RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.26■■■■□ 3.4
SCN1B-201ENST00000262631 MROH1Q8NDA8 1641 aa36.25■■■■□ 3.39
SCN1B-201ENST00000262631 DEPDC5O75140 1603 aa36.25■■■■□ 3.39
SCN1B-201ENST00000262631 RNF17Q9BXT8 1623 aaKnown RBP36.25■■■■□ 3.39
SCN1B-201ENST00000262631 TRIM52Q96A61 297 aa36.24■■■■□ 3.39
SCN1B-201ENST00000262631 UNC13BO14795 1591 aa36.24■■■■□ 3.39
SCN1B-201ENST00000262631 MLECQ14165 292 aa36.23■■■■□ 3.39
SCN1B-201ENST00000262631 NUP155O75694 1391 aa36.21■■■■□ 3.39
SCN1B-201ENST00000262631 PRDM15P57071 1507 aaPredicted RBP36.2■■■■□ 3.39
SCN1B-201ENST00000262631 KDM5DQ9BY66 1539 aa36.14■■■■□ 3.38
SCN1B-201ENST00000262631 PZPP20742 1482 aa36.13■■■■□ 3.37
SCN1B-201ENST00000262631 VWDEQ8N2E2 1590 aa36.13■■■■□ 3.37
SCN1B-201ENST00000262631 KANK1Q14678 1352 aa36.1■■■■□ 3.37
SCN1B-201ENST00000262631 ACIN1Q9UKV3 1341 aaKnown RBP36.1■■■■□ 3.37
SCN1B-201ENST00000262631 FAM135AQ9P2D6 1515 aa36.1■■■■□ 3.37
SCN1B-201ENST00000262631 IQGAP3Q86VI3 1631 aa36.09■■■■□ 3.37
SCN1B-201ENST00000262631 WASHC2CQ9Y4E1 1318 aa36.07■■■■□ 3.37
SCN1B-201ENST00000262631 MPHOSPH9Q99550 1183 aa36.06■■■■□ 3.36
SCN1B-201ENST00000262631 ABCC3O15438 1527 aa36.05■■■■□ 3.36
SCN1B-201ENST00000262631 SLC4A1APQ9BWU0 796 aaKnown RBP36.05■■■■□ 3.36
SCN1B-201ENST00000262631 PPP6R1Q9UPN7 881 aa36.03■■■■□ 3.36
SCN1B-201ENST00000262631 DHX57Q6P158 1386 aaKnown RBP36.02■■■■□ 3.36
SCN1B-201ENST00000262631 LMTK2Q8IWU2 1503 aa36.01■■■■□ 3.35
SCN1B-201ENST00000262631 CEP152O94986 1710 aa36.01■■■■□ 3.35
SCN1B-201ENST00000262631 PKD2Q13563 968 aa35.96■■■■□ 3.35
SCN1B-201ENST00000262631 ZC3H13Q5T200 1668 aaKnown RBP35.95■■■■□ 3.35
SCN1B-201ENST00000262631 FOXD1Q16676 465 aa35.95■■■■□ 3.35
SCN1B-201ENST00000262631 CLTCQ00610 1675 aaKnown RBP35.95■■■■□ 3.35
SCN1B-201ENST00000262631 TET3O43151 1660 aa35.94■■■■□ 3.34
SCN1B-201ENST00000262631 ESF1Q9H501 851 aaKnown RBP35.93■■■■□ 3.34
SCN1B-201ENST00000262631 EFCAB6Q5THR3 1501 aa35.93■■■■□ 3.34
SCN1B-201ENST00000262631 ADAMTSL3P82987 1691 aa35.92■■■■□ 3.34
SCN1B-201ENST00000262631 CAMSAP1Q5T5Y3 1602 aa35.91■■■■□ 3.34
SCN1B-201ENST00000262631 MADDQ8WXG6 1647 aa35.9■■■■□ 3.34
SCN1B-201ENST00000262631 FER1L4A9Z1Z3 1794 aa35.89■■■■□ 3.34
SCN1B-201ENST00000262631 NPATQ14207 1427 aa35.89■■■■□ 3.34
SCN1B-201ENST00000262631 CNTLNQ9NXG0 1405 aa35.89■■■■□ 3.34
SCN1B-201ENST00000262631 E9PCH4 1651 aa35.87■■■■□ 3.33
SCN1B-201ENST00000262631 ZMYM3Q14202 1370 aa35.86■■■■□ 3.33
SCN1B-201ENST00000262631 ARHGAP31Q2M1Z3 1444 aa35.84■■■■□ 3.33
SCN1B-201ENST00000262631 CCER1Q8TC90 406 aaPredicted RBP35.81■■■■□ 3.32
SCN1B-201ENST00000262631 RIMS1Q86UR5 1692 aaKnown RBP35.79■■■■□ 3.32
SCN1B-201ENST00000262631 RPRD2Q5VT52 1461 aaKnown RBP35.79■■■■□ 3.32
SCN1B-201ENST00000262631 MROH2AA6NES4 1674 aa35.78■■■■□ 3.32
SCN1B-201ENST00000262631 CEBPAP49715 358 aaPredicted RBP35.78■■■■□ 3.32
SCN1B-201ENST00000262631 FBXO31Q5XUX0 539 aaPredicted RBP35.78■■■■□ 3.32
SCN1B-201ENST00000262631 KDM4FA0A1W2PPD8 638 aa35.76■■■■□ 3.32
SCN1B-201ENST00000262631 PLA2R1Q13018 1463 aa35.75■■■■□ 3.31
SCN1B-201ENST00000262631 ANKRD30BQ9BXX2 1392 aa35.74■■■■□ 3.31
SCN1B-201ENST00000262631 PTPRTO14522 1441 aa35.72■■■■□ 3.31
SCN1B-201ENST00000262631 C3P01024 1663 aa35.72■■■■□ 3.31
SCN1B-201ENST00000262631 PLPPR3Q6T4P5 718 aa35.72■■■■□ 3.31
SCN1B-201ENST00000262631 NOS1P29475 1434 aa35.69■■■■□ 3.3
SCN1B-201ENST00000262631 ERVK-7P63135 1459 aa35.69■■■■□ 3.3
SCN1B-201ENST00000262631 CFAP65Q6ZU64 1925 aaKnown RBP35.69■■■■□ 3.3
SCN1B-201ENST00000262631 PTPRMP28827 1452 aa35.67■■■■□ 3.3
SCN1B-201ENST00000262631 PREX1Q8TCU6 1659 aa35.67■■■■□ 3.3
SCN1B-201ENST00000262631 SPHKAPQ2M3C7 1700 aa35.65■■■■□ 3.3
SCN1B-201ENST00000262631 SPATA31D1Q6ZQQ2 1576 aa35.64■■■■□ 3.3
SCN1B-201ENST00000262631 TRPM2O94759 1503 aa35.64■■■■□ 3.3
SCN1B-201ENST00000262631 SYNMO15061 1565 aa35.63■■■■□ 3.29
SCN1B-201ENST00000262631 SIN3AQ96ST3 1273 aa35.62■■■■□ 3.29
SCN1B-201ENST00000262631 UGGT1Q9NYU2 1555 aa35.61■■■■□ 3.29
SCN1B-201ENST00000262631 CLSPNQ9HAW4 1339 aa35.59■■■■□ 3.29
SCN1B-201ENST00000262631 CCDC144AA2RUR9 1427 aa35.57■■■■□ 3.28
SCN1B-201ENST00000262631 TNRQ92752 1358 aa35.56■■■■□ 3.28
SCN1B-201ENST00000262631 CLTCL1P53675 1640 aa35.54■■■■□ 3.28
SCN1B-201ENST00000262631 NEUROD1Q13562 356 aa35.52■■■■□ 3.28
SCN1B-201ENST00000262631 IDI1Q13907 227 aa35.52■■■■□ 3.28
SCN1B-201ENST00000262631 PIK3C2BO00750 1634 aa35.5■■■■□ 3.27
SCN1B-201ENST00000262631 SLC52A1Q9NWF4 448 aa35.49■■■■□ 3.27
SCN1B-201ENST00000262631 NLRP1Q9C000 1473 aa35.39■■■■□ 3.26
SCN1B-201ENST00000262631 SPATA31E1Q6ZUB1 1445 aa35.38■■■■□ 3.25
SCN1B-201ENST00000262631 MYO3AQ8NEV4 1616 aa35.38■■■■□ 3.25
SCN1B-201ENST00000262631 CHGAP10645 457 aaKnown RBP35.37■■■■□ 3.25
SCN1B-201ENST00000262631 RGL3Q3MIN7 710 aa35.34■■■■□ 3.25
SCN1B-201ENST00000262631 ADGRB3O60242 1522 aa35.34■■■■□ 3.25
SCN1B-201ENST00000262631 TMEM131LA2VDJ0 1609 aa35.33■■■■□ 3.25
SCN1B-201ENST00000262631 KIF1BO60333 1816 aa35.31■■■■□ 3.24
SCN1B-201ENST00000262631 SETD1BQ9UPS6 1966 aaKnown RBP35.3■■■■□ 3.24
SCN1B-201ENST00000262631 STAG3Q9UJ98 1225 aa35.3■■■■□ 3.24
SCN1B-201ENST00000262631 A2ML1A8K2U0 1454 aa35.29■■■■□ 3.24
SCN1B-201ENST00000262631 CEP170BQ9Y4F5 1589 aaPredicted RBP35.28■■■■□ 3.24
SCN1B-201ENST00000262631 UHRF1BP1Q6BDS2 1440 aa35.27■■■■□ 3.24
SCN1B-201ENST00000262631 NEURL4Q96JN8 1562 aa35.27■■■■□ 3.24
SCN1B-201ENST00000262631 L3MBTL2Q969R5 705 aa35.26■■■■□ 3.23
SCN1B-201ENST00000262631 TONSLQ96HA7 1378 aa35.26■■■■□ 3.23
SCN1B-201ENST00000262631 UBR1Q8IWV7 1749 aa35.25■■■■□ 3.23
SCN1B-201ENST00000262631 MYO5BQ9ULV0 1848 aa35.24■■■■□ 3.23
SCN1B-201ENST00000262631 ZNF326Q5BKZ1 582 aaKnown RBP35.24■■■■□ 3.23
SCN1B-201ENST00000262631 ZNF142P52746 1687 aaPredicted RBP35.22■■■■□ 3.23
SCN1B-201ENST00000262631 KDM5AP29375 1690 aaKnown RBP35.21■■■■□ 3.23
SCN1B-201ENST00000262631 AEBP2Q6ZN18 517 aaPredicted RBP35.19■■■■□ 3.22
SCN1B-201ENST00000262631 DCAF11Q8TEB1 546 aa35.17■■■■□ 3.22
SCN1B-201ENST00000262631 THEMISQ8N1K5 641 aaPredicted RBP35.15■■■■□ 3.22
SCN1B-201ENST00000262631 TIMELESSQ9UNS1 1208 aa35.15■■■■□ 3.22
SCN1B-201ENST00000262631 TMEM2Q9UHN6 1383 aa35.14■■■■□ 3.22
SCN1B-201ENST00000262631 NEXMIFQ5QGS0 1516 aa35.14■■■■□ 3.22
SCN1B-201ENST00000262631 NUTM2DQ5VT03 806 aaPredicted RBP35.13■■■■□ 3.21
SCN1B-201ENST00000262631 KDM2AQ9Y2K7 1162 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms