RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 DHX57Q6P158 1386 aaKnown RBP40.63■■■■■ 4.09
SMARCD3-201ENST00000262188 GGT6Q6P531 493 aa40.62■■■■■ 4.09
SMARCD3-201ENST00000262188 UNC13BO14795 1591 aa40.61■■■■■ 4.09
SMARCD3-201ENST00000262188 REREQ9P2R6 1566 aa40.6■■■■■ 4.09
SMARCD3-201ENST00000262188 MROH1Q8NDA8 1641 aa40.58■■■■■ 4.09
SMARCD3-201ENST00000262188 PZPP20742 1482 aa40.57■■■■■ 4.08
SMARCD3-201ENST00000262188 DEPDC5O75140 1603 aa40.56■■■■■ 4.08
SMARCD3-201ENST00000262188 CCER1Q8TC90 406 aaPredicted RBP40.56■■■■■ 4.08
SMARCD3-201ENST00000262188 MLECQ14165 292 aa40.55■■■■■ 4.08
SMARCD3-201ENST00000262188 ARID4BQ4LE39 1312 aaPredicted RBP40.54■■■■■ 4.08
SMARCD3-201ENST00000262188 MPHOSPH9Q99550 1183 aa40.54■■■■■ 4.08
SMARCD3-201ENST00000262188 RNF17Q9BXT8 1623 aaKnown RBP40.53■■■■■ 4.08
SMARCD3-201ENST00000262188 BCORL1Q5H9F3 1711 aa40.53■■■■■ 4.08
SMARCD3-201ENST00000262188 SLC4A1APQ9BWU0 796 aaKnown RBP40.52■■■■■ 4.08
SMARCD3-201ENST00000262188 FOXD1Q16676 465 aa40.5■■■■■ 4.07
SMARCD3-201ENST00000262188 AGLP35573 1532 aa40.5■■■■■ 4.07
SMARCD3-201ENST00000262188 PRDM15P57071 1507 aaPredicted RBP40.49■■■■■ 4.07
SMARCD3-201ENST00000262188 KDM5DQ9BY66 1539 aa40.49■■■■■ 4.07
SMARCD3-201ENST00000262188 FAM135AQ9P2D6 1515 aa40.49■■■■■ 4.07
SMARCD3-201ENST00000262188 IQGAP3Q86VI3 1631 aa40.45■■■■■ 4.07
SMARCD3-201ENST00000262188 VWDEQ8N2E2 1590 aa40.41■■■■■ 4.06
SMARCD3-201ENST00000262188 KANK1Q14678 1352 aa40.41■■■■■ 4.06
SMARCD3-201ENST00000262188 PKD2Q13563 968 aa40.4■■■■■ 4.06
SMARCD3-201ENST00000262188 CEP152O94986 1710 aa40.4■■■■■ 4.06
SMARCD3-201ENST00000262188 ACIN1Q9UKV3 1341 aaKnown RBP40.38■■■■■ 4.05
SMARCD3-201ENST00000262188 WASHC2CQ9Y4E1 1318 aa40.36■■■■■ 4.05
SMARCD3-201ENST00000262188 ABCC3O15438 1527 aa40.32■■■■■ 4.05
SMARCD3-201ENST00000262188 TET3O43151 1660 aa40.26■■■■■ 4.03
SMARCD3-201ENST00000262188 E9PCH4 1651 aa40.24■■■■■ 4.03
SMARCD3-201ENST00000262188 LMTK2Q8IWU2 1503 aa40.23■■■■■ 4.03
SMARCD3-201ENST00000262188 CLTCQ00610 1675 aaKnown RBP40.23■■■■■ 4.03
SMARCD3-201ENST00000262188 SIN3AQ96ST3 1273 aa40.21■■■■■ 4.03
SMARCD3-201ENST00000262188 EFCAB6Q5THR3 1501 aa40.21■■■■■ 4.03
SMARCD3-201ENST00000262188 CAMSAP1Q5T5Y3 1602 aa40.2■■■■■ 4.03
SMARCD3-201ENST00000262188 ZC3H13Q5T200 1668 aaKnown RBP40.17■■■■■ 4.02
SMARCD3-201ENST00000262188 NPATQ14207 1427 aa40.15■■■■■ 4.02
SMARCD3-201ENST00000262188 ANKRD30BQ9BXX2 1392 aa40.15■■■■■ 4.02
SMARCD3-201ENST00000262188 CFAP65Q6ZU64 1925 aaKnown RBP40.15■■■■■ 4.02
SMARCD3-201ENST00000262188 ESF1Q9H501 851 aaKnown RBP40.14■■■■■ 4.02
SMARCD3-201ENST00000262188 PPP6R1Q9UPN7 881 aa40.14■■■■■ 4.02
SMARCD3-201ENST00000262188 NEUROD1Q13562 356 aa40.12■■■■■ 4.01
SMARCD3-201ENST00000262188 PLA2R1Q13018 1463 aa40.11■■■■■ 4.01
SMARCD3-201ENST00000262188 FER1L4A9Z1Z3 1794 aa40.07■■■■■ 4.01
SMARCD3-201ENST00000262188 FBXO31Q5XUX0 539 aaPredicted RBP40.06■■■■■ 4
SMARCD3-201ENST00000262188 MADDQ8WXG6 1647 aa40.05■■■■■ 4
SMARCD3-201ENST00000262188 CLSPNQ9HAW4 1339 aa40.05■■■■■ 4
SMARCD3-201ENST00000262188 PLPPR3Q6T4P5 718 aa40.04■■■■■ 4
SMARCD3-201ENST00000262188 ZMYM3Q14202 1370 aa40.04■■■■■ 4
SMARCD3-201ENST00000262188 CEBPAP49715 358 aaPredicted RBP40.01■■■■■ 4
SMARCD3-201ENST00000262188 ARHGAP31Q2M1Z3 1444 aa40.01■■■■□ 3.99
SMARCD3-201ENST00000262188 SPHKAPQ2M3C7 1700 aa40■■■■□ 3.99
SMARCD3-201ENST00000262188 ADAMTSL3P82987 1691 aa39.99■■■■□ 3.99
SMARCD3-201ENST00000262188 RPRD2Q5VT52 1461 aaKnown RBP39.98■■■■□ 3.99
SMARCD3-201ENST00000262188 UGGT1Q9NYU2 1555 aa39.97■■■■□ 3.99
SMARCD3-201ENST00000262188 PTPRTO14522 1441 aa39.97■■■■□ 3.99
SMARCD3-201ENST00000262188 CNTLNQ9NXG0 1405 aa39.97■■■■□ 3.99
SMARCD3-201ENST00000262188 RIMS1Q86UR5 1692 aaKnown RBP39.96■■■■□ 3.99
SMARCD3-201ENST00000262188 PREX1Q8TCU6 1659 aa39.93■■■■□ 3.98
SMARCD3-201ENST00000262188 TRPM2O94759 1503 aa39.92■■■■□ 3.98
SMARCD3-201ENST00000262188 CCDC144AA2RUR9 1427 aa39.91■■■■□ 3.98
SMARCD3-201ENST00000262188 MROH2AA6NES4 1674 aa39.91■■■■□ 3.98
SMARCD3-201ENST00000262188 NOS1P29475 1434 aa39.9■■■■□ 3.98
SMARCD3-201ENST00000262188 SYNMO15061 1565 aa39.9■■■■□ 3.98
SMARCD3-201ENST00000262188 ERVK-7P63135 1459 aa39.89■■■■□ 3.98
SMARCD3-201ENST00000262188 C3P01024 1663 aa39.89■■■■□ 3.98
SMARCD3-201ENST00000262188 CLTCL1P53675 1640 aa39.88■■■■□ 3.98
SMARCD3-201ENST00000262188 SPATA31D1Q6ZQQ2 1576 aa39.8■■■■□ 3.96
SMARCD3-201ENST00000262188 KDM4FA0A1W2PPD8 638 aa39.75■■■■□ 3.95
SMARCD3-201ENST00000262188 IDI1Q13907 227 aa39.75■■■■□ 3.95
SMARCD3-201ENST00000262188 RGL3Q3MIN7 710 aa39.75■■■■□ 3.95
SMARCD3-201ENST00000262188 TONSLQ96HA7 1378 aa39.74■■■■□ 3.95
SMARCD3-201ENST00000262188 CHGAP10645 457 aaKnown RBP39.73■■■■□ 3.95
SMARCD3-201ENST00000262188 TNRQ92752 1358 aa39.72■■■■□ 3.95
SMARCD3-201ENST00000262188 PIK3C2BO00750 1634 aa39.72■■■■□ 3.95
SMARCD3-201ENST00000262188 PTPRMP28827 1452 aa39.7■■■■□ 3.95
SMARCD3-201ENST00000262188 L3MBTL2Q969R5 705 aa39.7■■■■□ 3.95
SMARCD3-201ENST00000262188 SPATA31E1Q6ZUB1 1445 aa39.66■■■■□ 3.94
SMARCD3-201ENST00000262188 SLC52A1Q9NWF4 448 aa39.65■■■■□ 3.94
SMARCD3-201ENST00000262188 ZEB1P37275 1124 aaPredicted RBP39.64■■■■□ 3.94
SMARCD3-201ENST00000262188 KIF1BO60333 1816 aa39.63■■■■□ 3.93
SMARCD3-201ENST00000262188 ADGRB3O60242 1522 aa39.58■■■■□ 3.93
SMARCD3-201ENST00000262188 MYO5BQ9ULV0 1848 aa39.57■■■■□ 3.92
SMARCD3-201ENST00000262188 KDM2AQ9Y2K7 1162 aa39.56■■■■□ 3.92
SMARCD3-201ENST00000262188 ZNF326Q5BKZ1 582 aaKnown RBP39.55■■■■□ 3.92
SMARCD3-201ENST00000262188 DCAF11Q8TEB1 546 aa39.55■■■■□ 3.92
SMARCD3-201ENST00000262188 STAG3Q9UJ98 1225 aa39.53■■■■□ 3.92
SMARCD3-201ENST00000262188 TMEM131LA2VDJ0 1609 aa39.53■■■■□ 3.92
SMARCD3-201ENST00000262188 TIMELESSQ9UNS1 1208 aa39.52■■■■□ 3.92
SMARCD3-201ENST00000262188 MYO3AQ8NEV4 1616 aa39.5■■■■□ 3.91
SMARCD3-201ENST00000262188 PPP1R15AO75807 674 aaPredicted RBP39.48■■■■□ 3.91
SMARCD3-201ENST00000262188 NUTM2DQ5VT03 806 aaPredicted RBP39.48■■■■□ 3.91
SMARCD3-201ENST00000262188 A2ML1A8K2U0 1454 aa39.46■■■■□ 3.91
SMARCD3-201ENST00000262188 NLRP1Q9C000 1473 aa39.46■■■■□ 3.91
SMARCD3-201ENST00000262188 NEURL4Q96JN8 1562 aa39.42■■■■□ 3.9
SMARCD3-201ENST00000262188 UBR1Q8IWV7 1749 aa39.42■■■■□ 3.9
SMARCD3-201ENST00000262188 NBPF8Q3BBV2 869 aa39.41■■■■□ 3.9
SMARCD3-201ENST00000262188 SENP3Q9H4L4 574 aaPredicted RBP39.41■■■■□ 3.9
SMARCD3-201ENST00000262188 SCAF1Q9H7N4 1312 aaKnown RBP39.39■■■■□ 3.9
SMARCD3-201ENST00000262188 CEP170BQ9Y4F5 1589 aaPredicted RBP39.37■■■■□ 3.89
SMARCD3-201ENST00000262188 IFT172Q9UG01 1749 aa39.36■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms