RNA–Protein interactions for RNA: ENST00000244070.7

PPP4R1L-201, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PPP4R1L, Length 1,474 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-201ENST00000244070 RTEL1-TNFRSF6BF6WH68 1400 aa18.65■□□□□ 0.58
PPP4R1L-201ENST00000244070 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
PPP4R1L-201ENST00000244070 CEP162Q5TB80 1403 aa18.63■□□□□ 0.57
PPP4R1L-201ENST00000244070 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
PPP4R1L-201ENST00000244070 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
PPP4R1L-201ENST00000244070 PZPP20742 1482 aa18.61■□□□□ 0.57
PPP4R1L-201ENST00000244070 TNRQ92752 1358 aa18.6■□□□□ 0.57
PPP4R1L-201ENST00000244070 CCDC141Q6ZP82 1450 aa18.6■□□□□ 0.57
PPP4R1L-201ENST00000244070 CAMSAP2Q08AD1 1489 aa18.59■□□□□ 0.57
PPP4R1L-201ENST00000244070 CPS1P31327 1500 aa18.59■□□□□ 0.57
PPP4R1L-201ENST00000244070 FAM135AQ9P2D6 1515 aa18.59■□□□□ 0.57
PPP4R1L-201ENST00000244070 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.57
PPP4R1L-201ENST00000244070 VWDEQ8N2E2 1590 aa18.58■□□□□ 0.56
PPP4R1L-201ENST00000244070 KIF3BO15066 747 aa18.58■□□□□ 0.56
PPP4R1L-201ENST00000244070 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
PPP4R1L-201ENST00000244070 MED1Q15648 1581 aaPredicted RBP18.56■□□□□ 0.56
PPP4R1L-201ENST00000244070 HSPA1LP34931 641 aa18.56■□□□□ 0.56
PPP4R1L-201ENST00000244070 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
PPP4R1L-201ENST00000244070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
PPP4R1L-201ENST00000244070 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
PPP4R1L-201ENST00000244070 DEPDC5O75140 1603 aa18.54■□□□□ 0.56
PPP4R1L-201ENST00000244070 PIP4K2BP78356 416 aa18.53■□□□□ 0.56
PPP4R1L-201ENST00000244070 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
PPP4R1L-201ENST00000244070 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
PPP4R1L-201ENST00000244070 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
PPP4R1L-201ENST00000244070 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
PPP4R1L-201ENST00000244070 MIA2Q96PC5 1412 aa18.52■□□□□ 0.56
PPP4R1L-201ENST00000244070 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
PPP4R1L-201ENST00000244070 MED14O60244 1454 aa18.52■□□□□ 0.55
PPP4R1L-201ENST00000244070 IQGAP1P46940 1657 aa18.52■□□□□ 0.55
PPP4R1L-201ENST00000244070 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.55
PPP4R1L-201ENST00000244070 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
PPP4R1L-201ENST00000244070 TOM1O60784 492 aa18.49■□□□□ 0.55
PPP4R1L-201ENST00000244070 ANKLE2Q86XL3 938 aa18.49■□□□□ 0.55
PPP4R1L-201ENST00000244070 ZC3H13Q5T200 1668 aaKnown RBP18.48■□□□□ 0.55
PPP4R1L-201ENST00000244070 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
PPP4R1L-201ENST00000244070 ABCC3O15438 1527 aa18.48■□□□□ 0.55
PPP4R1L-201ENST00000244070 RSPH4AQ5TD94 716 aa18.47■□□□□ 0.55
PPP4R1L-201ENST00000244070 THEMISQ8N1K5 641 aaPredicted RBP18.47■□□□□ 0.55
PPP4R1L-201ENST00000244070 MROH1Q8NDA8 1641 aa18.46■□□□□ 0.55
PPP4R1L-201ENST00000244070 MAST1Q9Y2H9 1570 aa18.46■□□□□ 0.55
PPP4R1L-201ENST00000244070 CEP152O94986 1710 aa18.45■□□□□ 0.54
PPP4R1L-201ENST00000244070 EIF2AK4Q9P2K8 1649 aaKnown RBP18.44■□□□□ 0.54
PPP4R1L-201ENST00000244070 UBR1Q8IWV7 1749 aa18.43■□□□□ 0.54
PPP4R1L-201ENST00000244070 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
PPP4R1L-201ENST00000244070 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
PPP4R1L-201ENST00000244070 SYNMO15061 1565 aa18.42■□□□□ 0.54
PPP4R1L-201ENST00000244070 TSPY4P0CV99 314 aa18.41■□□□□ 0.54
PPP4R1L-201ENST00000244070 TSPY10P0CW01 314 aa18.41■□□□□ 0.54
PPP4R1L-201ENST00000244070 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
PPP4R1L-201ENST00000244070 XIRP1Q702N8 1843 aaKnown RBP18.39■□□□□ 0.53
PPP4R1L-201ENST00000244070 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
PPP4R1L-201ENST00000244070 VPS8Q8N3P4 1428 aa18.34■□□□□ 0.53
PPP4R1L-201ENST00000244070 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.52
PPP4R1L-201ENST00000244070 SLIT1O75093 1534 aa18.33■□□□□ 0.52
PPP4R1L-201ENST00000244070 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.52
PPP4R1L-201ENST00000244070 FOXD1Q16676 465 aa18.33■□□□□ 0.52
PPP4R1L-201ENST00000244070 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
PPP4R1L-201ENST00000244070 CROCC2H7BZ55 1655 aa18.32■□□□□ 0.52
PPP4R1L-201ENST00000244070 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
PPP4R1L-201ENST00000244070 LTKP29376 864 aa18.31■□□□□ 0.52
PPP4R1L-201ENST00000244070 MYOM3Q5VTT5 1437 aa18.31■□□□□ 0.52
PPP4R1L-201ENST00000244070 PIK3C2BO00750 1634 aa18.3■□□□□ 0.52
PPP4R1L-201ENST00000244070 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
PPP4R1L-201ENST00000244070 ARHGAP31Q2M1Z3 1444 aa18.28■□□□□ 0.52
PPP4R1L-201ENST00000244070 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
PPP4R1L-201ENST00000244070 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
PPP4R1L-201ENST00000244070 ERBINQ96RT1 1412 aa18.24■□□□□ 0.51
PPP4R1L-201ENST00000244070 RGS17Q9UGC6 210 aaPredicted RBP18.24■□□□□ 0.51
PPP4R1L-201ENST00000244070 ABCC5O15440 1437 aa18.24■□□□□ 0.51
PPP4R1L-201ENST00000244070 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
PPP4R1L-201ENST00000244070 PTPN23Q9H3S7 1636 aa18.22■□□□□ 0.51
PPP4R1L-201ENST00000244070 TMEM2Q9UHN6 1383 aa18.21■□□□□ 0.51
PPP4R1L-201ENST00000244070 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
PPP4R1L-201ENST00000244070 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
PPP4R1L-201ENST00000244070 EFCAB6Q5THR3 1501 aa18.2■□□□□ 0.5
PPP4R1L-201ENST00000244070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
PPP4R1L-201ENST00000244070 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
PPP4R1L-201ENST00000244070 TET3O43151 1660 aa18.19■□□□□ 0.5
PPP4R1L-201ENST00000244070 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
PPP4R1L-201ENST00000244070 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
PPP4R1L-201ENST00000244070 DAPK1P53355 1430 aa18.18■□□□□ 0.5
PPP4R1L-201ENST00000244070 FAM135BQ49AJ0 1406 aa18.18■□□□□ 0.5
PPP4R1L-201ENST00000244070 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
PPP4R1L-201ENST00000244070 IDI1Q13907 227 aa18.14■□□□□ 0.5
PPP4R1L-201ENST00000244070 ADGRB3O60242 1522 aa18.14■□□□□ 0.49
PPP4R1L-201ENST00000244070 NWD1Q149M9 1564 aa18.14■□□□□ 0.49
PPP4R1L-201ENST00000244070 MYO5BQ9ULV0 1848 aa18.14■□□□□ 0.49
PPP4R1L-201ENST00000244070 KANK1Q14678 1352 aa18.13■□□□□ 0.49
PPP4R1L-201ENST00000244070 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
PPP4R1L-201ENST00000244070 SLC26A8Q96RN1 970 aa18.13■□□□□ 0.49
PPP4R1L-201ENST00000244070 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
PPP4R1L-201ENST00000244070 NOS1P29475 1434 aa18.12■□□□□ 0.49
PPP4R1L-201ENST00000244070 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
PPP4R1L-201ENST00000244070 KCNA6P17658 529 aa18.12■□□□□ 0.49
PPP4R1L-201ENST00000244070 POTEAQ6S8J7 498 aa18.1■□□□□ 0.49
PPP4R1L-201ENST00000244070 NKTRP30414 1462 aaKnown RBP18.1■□□□□ 0.49
PPP4R1L-201ENST00000244070 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
PPP4R1L-201ENST00000244070 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
PPP4R1L-201ENST00000244070 CHD2O14647 1828 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms