RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 ERBINQ96RT1 1412 aa33.03■■■□□ 2.88
NXT1-201ENST00000254998 MROH2AA6NES4 1674 aa33.03■■■□□ 2.88
NXT1-201ENST00000254998 RNF17Q9BXT8 1623 aaKnown RBP33.02■■■□□ 2.88
NXT1-201ENST00000254998 C3P01024 1663 aa32.97■■■□□ 2.87
NXT1-201ENST00000254998 ROCK1Q13464 1354 aa32.97■■■□□ 2.87
NXT1-201ENST00000254998 CLTCQ00610 1675 aaKnown RBP32.97■■■□□ 2.87
NXT1-201ENST00000254998 CEBPAP49715 358 aaPredicted RBP32.95■■■□□ 2.87
NXT1-201ENST00000254998 ZMYM3Q14202 1370 aa32.95■■■□□ 2.86
NXT1-201ENST00000254998 KDM5DQ9BY66 1539 aa32.94■■■□□ 2.86
NXT1-201ENST00000254998 MROH1Q8NDA8 1641 aa32.92■■■□□ 2.86
NXT1-201ENST00000254998 PLPPR3Q6T4P5 718 aa32.91■■■□□ 2.86
NXT1-201ENST00000254998 SETD1BQ9UPS6 1966 aaKnown RBP32.88■■■□□ 2.85
NXT1-201ENST00000254998 DEPDC5O75140 1603 aa32.88■■■□□ 2.85
NXT1-201ENST00000254998 PRDM15P57071 1507 aaPredicted RBP32.87■■■□□ 2.85
NXT1-201ENST00000254998 NPATQ14207 1427 aa32.87■■■□□ 2.85
NXT1-201ENST00000254998 ANKRD50Q9ULJ7 1429 aa32.87■■■□□ 2.85
NXT1-201ENST00000254998 WASHC2CQ9Y4E1 1318 aa32.87■■■□□ 2.85
NXT1-201ENST00000254998 ITGAEP38570 1179 aa32.86■■■□□ 2.85
NXT1-201ENST00000254998 ZC3H13Q5T200 1668 aaKnown RBP32.85■■■□□ 2.85
NXT1-201ENST00000254998 ABCC3O15438 1527 aa32.84■■■□□ 2.85
NXT1-201ENST00000254998 LMTK3Q96Q04 1460 aa32.83■■■□□ 2.85
NXT1-201ENST00000254998 PREX1Q8TCU6 1659 aa32.81■■■□□ 2.84
NXT1-201ENST00000254998 PZPP20742 1482 aa32.79■■■□□ 2.84
NXT1-201ENST00000254998 VWDEQ8N2E2 1590 aa32.76■■■□□ 2.84
NXT1-201ENST00000254998 KANK1Q14678 1352 aa32.75■■■□□ 2.83
NXT1-201ENST00000254998 UHRF1BP1Q6BDS2 1440 aa32.74■■■□□ 2.83
NXT1-201ENST00000254998 CEP152O94986 1710 aa32.74■■■□□ 2.83
NXT1-201ENST00000254998 LMTK2Q8IWU2 1503 aa32.72■■■□□ 2.83
NXT1-201ENST00000254998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.71■■■□□ 2.83
NXT1-201ENST00000254998 CAMSAP1Q5T5Y3 1602 aa32.7■■■□□ 2.83
NXT1-201ENST00000254998 ARHGAP31Q2M1Z3 1444 aa32.69■■■□□ 2.82
NXT1-201ENST00000254998 UNC13BO14795 1591 aa32.68■■■□□ 2.82
NXT1-201ENST00000254998 FBXO31Q5XUX0 539 aaPredicted RBP32.66■■■□□ 2.82
NXT1-201ENST00000254998 NAIPQ13075 1403 aa32.66■■■□□ 2.82
NXT1-201ENST00000254998 HFM1A2PYH4 1435 aa32.64■■■□□ 2.82
NXT1-201ENST00000254998 TNRQ92752 1358 aa32.64■■■□□ 2.82
NXT1-201ENST00000254998 GCC2Q8IWJ2 1684 aa32.63■■■□□ 2.81
NXT1-201ENST00000254998 MYO3AQ8NEV4 1616 aa32.62■■■□□ 2.81
NXT1-201ENST00000254998 SPATA31D1Q6ZQQ2 1576 aa32.62■■■□□ 2.81
NXT1-201ENST00000254998 HSPA2P54652 639 aa32.6■■■□□ 2.81
NXT1-201ENST00000254998 ERVK-7P63135 1459 aa32.6■■■□□ 2.81
NXT1-201ENST00000254998 ZNF142P52746 1687 aaPredicted RBP32.59■■■□□ 2.81
NXT1-201ENST00000254998 EFCAB6Q5THR3 1501 aa32.58■■■□□ 2.81
NXT1-201ENST00000254998 CEP170BQ9Y4F5 1589 aaPredicted RBP32.56■■■□□ 2.8
NXT1-201ENST00000254998 IQGAP3Q86VI3 1631 aa32.55■■■□□ 2.8
NXT1-201ENST00000254998 A2ML1A8K2U0 1454 aa32.54■■■□□ 2.8
NXT1-201ENST00000254998 NLRP1Q9C000 1473 aa32.54■■■□□ 2.8
NXT1-201ENST00000254998 TET3O43151 1660 aa32.54■■■□□ 2.8
NXT1-201ENST00000254998 NUP155O75694 1391 aa32.52■■■□□ 2.8
NXT1-201ENST00000254998 RPRD2Q5VT52 1461 aaKnown RBP32.51■■■□□ 2.79
NXT1-201ENST00000254998 CFAP65Q6ZU64 1925 aaKnown RBP32.49■■■□□ 2.79
NXT1-201ENST00000254998 NOS1P29475 1434 aa32.45■■■□□ 2.79
NXT1-201ENST00000254998 PLA2R1Q13018 1463 aa32.42■■■□□ 2.78
NXT1-201ENST00000254998 STRCQ7RTU9 1775 aa32.41■■■□□ 2.78
NXT1-201ENST00000254998 E9PCH4 1651 aa32.39■■■□□ 2.78
NXT1-201ENST00000254998 SYNMO15061 1565 aa32.38■■■□□ 2.77
NXT1-201ENST00000254998 UGGT1Q9NYU2 1555 aa32.38■■■□□ 2.77
NXT1-201ENST00000254998 THEMISQ8N1K5 641 aaPredicted RBP32.35■■■□□ 2.77
NXT1-201ENST00000254998 SETD5Q9C0A6 1442 aa32.34■■■□□ 2.77
NXT1-201ENST00000254998 DMRT2Q9Y5R5 561 aa32.33■■■□□ 2.77
NXT1-201ENST00000254998 ACIN1Q9UKV3 1341 aaKnown RBP32.32■■■□□ 2.76
NXT1-201ENST00000254998 SLC52A1Q9NWF4 448 aa32.32■■■□□ 2.76
NXT1-201ENST00000254998 PKD2Q13563 968 aa32.3■■■□□ 2.76
NXT1-201ENST00000254998 UBR1Q8IWV7 1749 aa32.3■■■□□ 2.76
NXT1-201ENST00000254998 TRIM52Q96A61 297 aa32.3■■■□□ 2.76
NXT1-201ENST00000254998 PTPRTO14522 1441 aa32.29■■■□□ 2.76
NXT1-201ENST00000254998 IDI1Q13907 227 aa32.29■■■□□ 2.76
NXT1-201ENST00000254998 KDM5AP29375 1690 aaKnown RBP32.29■■■□□ 2.76
NXT1-201ENST00000254998 PIK3C2BO00750 1634 aa32.28■■■□□ 2.76
NXT1-201ENST00000254998 NCKAP5LQ9HCH0 1330 aa32.25■■■□□ 2.75
NXT1-201ENST00000254998 ARHGAP23Q9P227 1491 aa32.21■■■□□ 2.75
NXT1-201ENST00000254998 ADGRB3O60242 1522 aa32.21■■■□□ 2.75
NXT1-201ENST00000254998 SLIT1O75093 1534 aa32.21■■■□□ 2.75
NXT1-201ENST00000254998 RAB3GAP2Q9H2M9 1393 aa32.2■■■□□ 2.75
NXT1-201ENST00000254998 ANKLE2Q86XL3 938 aa32.2■■■□□ 2.75
NXT1-201ENST00000254998 SLC4A1APQ9BWU0 796 aaKnown RBP32.2■■■□□ 2.75
NXT1-201ENST00000254998 POLR1AO95602 1720 aaPredicted RBP32.2■■■□□ 2.74
NXT1-201ENST00000254998 SPHKAPQ2M3C7 1700 aa32.19■■■□□ 2.74
NXT1-201ENST00000254998 NEURL4Q96JN8 1562 aa32.17■■■□□ 2.74
NXT1-201ENST00000254998 STAG3Q9UJ98 1225 aa32.17■■■□□ 2.74
NXT1-201ENST00000254998 MED14O60244 1454 aa32.16■■■□□ 2.74
NXT1-201ENST00000254998 HRCP23327 699 aa32.15■■■□□ 2.74
NXT1-201ENST00000254998 TMEM2Q9UHN6 1383 aa32.15■■■□□ 2.74
NXT1-201ENST00000254998 TRPM2O94759 1503 aa32.13■■■□□ 2.73
NXT1-201ENST00000254998 TMEM131LA2VDJ0 1609 aa32.12■■■□□ 2.73
NXT1-201ENST00000254998 MPHOSPH9Q99550 1183 aa32.11■■■□□ 2.73
NXT1-201ENST00000254998 SCAF11Q99590 1463 aaKnown RBP32.1■■■□□ 2.73
NXT1-201ENST00000254998 NPHP4O75161 1426 aaPredicted RBP32.08■■■□□ 2.73
NXT1-201ENST00000254998 LTKP29376 864 aa32.06■■■□□ 2.72
NXT1-201ENST00000254998 EID1Q9Y6B2 187 aa32.06■■■□□ 2.72
NXT1-201ENST00000254998 TXNDC2Q86VQ3 553 aa32.05■■■□□ 2.72
NXT1-201ENST00000254998 MYO5BQ9ULV0 1848 aa32.05■■■□□ 2.72
NXT1-201ENST00000254998 CLTCL1P53675 1640 aa32.04■■■□□ 2.72
NXT1-201ENST00000254998 IQGAP1P46940 1657 aa32.03■■■□□ 2.72
NXT1-201ENST00000254998 ZFYVE9O95405 1425 aa32.02■■■□□ 2.72
NXT1-201ENST00000254998 CHGAP10645 457 aaKnown RBP31.99■■■□□ 2.71
NXT1-201ENST00000254998 RIMS2Q9UQ26 1411 aa31.99■■■□□ 2.71
NXT1-201ENST00000254998 FOXD1Q16676 465 aa31.98■■■□□ 2.71
NXT1-201ENST00000254998 HDGFP51858 240 aaKnown RBP31.96■■■□□ 2.71
NXT1-201ENST00000254998 LTBP4Q8N2S1 1624 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms