RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 PTPRMP28827 1452 aa5.04□□□□□ -1.6
PHTF2-201ENST00000248550 PLA2R1Q13018 1463 aa5.04□□□□□ -1.6
PHTF2-201ENST00000248550 CPS1P31327 1500 aa5.03□□□□□ -1.6
PHTF2-201ENST00000248550 LRPPRCP42704 1394 aaKnown RBP5.03□□□□□ -1.6
PHTF2-201ENST00000248550 CADPS2Q86UW7 1296 aa5.03□□□□□ -1.6
PHTF2-201ENST00000248550 PPRC1Q5VV67 1664 aaKnown RBP5.03□□□□□ -1.6
PHTF2-201ENST00000248550 KIAA1107Q9UPP5 1409 aa5.03□□□□□ -1.6
PHTF2-201ENST00000248550 MLH3Q9UHC1 1453 aa5.03□□□□□ -1.6
PHTF2-201ENST00000248550 CSB-PGBD3P0DP91 1061 aa5.03□□□□□ -1.6
PHTF2-201ENST00000248550 ZBTB7CA1YPR0 619 aa5.03□□□□□ -1.6
PHTF2-201ENST00000248550 TROQ12816 1431 aaPredicted RBP5.02□□□□□ -1.61
PHTF2-201ENST00000248550 YEATS2Q9ULM3 1422 aa5.02□□□□□ -1.61
PHTF2-201ENST00000248550 RTEL1-TNFRSF6BF6WH68 1400 aa5.02□□□□□ -1.61
PHTF2-201ENST00000248550 LRRC9Q6ZRR7 1453 aa5.02□□□□□ -1.61
PHTF2-201ENST00000248550 FYCO1Q9BQS8 1478 aa5.02□□□□□ -1.61
PHTF2-201ENST00000248550 ARHGEF12Q9NZN5 1544 aa5.01□□□□□ -1.61
PHTF2-201ENST00000248550 MYO5CQ9NQX4 1742 aa5.01□□□□□ -1.61
PHTF2-201ENST00000248550 TRAPPC8Q9Y2L5 1435 aa5.01□□□□□ -1.61
PHTF2-201ENST00000248550 GPR162Q16538 588 aa5.01□□□□□ -1.61
PHTF2-201ENST00000248550 ITSN2Q9NZM3 1697 aa5.01□□□□□ -1.61
PHTF2-201ENST00000248550 ATP10BO94823 1461 aa5□□□□□ -1.61
PHTF2-201ENST00000248550 SRPK2P78362 688 aaKnown RBP5□□□□□ -1.61
PHTF2-201ENST00000248550 IL27Q8NEV9 243 aa5□□□□□ -1.61
PHTF2-201ENST00000248550 STK32BQ9NY57 414 aa5□□□□□ -1.61
PHTF2-201ENST00000248550 POGKQ9P215 609 aa5□□□□□ -1.61
PHTF2-201ENST00000248550 YY1P25490 414 aa5□□□□□ -1.61
PHTF2-201ENST00000248550 CASKIN1Q8WXD9 1431 aa5□□□□□ -1.61
PHTF2-201ENST00000248550 SLC24A1O60721 1099 aa5□□□□□ -1.61
PHTF2-201ENST00000248550 MTUS2Q5JR59 1369 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 RAPGEF3O95398 923 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 LRRC59Q96AG4 307 aaKnown RBP4.99□□□□□ -1.61
PHTF2-201ENST00000248550 ATAD2Q6PL18 1390 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 TRPC5Q9UL62 973 aaPredicted RBP4.99□□□□□ -1.61
PHTF2-201ENST00000248550 ARHGEF6Q15052 776 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 TXNDC2Q86VQ3 553 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 NLRP1Q9C000 1473 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 ARHGAP5Q13017 1502 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 EHBP1L1Q8N3D4 1523 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 CAMSAP2Q08AD1 1489 aa4.99□□□□□ -1.61
PHTF2-201ENST00000248550 TSPOAP1O95153 1857 aa4.98□□□□□ -1.61
PHTF2-201ENST00000248550 KDM4FA0A1W2PPD8 638 aa4.98□□□□□ -1.61
PHTF2-201ENST00000248550 HSPA2P54652 639 aa4.98□□□□□ -1.61
PHTF2-201ENST00000248550 KDM5CP41229 1560 aa4.98□□□□□ -1.61
PHTF2-201ENST00000248550 CCNB3Q8WWL7 1395 aa4.98□□□□□ -1.61
PHTF2-201ENST00000248550 GRIN3BO60391 1043 aa4.98□□□□□ -1.61
PHTF2-201ENST00000248550 ZC3H13Q5T200 1668 aaKnown RBP4.97□□□□□ -1.61
PHTF2-201ENST00000248550 ADGBQ8N7X0 1667 aa4.97□□□□□ -1.61
PHTF2-201ENST00000248550 FER1L4A9Z1Z3 1794 aa4.97□□□□□ -1.61
PHTF2-201ENST00000248550 SCAPERQ9BY12 1400 aa4.97□□□□□ -1.61
PHTF2-201ENST00000248550 ZNF710Q8N1W2 664 aa4.97□□□□□ -1.61
PHTF2-201ENST00000248550 BCL11BQ9C0K0 894 aaPredicted RBP4.97□□□□□ -1.61
PHTF2-201ENST00000248550 RBM6P78332 1123 aaKnown RBP4.96□□□□□ -1.61
PHTF2-201ENST00000248550 PAXIP1Q6ZW49 1069 aaPredicted RBP4.96□□□□□ -1.61
PHTF2-201ENST00000248550 SYNMO15061 1565 aa4.96□□□□□ -1.61
PHTF2-201ENST00000248550 MAP3K9P80192 1104 aa4.96□□□□□ -1.62
PHTF2-201ENST00000248550 G3V3G9 751 aa4.96□□□□□ -1.62
PHTF2-201ENST00000248550 KIF3BO15066 747 aa4.96□□□□□ -1.62
PHTF2-201ENST00000248550 DCAF8Q5TAQ9 597 aa4.96□□□□□ -1.62
PHTF2-201ENST00000248550 MAP3K1Q13233 1512 aa4.96□□□□□ -1.62
PHTF2-201ENST00000248550 RIMS1Q86UR5 1692 aaKnown RBP4.96□□□□□ -1.62
PHTF2-201ENST00000248550 NCOA3Q9Y6Q9 1424 aa4.95□□□□□ -1.62
PHTF2-201ENST00000248550 NUP153P49790 1475 aaKnown RBP4.95□□□□□ -1.62
PHTF2-201ENST00000248550 RPRD2Q5VT52 1461 aaKnown RBP4.95□□□□□ -1.62
PHTF2-201ENST00000248550 GIGYF1O75420 1035 aaPredicted RBP4.95□□□□□ -1.62
PHTF2-201ENST00000248550 PREX2Q70Z35 1606 aa4.95□□□□□ -1.62
PHTF2-201ENST00000248550 RICTORQ6R327 1708 aa4.95□□□□□ -1.62
PHTF2-201ENST00000248550 ZNF142P52746 1687 aaPredicted RBP4.95□□□□□ -1.62
PHTF2-201ENST00000248550 AATKQ6ZMQ8 1374 aa4.95□□□□□ -1.62
PHTF2-201ENST00000248550 A2ML1A8K2U0 1454 aa4.95□□□□□ -1.62
PHTF2-201ENST00000248550 KRI1Q8N9T8 703 aaKnown RBP4.95□□□□□ -1.62
PHTF2-201ENST00000248550 EIF3AQ14152 1382 aaKnown RBP4.95□□□□□ -1.62
PHTF2-201ENST00000248550 PLEKHG5O94827 1062 aa4.95□□□□□ -1.62
PHTF2-201ENST00000248550 EIF2AK4Q9P2K8 1649 aaKnown RBP4.94□□□□□ -1.62
PHTF2-201ENST00000248550 KDM5DQ9BY66 1539 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 FAM50AQ14320 339 aaKnown RBP4.94□□□□□ -1.62
PHTF2-201ENST00000248550 SPON1Q9HCB6 807 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 MADDQ8WXG6 1647 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 FAM83GA6ND36 823 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 GPRASP1Q5JY77 1395 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 NCOA2Q15596 1464 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 SPATA31D1Q6ZQQ2 1576 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 ABCC1P33527 1531 aa4.94□□□□□ -1.62
PHTF2-201ENST00000248550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.93□□□□□ -1.62
PHTF2-201ENST00000248550 SPATA31A6Q5VVP1 1343 aa4.93□□□□□ -1.62
PHTF2-201ENST00000248550 ARHGEF5Q12774 1597 aa4.93□□□□□ -1.62
PHTF2-201ENST00000248550 ABCC3O15438 1527 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 NCOA1Q15788 1441 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 PTPN23Q9H3S7 1636 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 MIA2Q96PC5 1412 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 NGDNQ8NEJ9 315 aaKnown RBP4.92□□□□□ -1.62
PHTF2-201ENST00000248550 FRMPD1Q5SYB0 1578 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 GOLGA2Q08379 1002 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 C8orf37Q96NL8 207 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 MAST1Q9Y2H9 1570 aa4.92□□□□□ -1.62
PHTF2-201ENST00000248550 PAK3O75914 559 aaPredicted RBP4.92□□□□□ -1.62
PHTF2-201ENST00000248550 SHANK2Q9UPX8 1470 aa4.91□□□□□ -1.62
PHTF2-201ENST00000248550 DEPDC5O75140 1603 aa4.91□□□□□ -1.62
PHTF2-201ENST00000248550 GCC1Q96CN9 775 aa4.91□□□□□ -1.62
PHTF2-201ENST00000248550 QTRT2Q9H974 415 aaKnown RBP4.91□□□□□ -1.62
PHTF2-201ENST00000248550 A2MP01023 1474 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms