RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MROH1Q8NDA8 1641 aa24.88■■□□□ 1.57
CHCHD3-201ENST00000262570 ADAMTSL3P82987 1691 aa24.88■■□□□ 1.57
CHCHD3-201ENST00000262570 DEPDC5O75140 1603 aa24.87■■□□□ 1.57
CHCHD3-201ENST00000262570 KDM4FA0A1W2PPD8 638 aa24.87■■□□□ 1.57
CHCHD3-201ENST00000262570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.86■■□□□ 1.571e-7■■□□□ 12
CHCHD3-201ENST00000262570 PRDM15P57071 1507 aaPredicted RBP24.85■■□□□ 1.57
CHCHD3-201ENST00000262570 WASHC2CQ9Y4E1 1318 aa24.84■■□□□ 1.57
CHCHD3-201ENST00000262570 RAB3GAP2Q9H2M9 1393 aa24.83■■□□□ 1.57
CHCHD3-201ENST00000262570 ESF1Q9H501 851 aaKnown RBP24.83■■□□□ 1.57
CHCHD3-201ENST00000262570 KANK1Q14678 1352 aa24.82■■□□□ 1.56
CHCHD3-201ENST00000262570 UNC13BO14795 1591 aa24.82■■□□□ 1.56
CHCHD3-201ENST00000262570 FAM135AQ9P2D6 1515 aa24.82■■□□□ 1.56
CHCHD3-201ENST00000262570 MADDQ8WXG6 1647 aa24.82■■□□□ 1.56
CHCHD3-201ENST00000262570 KDM5DQ9BY66 1539 aa24.81■■□□□ 1.56
CHCHD3-201ENST00000262570 NUP155O75694 1391 aa24.81■■□□□ 1.56
CHCHD3-201ENST00000262570 CNTLNQ9NXG0 1405 aa24.81■■□□□ 1.56
CHCHD3-201ENST00000262570 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
CHCHD3-201ENST00000262570 HRCP23327 699 aa24.8■■□□□ 1.56
CHCHD3-201ENST00000262570 PCGF6Q9BYE7 350 aa24.8■■□□□ 1.56
CHCHD3-201ENST00000262570 FER1L4A9Z1Z3 1794 aa24.78■■□□□ 1.56
CHCHD3-201ENST00000262570 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
CHCHD3-201ENST00000262570 ABCC3O15438 1527 aa24.78■■□□□ 1.56
CHCHD3-201ENST00000262570 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
CHCHD3-201ENST00000262570 LMTK2Q8IWU2 1503 aa24.75■■□□□ 1.55
CHCHD3-201ENST00000262570 ZMYM3Q14202 1370 aa24.75■■□□□ 1.55
CHCHD3-201ENST00000262570 CLTCQ00610 1675 aaKnown RBP24.74■■□□□ 1.55
CHCHD3-201ENST00000262570 ZC3H13Q5T200 1668 aaKnown RBP24.74■■□□□ 1.55
CHCHD3-201ENST00000262570 RIMS1Q86UR5 1692 aaKnown RBP24.73■■□□□ 1.55
CHCHD3-201ENST00000262570 PTPRMP28827 1452 aa24.72■■□□□ 1.55
CHCHD3-201ENST00000262570 IQGAP3Q86VI3 1631 aa24.72■■□□□ 1.55
CHCHD3-201ENST00000262570 CEP152O94986 1710 aa24.71■■□□□ 1.55
CHCHD3-201ENST00000262570 MROH2AA6NES4 1674 aa24.7■■□□□ 1.55
CHCHD3-201ENST00000262570 CEBPAP49715 358 aaPredicted RBP24.7■■□□□ 1.54
CHCHD3-201ENST00000262570 ARHGAP31Q2M1Z3 1444 aa24.68■■□□□ 1.54
CHCHD3-201ENST00000262570 PZPP20742 1482 aa24.68■■□□□ 1.54
CHCHD3-201ENST00000262570 CAMSAP1Q5T5Y3 1602 aa24.66■■□□□ 1.54
CHCHD3-201ENST00000262570 SLC4A1APQ9BWU0 796 aaKnown RBP24.66■■□□□ 1.54
CHCHD3-201ENST00000262570 NPATQ14207 1427 aa24.66■■□□□ 1.54
CHCHD3-201ENST00000262570 TET3O43151 1660 aa24.65■■□□□ 1.54
CHCHD3-201ENST00000262570 EFCAB6Q5THR3 1501 aa24.65■■□□□ 1.54
CHCHD3-201ENST00000262570 C3P01024 1663 aa24.64■■□□□ 1.54
CHCHD3-201ENST00000262570 MPHOSPH9Q99550 1183 aa24.64■■□□□ 1.54
CHCHD3-201ENST00000262570 PLPPR3Q6T4P5 718 aa24.63■■□□□ 1.53
CHCHD3-201ENST00000262570 FBXO31Q5XUX0 539 aaPredicted RBP24.63■■□□□ 1.53
CHCHD3-201ENST00000262570 RPRD2Q5VT52 1461 aaKnown RBP24.61■■□□□ 1.53
CHCHD3-201ENST00000262570 PKD2Q13563 968 aa24.6■■□□□ 1.53
CHCHD3-201ENST00000262570 E9PCH4 1651 aa24.57■■□□□ 1.52
CHCHD3-201ENST00000262570 ERVK-7P63135 1459 aa24.55■■□□□ 1.52
CHCHD3-201ENST00000262570 SPATA31D1Q6ZQQ2 1576 aa24.55■■□□□ 1.52
CHCHD3-201ENST00000262570 NOS1P29475 1434 aa24.54■■□□□ 1.52
CHCHD3-201ENST00000262570 FOXD1Q16676 465 aa24.53■■□□□ 1.52
CHCHD3-201ENST00000262570 PREX1Q8TCU6 1659 aa24.52■■□□□ 1.52
CHCHD3-201ENST00000262570 TNRQ92752 1358 aa24.52■■□□□ 1.52
CHCHD3-201ENST00000262570 CFAP65Q6ZU64 1925 aaKnown RBP24.51■■□□□ 1.51
CHCHD3-201ENST00000262570 PTPRTO14522 1441 aa24.5■■□□□ 1.51
CHCHD3-201ENST00000262570 SETD1BQ9UPS6 1966 aaKnown RBP24.48■■□□□ 1.51
CHCHD3-201ENST00000262570 PLA2R1Q13018 1463 aa24.47■■□□□ 1.51
CHCHD3-201ENST00000262570 SYNMO15061 1565 aa24.46■■□□□ 1.51
CHCHD3-201ENST00000262570 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
CHCHD3-201ENST00000262570 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
CHCHD3-201ENST00000262570 IDI1Q13907 227 aa24.43■■□□□ 1.5
CHCHD3-201ENST00000262570 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
CHCHD3-201ENST00000262570 NLRP1Q9C000 1473 aa24.43■■□□□ 1.5
CHCHD3-201ENST00000262570 SPHKAPQ2M3C7 1700 aa24.42■■□□□ 1.5
CHCHD3-201ENST00000262570 TRPM2O94759 1503 aa24.42■■□□□ 1.5
CHCHD3-201ENST00000262570 UHRF1BP1Q6BDS2 1440 aa24.42■■□□□ 1.5
CHCHD3-201ENST00000262570 ANKRD30BQ9BXX2 1392 aa24.41■■□□□ 1.5
CHCHD3-201ENST00000262570 MYO3AQ8NEV4 1616 aa24.4■■□□□ 1.5
CHCHD3-201ENST00000262570 UGGT1Q9NYU2 1555 aa24.38■■□□□ 1.49
CHCHD3-201ENST00000262570 A2ML1A8K2U0 1454 aa24.37■■□□□ 1.49
CHCHD3-201ENST00000262570 PIK3C2BO00750 1634 aa24.37■■□□□ 1.49
CHCHD3-201ENST00000262570 CEP170BQ9Y4F5 1589 aaPredicted RBP24.35■■□□□ 1.49
CHCHD3-201ENST00000262570 CCDC144AA2RUR9 1427 aa24.35■■□□□ 1.49
CHCHD3-201ENST00000262570 LMTK3Q96Q04 1460 aa24.34■■□□□ 1.49
CHCHD3-201ENST00000262570 ZNF142P52746 1687 aaPredicted RBP24.33■■□□□ 1.49
CHCHD3-201ENST00000262570 CLTCL1P53675 1640 aa24.33■■□□□ 1.48
CHCHD3-201ENST00000262570 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
CHCHD3-201ENST00000262570 THEMISQ8N1K5 641 aaPredicted RBP24.3■■□□□ 1.48
CHCHD3-201ENST00000262570 CHGAP10645 457 aaKnown RBP24.28■■□□□ 1.48
CHCHD3-201ENST00000262570 ADGRB3O60242 1522 aa24.28■■□□□ 1.48
CHCHD3-201ENST00000262570 TMEM131LA2VDJ0 1609 aa24.27■■□□□ 1.48
CHCHD3-201ENST00000262570 UBR1Q8IWV7 1749 aa24.27■■□□□ 1.48
CHCHD3-201ENST00000262570 KDM5AP29375 1690 aaKnown RBP24.27■■□□□ 1.48
CHCHD3-201ENST00000262570 HSPA2P54652 639 aa24.26■■□□□ 1.47
CHCHD3-201ENST00000262570 SPATA31E1Q6ZUB1 1445 aa24.23■■□□□ 1.47
CHCHD3-201ENST00000262570 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
CHCHD3-201ENST00000262570 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
CHCHD3-201ENST00000262570 CCER1Q8TC90 406 aaPredicted RBP24.21■■□□□ 1.47
CHCHD3-201ENST00000262570 KIF1BO60333 1816 aa24.21■■□□□ 1.47
CHCHD3-201ENST00000262570 CLSPNQ9HAW4 1339 aa24.21■■□□□ 1.47
CHCHD3-201ENST00000262570 ARHGAP23Q9P227 1491 aa24.19■■□□□ 1.46
CHCHD3-201ENST00000262570 SLIT1O75093 1534 aa24.19■■□□□ 1.46
CHCHD3-201ENST00000262570 ZNF326Q5BKZ1 582 aaKnown RBP24.19■■□□□ 1.46
CHCHD3-201ENST00000262570 NEURL4Q96JN8 1562 aa24.19■■□□□ 1.46
CHCHD3-201ENST00000262570 RGL3Q3MIN7 710 aa24.18■■□□□ 1.46
CHCHD3-201ENST00000262570 MYO5BQ9ULV0 1848 aa24.18■■□□□ 1.46
CHCHD3-201ENST00000262570 NEUROD1Q13562 356 aa24.16■■□□□ 1.46
CHCHD3-201ENST00000262570 ANKLE2Q86XL3 938 aa24.16■■□□□ 1.46
CHCHD3-201ENST00000262570 ZFYVE9O95405 1425 aa24.16■■□□□ 1.46
CHCHD3-201ENST00000262570 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms