RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CHMP4CQ96CF2 233 aa21.63■■□□□ 1.05
NOTCH3-201ENST00000263388 ATP6V1DQ9Y5K8 247 aa21.63■■□□□ 1.05
NOTCH3-201ENST00000263388 TPM3P06753 285 aa21.62■■□□□ 1.05
NOTCH3-201ENST00000263388 MLECQ14165 292 aa21.62■■□□□ 1.05
NOTCH3-201ENST00000263388 GGT6Q6P531 493 aa21.62■■□□□ 1.05
NOTCH3-201ENST00000263388 RASSF8Q8NHQ8 419 aa21.62■■□□□ 1.05
NOTCH3-201ENST00000263388 CENPQQ7L2Z9 268 aaPredicted RBP21.61■■□□□ 1.05
NOTCH3-201ENST00000263388 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.61■■□□□ 1.05
NOTCH3-201ENST00000263388 UACAQ9BZF9 1416 aa21.61■■□□□ 1.05
NOTCH3-201ENST00000263388 SKOR2Q2VWA4 1001 aaPredicted RBP21.6■■□□□ 1.05
NOTCH3-201ENST00000263388 HSP90AA2PQ14568 343 aaPredicted RBP21.6■■□□□ 1.05
NOTCH3-201ENST00000263388 RSPH6AQ9H0K4 717 aa21.6■■□□□ 1.05
NOTCH3-201ENST00000263388 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
NOTCH3-201ENST00000263388 TSR1Q2NL82 804 aaKnown RBP21.58■■□□□ 1.05
NOTCH3-201ENST00000263388 CSB-PGBD3P0DP91 1061 aa21.58■■□□□ 1.04
NOTCH3-201ENST00000263388 CEP89Q96ST8 783 aa21.58■■□□□ 1.04
NOTCH3-201ENST00000263388 ZNF330Q9Y3S2 320 aaPredicted RBP21.57■■□□□ 1.04
NOTCH3-201ENST00000263388 SLC4A10Q6U841 1118 aa21.56■■□□□ 1.04
NOTCH3-201ENST00000263388 GOLGA6L19H0YKK7 550 aa21.56■■□□□ 1.04
NOTCH3-201ENST00000263388 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
NOTCH3-201ENST00000263388 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
NOTCH3-201ENST00000263388 SF3A1Q15459 793 aaKnown RBP21.56■■□□□ 1.04
NOTCH3-201ENST00000263388 RSPH4AQ5TD94 716 aa21.56■■□□□ 1.04
NOTCH3-201ENST00000263388 TSHZ2Q9NRE2 1034 aa21.56■■□□□ 1.04
NOTCH3-201ENST00000263388 GPS2Q13227 327 aa21.55■■□□□ 1.04
NOTCH3-201ENST00000263388 MYBBP1AQ9BQG0 1328 aaKnown RBP21.55■■□□□ 1.04
NOTCH3-201ENST00000263388 H3BQV1 296 aa21.55■■□□□ 1.04
NOTCH3-201ENST00000263388 IFFO2Q5TF58 517 aa21.55■■□□□ 1.04
NOTCH3-201ENST00000263388 CCDC70Q6NSX1 233 aa21.54■■□□□ 1.04
NOTCH3-201ENST00000263388 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
NOTCH3-201ENST00000263388 EFCAB2Q5VUJ9 269 aa21.53■■□□□ 1.04
NOTCH3-201ENST00000263388 CREBRFQ8IUR6 639 aa21.52■■□□□ 1.04
NOTCH3-201ENST00000263388 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
NOTCH3-201ENST00000263388 CCDC144AA2RUR9 1427 aa21.52■■□□□ 1.04
NOTCH3-201ENST00000263388 TPM1P09493 284 aa21.51■■□□□ 1.03
NOTCH3-201ENST00000263388 CCDC146Q8IYE0 955 aa21.51■■□□□ 1.03
NOTCH3-201ENST00000263388 TPD52L1Q16890 204 aaPredicted RBP21.51■■□□□ 1.03
NOTCH3-201ENST00000263388 LRRFIP1Q32MZ4 808 aaKnown RBP21.51■■□□□ 1.03
NOTCH3-201ENST00000263388 ZBED9Q6R2W3 1325 aa21.5■■□□□ 1.03
NOTCH3-201ENST00000263388 RAPGEF2Q9Y4G8 1499 aa21.49■■□□□ 1.03
NOTCH3-201ENST00000263388 CLUAP1Q96AJ1 413 aa21.49■■□□□ 1.03
NOTCH3-201ENST00000263388 TPM2P07951 284 aa21.48■■□□□ 1.03
NOTCH3-201ENST00000263388 AMPHP49418 695 aa21.47■■□□□ 1.03
NOTCH3-201ENST00000263388 NOL8Q76FK4 1167 aaKnown RBP21.47■■□□□ 1.03
NOTCH3-201ENST00000263388 FAM184AQ8NB25 1140 aa21.47■■□□□ 1.03
NOTCH3-201ENST00000263388 EID1Q9Y6B2 187 aa21.47■■□□□ 1.03
NOTCH3-201ENST00000263388 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
NOTCH3-201ENST00000263388 CGNL1Q0VF96 1302 aa21.46■■□□□ 1.03
NOTCH3-201ENST00000263388 GSE1Q14687 1217 aa21.46■■□□□ 1.03
NOTCH3-201ENST00000263388 FOXD4L1Q9NU39 408 aa21.46■■□□□ 1.03
NOTCH3-201ENST00000263388 E9PSI1 815 aa21.46■■□□□ 1.03
NOTCH3-201ENST00000263388 DDX49Q9Y6V7 483 aaKnown RBP21.46■■□□□ 1.03
NOTCH3-201ENST00000263388 L3MBTL2Q969R5 705 aa21.45■■□□□ 1.02
NOTCH3-201ENST00000263388 ROCK1Q13464 1354 aa21.45■■□□□ 1.02
NOTCH3-201ENST00000263388 G3V3G9 751 aa21.45■■□□□ 1.02
NOTCH3-201ENST00000263388 PES1O00541 588 aaKnown RBP21.45■■□□□ 1.02
NOTCH3-201ENST00000263388 DCAF8Q5TAQ9 597 aa21.45■■□□□ 1.02
NOTCH3-201ENST00000263388 CUX1P39880 1505 aa21.44■■□□□ 1.02
NOTCH3-201ENST00000263388 BECN2A8MW95 431 aa21.44■■□□□ 1.02
NOTCH3-201ENST00000263388 REC8O95072 547 aa21.44■■□□□ 1.02
NOTCH3-201ENST00000263388 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
NOTCH3-201ENST00000263388 NGDNQ8NEJ9 315 aaKnown RBP21.43■■□□□ 1.02
NOTCH3-201ENST00000263388 AKAP17AQ02040 695 aaKnown RBP21.42■■□□□ 1.02
NOTCH3-201ENST00000263388 ANKRD45Q5TZF3 282 aa21.42■■□□□ 1.02
NOTCH3-201ENST00000263388 RILPL2Q969X0 211 aa21.42■■□□□ 1.02
NOTCH3-201ENST00000263388 TEX35Q5T0J7 233 aa21.42■■□□□ 1.02
NOTCH3-201ENST00000263388 MARCH6O60337 910 aa21.41■■□□□ 1.02
NOTCH3-201ENST00000263388 FRAT2O75474 233 aaPredicted RBP21.41■■□□□ 1.02
NOTCH3-201ENST00000263388 HOOK1Q9UJC3 728 aaKnown RBP21.4■■□□□ 1.02
NOTCH3-201ENST00000263388 RUFY2Q8WXA3 655 aa21.4■■□□□ 1.02
NOTCH3-201ENST00000263388 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.02
NOTCH3-201ENST00000263388 PDE4AP27815 886 aa21.39■■□□□ 1.01
NOTCH3-201ENST00000263388 ZKSCAN2Q63HK3 967 aa21.39■■□□□ 1.01
NOTCH3-201ENST00000263388 WASHC2CQ9Y4E1 1318 aa21.39■■□□□ 1.01
NOTCH3-201ENST00000263388 KIF3BO15066 747 aa21.39■■□□□ 1.01
NOTCH3-201ENST00000263388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
NOTCH3-201ENST00000263388 TOMM22Q9NS69 142 aa21.39■■□□□ 1.01
NOTCH3-201ENST00000263388 FOXD4L5Q5VV16 416 aaPredicted RBP21.38■■□□□ 1.01
NOTCH3-201ENST00000263388 FOXD4L4Q8WXT5 416 aaPredicted RBP21.38■■□□□ 1.01
NOTCH3-201ENST00000263388 VPS53Q5VIR6 699 aa21.38■■□□□ 1.01
NOTCH3-201ENST00000263388 USP47Q96K76 1375 aa21.37■■□□□ 1.01
NOTCH3-201ENST00000263388 RRP12Q5JTH9 1297 aaKnown RBP21.37■■□□□ 1.01
NOTCH3-201ENST00000263388 NGEFQ8N5V2 710 aa21.37■■□□□ 1.01
NOTCH3-201ENST00000263388 CPLX2Q6PUV4 134 aaKnown RBP21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 CCAR2Q8N163 923 aaKnown RBP21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 DIAPH3Q9NSV4 1193 aa21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 EVC2Q86UK5 1308 aa21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 IPO7O95373 1038 aaKnown RBP21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 ANKRD20A12PQ8NF67 263 aa21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 NOM1Q5C9Z4 860 aaKnown RBP21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 ZNF771Q7L3S4 317 aaPredicted RBP21.36■■□□□ 1.01
NOTCH3-201ENST00000263388 SYNE3Q6ZMZ3 975 aa21.35■■□□□ 1.01
NOTCH3-201ENST00000263388 PDE4CQ08493 712 aa21.35■■□□□ 1.01
NOTCH3-201ENST00000263388 DDX19BQ9UMR2 479 aa21.34■■□□□ 1.01
NOTCH3-201ENST00000263388 ZKSCAN1P17029 563 aaPredicted RBP21.34■■□□□ 1.01
NOTCH3-201ENST00000263388 HNRNPMP52272 730 aaKnown RBP eCLIP21.33■■□□□ 1.01
NOTCH3-201ENST00000263388 PANK3Q9H999 370 aa21.33■■□□□ 1.01
NOTCH3-201ENST00000263388 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1
NOTCH3-201ENST00000263388 C1orf141Q5JVX7 400 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms