RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CTDP1Q9Y5B0 961 aaPredicted RBP21.44■■□□□ 1.02
SORT1-201ENST00000256637 ANKRD30AQ9BXX3 1397 aa21.43■■□□□ 1.02
SORT1-201ENST00000256637 FBXO3Q9UK99 471 aa21.43■■□□□ 1.02
SORT1-201ENST00000256637 MCCP23508 829 aa21.41■■□□□ 1.02
SORT1-201ENST00000256637 CLUAP1Q96AJ1 413 aa21.41■■□□□ 1.02
SORT1-201ENST00000256637 MARCH6O60337 910 aa21.41■■□□□ 1.02
SORT1-201ENST00000256637 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
SORT1-201ENST00000256637 DRC7Q8IY82 874 aa21.4■■□□□ 1.02
SORT1-201ENST00000256637 TTC5Q8N0Z6 440 aa21.4■■□□□ 1.02
SORT1-201ENST00000256637 RASSF8Q8NHQ8 419 aa21.4■■□□□ 1.02
SORT1-201ENST00000256637 KTN1Q86UP2 1357 aaKnown RBP21.39■■□□□ 1.01
SORT1-201ENST00000256637 FYB1O15117 783 aa21.37■■□□□ 1.01
SORT1-201ENST00000256637 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
SORT1-201ENST00000256637 COG3Q96JB2 828 aa21.37■■□□□ 1.01
SORT1-201ENST00000256637 VPS37DQ86XT2 251 aa21.37■■□□□ 1.01
SORT1-201ENST00000256637 FOXD4L1Q9NU39 408 aa21.37■■□□□ 1.01
SORT1-201ENST00000256637 CHMP4BQ9H444 224 aaKnown RBP21.36■■□□□ 1.01
SORT1-201ENST00000256637 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
SORT1-201ENST00000256637 PTPRGP23470 1445 aa21.36■■□□□ 1.01
SORT1-201ENST00000256637 TCERG1O14776 1098 aaKnown RBP21.36■■□□□ 1.01
SORT1-201ENST00000256637 MS4A1P11836 297 aa21.35■■□□□ 1.01
SORT1-201ENST00000256637 EIF3AQ14152 1382 aaKnown RBP21.34■■□□□ 1.01
SORT1-201ENST00000256637 ESCO1Q5FWF5 840 aa21.34■■□□□ 1.01
SORT1-201ENST00000256637 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
SORT1-201ENST00000256637 PLIN1O60240 522 aa21.33■■□□□ 1.01
SORT1-201ENST00000256637 MTMR7Q9Y216 660 aa21.33■■□□□ 1.01
SORT1-201ENST00000256637 FOXD4L5Q5VV16 416 aaPredicted RBP21.33■■□□□ 1
SORT1-201ENST00000256637 FOXD4L4Q8WXT5 416 aaPredicted RBP21.33■■□□□ 1
SORT1-201ENST00000256637 SLC4A3P48751 1232 aa21.32■■□□□ 1
SORT1-201ENST00000256637 GPATCH3Q96I76 525 aa21.32■■□□□ 1
SORT1-201ENST00000256637 SETD5Q9C0A6 1442 aa21.31■■□□□ 1
SORT1-201ENST00000256637 TCEAL9Q9UHQ7 104 aa21.3■■□□□ 1
SORT1-201ENST00000256637 HSCBQ8IWL3 235 aa21.3■■□□□ 1
SORT1-201ENST00000256637 AIMP1Q12904 312 aaKnown RBP21.3■■□□□ 1
SORT1-201ENST00000256637 TEFQ10587 303 aa21.29■■□□□ 1
SORT1-201ENST00000256637 L1TD1Q5T7N2 865 aaKnown RBP21.29■■□□□ 1
SORT1-201ENST00000256637 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
SORT1-201ENST00000256637 NLRP2Q9NX02 1062 aa21.29■■□□□ 1
SORT1-201ENST00000256637 GOLGA6L6A8MZA4 724 aa21.29■■□□□ 1
SORT1-201ENST00000256637 XPCQ01831 940 aaPredicted RBP21.28■■□□□ 1
SORT1-201ENST00000256637 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
SORT1-201ENST00000256637 RBM33Q96EV2 1170 aaKnown RBP21.27■■□□□ 1
SORT1-201ENST00000256637 KDM4AO75164 1064 aa21.27■■□□□ 1
SORT1-201ENST00000256637 NOL10Q9BSC4 688 aaKnown RBP21.27■■□□□ 1
SORT1-201ENST00000256637 IPO8O15397 1037 aaKnown RBP21.27■□□□□ 0.99
SORT1-201ENST00000256637 CALD1Q05682 793 aaKnown RBP21.26■□□□□ 0.99
SORT1-201ENST00000256637 PROSER2Q86WR7 435 aaPredicted RBP21.26■□□□□ 0.99
SORT1-201ENST00000256637 RBM42Q9BTD8 480 aaKnown RBP21.26■□□□□ 0.99
SORT1-201ENST00000256637 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
SORT1-201ENST00000256637 DHX16O60231 1041 aaKnown RBP21.25■□□□□ 0.99
SORT1-201ENST00000256637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.25■□□□□ 0.99
SORT1-201ENST00000256637 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
SORT1-201ENST00000256637 CCDC18Q5T9S5 1454 aa21.23■□□□□ 0.99
SORT1-201ENST00000256637 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.991e-6■■■■□ 20.3
SORT1-201ENST00000256637 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
SORT1-201ENST00000256637 HMOX1P09601 288 aa21.22■□□□□ 0.99
SORT1-201ENST00000256637 APPP05067 770 aa21.22■□□□□ 0.99
SORT1-201ENST00000256637 FMN1Q68DA7 1419 aa21.21■□□□□ 0.99
SORT1-201ENST00000256637 RTN4Q9NQC3 1192 aaKnown RBP21.21■□□□□ 0.99
SORT1-201ENST00000256637 MFAP1P55081 439 aaKnown RBP21.21■□□□□ 0.99
SORT1-201ENST00000256637 CCDC27Q2M243 656 aa21.19■□□□□ 0.98
SORT1-201ENST00000256637 TMEM132EQ6IEE7 984 aa21.19■□□□□ 0.98
SORT1-201ENST00000256637 DDX54Q8TDD1 881 aaKnown RBP21.19■□□□□ 0.98
SORT1-201ENST00000256637 FOXD4L6Q3SYB3 417 aaPredicted RBP21.19■□□□□ 0.98
SORT1-201ENST00000256637 FOXD4L3Q6VB84 417 aaPredicted RBP21.19■□□□□ 0.98
SORT1-201ENST00000256637 KIAA2012Q0VF49 1180 aa21.19■□□□□ 0.98
SORT1-201ENST00000256637 NOC3LQ8WTT2 800 aaKnown RBP21.18■□□□□ 0.98
SORT1-201ENST00000256637 PES1O00541 588 aaKnown RBP21.17■□□□□ 0.98
SORT1-201ENST00000256637 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
SORT1-201ENST00000256637 FOSBP53539 338 aa21.16■□□□□ 0.98
SORT1-201ENST00000256637 C9orf78Q9NZ63 289 aaPredicted RBP21.16■□□□□ 0.98
SORT1-201ENST00000256637 PANK3Q9H999 370 aa21.16■□□□□ 0.98
SORT1-201ENST00000256637 RAB3GAP2Q9H2M9 1393 aa21.16■□□□□ 0.98
SORT1-201ENST00000256637 RAPGEF2Q9Y4G8 1499 aa21.16■□□□□ 0.98
SORT1-201ENST00000256637 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
SORT1-201ENST00000256637 ABTB2Q8N961 1025 aa21.16■□□□□ 0.98
SORT1-201ENST00000256637 TXNDC2Q86VQ3 553 aa21.15■□□□□ 0.98
SORT1-201ENST00000256637 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.98
SORT1-201ENST00000256637 IBSPP21815 317 aaPredicted RBP21.14■□□□□ 0.97
SORT1-201ENST00000256637 EVC2Q86UK5 1308 aa21.14■□□□□ 0.97
SORT1-201ENST00000256637 STK11IPQ8N1F8 1099 aa21.13■□□□□ 0.97
SORT1-201ENST00000256637 AMOTL1Q8IY63 956 aa21.13■□□□□ 0.97
SORT1-201ENST00000256637 PAXIP1Q6ZW49 1069 aaPredicted RBP21.12■□□□□ 0.97
SORT1-201ENST00000256637 L3MBTL2Q969R5 705 aa21.12■□□□□ 0.97
SORT1-201ENST00000256637 CCAR1Q8IX12 1150 aaKnown RBP21.12■□□□□ 0.97
SORT1-201ENST00000256637 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
SORT1-201ENST00000256637 GZF1Q9H116 711 aaPredicted RBP21.12■□□□□ 0.97
SORT1-201ENST00000256637 ADAMTS2O95450 1211 aa21.11■□□□□ 0.97
SORT1-201ENST00000256637 ARHGAP5Q13017 1502 aa21.1■□□□□ 0.97
SORT1-201ENST00000256637 BICDL1Q6ZP65 573 aa21.08■□□□□ 0.97
SORT1-201ENST00000256637 ZNF644Q9H582 1327 aaPredicted RBP21.08■□□□□ 0.96
SORT1-201ENST00000256637 NEXNQ0ZGT2 675 aa21.08■□□□□ 0.96
SORT1-201ENST00000256637 IKQ13123 557 aaPredicted RBP21.07■□□□□ 0.96
SORT1-201ENST00000256637 ARID3AQ99856 593 aa21.07■□□□□ 0.96
SORT1-201ENST00000256637 NLRP6P59044 892 aa21.07■□□□□ 0.96
SORT1-201ENST00000256637 TOM1L2Q6ZVM7 507 aa21.07■□□□□ 0.96
SORT1-201ENST00000256637 ST20-MTHFSA0A0A6YYL1 179 aa21.06■□□□□ 0.96
SORT1-201ENST00000256637 RIC3Q7Z5B4 369 aa21.06■□□□□ 0.96
SORT1-201ENST00000256637 LMOD3Q0VAK6 560 aa21.06■□□□□ 0.96
SORT1-201ENST00000256637 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms