 103 aa30.22■■■□□ 2.43
CASP6-201ENST00000265164 NCKAP5LQ9HCH0 1330 aa30.21■■■□□ 2.43
CASP6-201ENST00000265164 PLA2R1Q13018 1463 aa30.21■■■□□ 2.43
CASP6-201ENST00000265164 ERBINQ96RT1 1412 aa30.18■■■□□ 2.42
CASP6-201ENST00000265164 CHIC2Q9UKJ5 165 aa30.17■■■□□ 2.42
CASP6-201ENST00000265164 PRDM15P57071 1507 aaPredicted RBP30.16■■■□□ 2.42
CASP6-201ENST00000265164 DEPDC5O75140 1603 aa30.14■■■□□ 2.42
CASP6-201ENST00000265164 CFAP65Q6ZU64 1925 aaKnown RBP30.14■■■□□ 2.41
CASP6-201ENST00000265164 SPATA31D1Q6ZQQ2 1576 aa30.13■■■□□ 2.41
CASP6-201ENST00000265164 LTBP4Q8N2S1 1624 aa30.13■■■□□ 2.41
CASP6-201ENST00000265164 PCGF6Q9BYE7 350 aa30.12■■■□□ 2.41
CASP6-201ENST00000265164 PKD2Q13563 968 aa30.11■■■□□ 2.41
CASP6-201ENST00000265164 FAM50AQ14320 339 aaKnown RBP30.11■■■□□ 2.41
CASP6-201ENST00000265164 ANKRD30AQ9BXX3 1397 aa30.1■■■□□ 2.41
CASP6-201ENST00000265164 POLR1AO95602 1720 aaPredicted RBP30.1■■■□□ 2.41
CASP6-201ENST00000265164 ERVK-7P63135 1459 aa30.09■■■□□ 2.41
CASP6-201ENST00000265164 NLRP1Q9C000 1473 aa30.09■■■□□ 2.41
CASP6-201ENST00000265164 ADGRL2O95490 1459 aa30.08■■■□□ 2.41
CASP6-201ENST00000265164 UGGT1Q9NYU2 1555 aa30.06■■■□□ 2.4
CASP6-201ENST00000265164 NEURL4Q96JN8 1562 aa30.06■■■□□ 2.4
CASP6-201ENST00000265164 RRBP1Q9P2E9 1410 aaKnown RBP30.05■■■□□ 2.4
CASP6-201ENST00000265164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.04■■■□□ 2.4
CASP6-201ENST00000265164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.03■■■□□ 2.4
CASP6-201ENST00000265164 ZNF335Q9H4Z2 1342 aaPredicted RBP30.02■■■□□ 2.4
CASP6-201ENST00000265164 ARHGAP31Q2M1Z3 1444 aa30■■■□□ 2.39
CASP6-201ENST00000265164 VWDEQ8N2E2 1590 aa30■■■□□ 2.39
CASP6-201ENST00000265164 UBR1Q8IWV7 1749 aa29.97■■■□□ 2.39
CASP6-201ENST00000265164 THEMISQ8N1K5 641 aaPredicted RBP29.96■■■□□ 2.39
CASP6-201ENST00000265164 LMTK2Q8IWU2 1503 aa29.95■■■□□ 2.39
CASP6-201ENST00000265164 KANK1Q14678 1352 aa29.95■■■□□ 2.38
CASP6-201ENST00000265164 ANKRD50Q9ULJ7 1429 aa29.92■■■□□ 2.38
CASP6-201ENST00000265164 ANKLE2Q86XL3 938 aa29.91■■■□□ 2.38
CASP6-201ENST00000265164 IQSEC2Q5JU85 1478 aa29.91■■■□□ 2.38
CASP6-201ENST00000265164 MED14O60244 1454 aa29.88■■■□□ 2.37
CASP6-201ENST00000265164 EFCAB6Q5THR3 1501 aa29.88■■■□□ 2.37
CASP6-201ENST00000265164 PIK3C2BO00750 1634 aa29.87■■■□□ 2.37
CASP6-201ENST00000265164 IQGAP1P46940 1657 aa29.87■■■□□ 2.37
CASP6-201ENST00000265164 NPHP4O75161 1426 aaPredicted RBP29.86■■■□□ 2.37
CASP6-201ENST00000265164 SYNMO15061 1565 aa29.85■■■□□ 2.37
CASP6-201ENST00000265164 UNC13BO14795 1591 aa29.81■■■□□ 2.36
CASP6-201ENST00000265164 ROCK1Q13464 1354 aa29.81■■■□□ 2.36
CASP6-201ENST00000265164 ITGAEP38570 1179 aa29.81■■■□□ 2.36
CASP6-201ENST00000265164 SLIT1O75093 1534 aa29.79■■■□□ 2.36
CASP6-201ENST00000265164 ARHGAP23Q9P227 1491 aa29.79■■■□□ 2.36
CASP6-201ENST00000265164 NOS1P29475 1434 aa29.79■■■□□ 2.36
CASP6-201ENST00000265164 TET3O43151 1660 aa29.78■■■□□ 2.36
CASP6-201ENST00000265164 SCAF11Q99590 1463 aaKnown RBP29.76■■■□□ 2.35
CASP6-201ENST00000265164 KDM5AP29375 1690 aaKnown RBP29.75■■■□□ 2.35
CASP6-201ENST00000265164 GCC2Q8IWJ2 1684 aa29.75■■■□□ 2.35
CASP6-201ENST00000265164 STRCP1A6NGW2 1772 aa29.75■■■□□ 2.35
CASP6-201ENST00000265164 CPS1P31327 1500 aa29.75■■■□□ 2.35
CASP6-201ENST00000265164 IDI1Q13907 227 aa29.75■■■□□ 2.35
CASP6-201ENST00000265164 LTKP29376 864 aa29.74■■■□□ 2.35
CASP6-201ENST00000265164 RPRD2Q5VT52 1461 aaKnown RBP29.72■■■□□ 2.35
CASP6-201ENST00000265164 TXNDC2Q86VQ3 553 aa29.7■■■□□ 2.34
CASP6-201ENST00000265164 IQGAP3Q86VI3 1631 aa29.7■■■□□ 2.34
CASP6-201ENST00000265164 E9PCH4 1651 aa29.69■■■□□ 2.34
CASP6-201ENST00000265164 TMEM2Q9UHN6 1383 aa29.69■■■□□ 2.34
CASP6-201ENST00000265164 ADGRB3O60242 1522 aa29.69■■■□□ 2.34
CASP6-201ENST00000265164 UBAP1LF5GYI3 381 aa29.68■■■□□ 2.34
CASP6-201ENST00000265164 STAG3Q9UJ98 1225 aa29.68■■■□□ 2.34
CASP6-201ENST00000265164 MYO5BQ9ULV0 1848 aa29.67■■■□□ 2.34
CASP6-201ENST00000265164 EID1Q9Y6B2 187 aa29.62■■■□□ 2.33
CASP6-201ENST00000265164 SLC52A1Q9NWF4 448 aa29.61■■■□□ 2.33
CASP6-201ENST00000265164 NUP155O75694 1391 aa29.59■■■□□ 2.33
CASP6-201ENST00000265164 LRRC7Q96NW7 1537 aa29.58■■■□□ 2.33
CASP6-201ENST00000265164 TMEM131LA2VDJ0 1609 aa29.58■■■□□ 2.33
CASP6-201ENST00000265164 ALKQ9UM73 1620 aa29.55■■■□□ 2.32
CASP6-201ENST00000265164 XIRP1Q702N8 1843 aaKnown RBP29.51■■■□□ 2.32
CASP6-201ENST00000265164 ZFYVE9O95405 1425 aa29.51■■■□□ 2.31
CASP6-201ENST00000265164 NAIPQ13075 1403 aa29.5■■■□□ 2.31
CASP6-201ENST00000265164 PIP4K2BP78356 416 aa29.5■■■□□ 2.31
CASP6-201ENST00000265164 TOM1O60784 492 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms