RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 NCOA1Q15788 1441 aa16.36■□□□□ 0.21
PFDN5-201ENST00000243040 KDM5DQ9BY66 1539 aa16.35■□□□□ 0.21
PFDN5-201ENST00000243040 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
PFDN5-201ENST00000243040 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
PFDN5-201ENST00000243040 PRDM15P57071 1507 aaPredicted RBP16.34■□□□□ 0.21
PFDN5-201ENST00000243040 PTPRKQ15262 1439 aa16.33■□□□□ 0.2
PFDN5-201ENST00000243040 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.2
PFDN5-201ENST00000243040 KIF3BO15066 747 aa16.32■□□□□ 0.2
PFDN5-201ENST00000243040 GGT6Q6P531 493 aa16.31■□□□□ 0.2
PFDN5-201ENST00000243040 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
PFDN5-201ENST00000243040 CEP152O94986 1710 aa16.31■□□□□ 0.2
PFDN5-201ENST00000243040 LMTK3Q96Q04 1460 aa16.3■□□□□ 0.2
PFDN5-201ENST00000243040 ROCK1Q13464 1354 aa16.3■□□□□ 0.2
PFDN5-201ENST00000243040 ABCC3O15438 1527 aa16.29■□□□□ 0.2
PFDN5-201ENST00000243040 NPATQ14207 1427 aa16.28■□□□□ 0.2
PFDN5-201ENST00000243040 ZMYM3Q14202 1370 aa16.28■□□□□ 0.2
PFDN5-201ENST00000243040 CAMSAP1Q5T5Y3 1602 aa16.28■□□□□ 0.2
PFDN5-201ENST00000243040 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
PFDN5-201ENST00000243040 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
PFDN5-201ENST00000243040 VWDEQ8N2E2 1590 aa16.27■□□□□ 0.2
PFDN5-201ENST00000243040 PZPP20742 1482 aa16.26■□□□□ 0.19
PFDN5-201ENST00000243040 ZNF142P52746 1687 aaPredicted RBP16.26■□□□□ 0.19
PFDN5-201ENST00000243040 ANKRD50Q9ULJ7 1429 aa16.26■□□□□ 0.19
PFDN5-201ENST00000243040 MYO3AQ8NEV4 1616 aa16.26■□□□□ 0.19
PFDN5-201ENST00000243040 UNC13BO14795 1591 aa16.26■□□□□ 0.19
PFDN5-201ENST00000243040 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
PFDN5-201ENST00000243040 CEBPAP49715 358 aaPredicted RBP16.25■□□□□ 0.19
PFDN5-201ENST00000243040 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
PFDN5-201ENST00000243040 UHRF1BP1Q6BDS2 1440 aa16.23■□□□□ 0.19
PFDN5-201ENST00000243040 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
PFDN5-201ENST00000243040 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.19
PFDN5-201ENST00000243040 SPATA31D1Q6ZQQ2 1576 aa16.21■□□□□ 0.18
PFDN5-201ENST00000243040 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
PFDN5-201ENST00000243040 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
PFDN5-201ENST00000243040 TET3O43151 1660 aa16.18■□□□□ 0.18
PFDN5-201ENST00000243040 CEP170BQ9Y4F5 1589 aaPredicted RBP16.18■□□□□ 0.18
PFDN5-201ENST00000243040 KANK1Q14678 1352 aa16.18■□□□□ 0.18
PFDN5-201ENST00000243040 IQGAP3Q86VI3 1631 aa16.18■□□□□ 0.18
PFDN5-201ENST00000243040 ITGAEP38570 1179 aa16.17■□□□□ 0.18
PFDN5-201ENST00000243040 ERVK-7P63135 1459 aa16.16■□□□□ 0.18
PFDN5-201ENST00000243040 NAIPQ13075 1403 aa16.15■□□□□ 0.18
PFDN5-201ENST00000243040 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
PFDN5-201ENST00000243040 HFM1A2PYH4 1435 aa16.14■□□□□ 0.17
PFDN5-201ENST00000243040 TNRQ92752 1358 aa16.13■□□□□ 0.17
PFDN5-201ENST00000243040 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
PFDN5-201ENST00000243040 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
PFDN5-201ENST00000243040 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
PFDN5-201ENST00000243040 RPRD2Q5VT52 1461 aaKnown RBP16.12■□□□□ 0.17
PFDN5-201ENST00000243040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.177e-8■■□□□ 12.6
PFDN5-201ENST00000243040 E9PCH4 1651 aa16.11■□□□□ 0.17
PFDN5-201ENST00000243040 FBXO31Q5XUX0 539 aaPredicted RBP16.1■□□□□ 0.17
PFDN5-201ENST00000243040 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
PFDN5-201ENST00000243040 KDM5AP29375 1690 aaKnown RBP16.09■□□□□ 0.17
PFDN5-201ENST00000243040 HSPA2P54652 639 aa16.09■□□□□ 0.17
PFDN5-201ENST00000243040 SYNMO15061 1565 aa16.09■□□□□ 0.17
PFDN5-201ENST00000243040 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.17
PFDN5-201ENST00000243040 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
PFDN5-201ENST00000243040 NOS1P29475 1434 aa16.07■□□□□ 0.16
PFDN5-201ENST00000243040 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
PFDN5-201ENST00000243040 PIK3C2BO00750 1634 aa16.05■□□□□ 0.16
PFDN5-201ENST00000243040 NUP155O75694 1391 aa16.04■□□□□ 0.16
PFDN5-201ENST00000243040 SPHKAPQ2M3C7 1700 aa16.03■□□□□ 0.16
PFDN5-201ENST00000243040 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
PFDN5-201ENST00000243040 ADGRB3O60242 1522 aa16■□□□□ 0.15
PFDN5-201ENST00000243040 PTPRTO14522 1441 aa16■□□□□ 0.15
PFDN5-201ENST00000243040 SLIT1O75093 1534 aa15.99■□□□□ 0.15
PFDN5-201ENST00000243040 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
PFDN5-201ENST00000243040 ARHGAP23Q9P227 1491 aa15.97■□□□□ 0.15
PFDN5-201ENST00000243040 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
PFDN5-201ENST00000243040 PKD2Q13563 968 aa15.96■□□□□ 0.15
PFDN5-201ENST00000243040 THEMISQ8N1K5 641 aaPredicted RBP15.96■□□□□ 0.15
PFDN5-201ENST00000243040 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
PFDN5-201ENST00000243040 TMEM131LA2VDJ0 1609 aa15.96■□□□□ 0.15
PFDN5-201ENST00000243040 TRPM2O94759 1503 aa15.95■□□□□ 0.14
PFDN5-201ENST00000243040 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
PFDN5-201ENST00000243040 MED14O60244 1454 aa15.95■□□□□ 0.14
PFDN5-201ENST00000243040 IQGAP1P46940 1657 aa15.94■□□□□ 0.14
PFDN5-201ENST00000243040 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
PFDN5-201ENST00000243040 IDI1Q13907 227 aa15.93■□□□□ 0.14
PFDN5-201ENST00000243040 NCKAP5LQ9HCH0 1330 aa15.92■□□□□ 0.14
PFDN5-201ENST00000243040 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
PFDN5-201ENST00000243040 SCAF11Q99590 1463 aaKnown RBP15.91■□□□□ 0.14
PFDN5-201ENST00000243040 RAB3GAP2Q9H2M9 1393 aa15.9■□□□□ 0.14
PFDN5-201ENST00000243040 TRIM52Q96A61 297 aa15.9■□□□□ 0.14
PFDN5-201ENST00000243040 KIF1BO60333 1816 aa15.89■□□□□ 0.13
PFDN5-201ENST00000243040 TMEM2Q9UHN6 1383 aa15.89■□□□□ 0.13
PFDN5-201ENST00000243040 ANKLE2Q86XL3 938 aa15.89■□□□□ 0.13
PFDN5-201ENST00000243040 NPHP4O75161 1426 aaPredicted RBP15.88■□□□□ 0.13
PFDN5-201ENST00000243040 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
PFDN5-201ENST00000243040 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
PFDN5-201ENST00000243040 ZFYVE9O95405 1425 aa15.86■□□□□ 0.13
PFDN5-201ENST00000243040 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
PFDN5-201ENST00000243040 HRCP23327 699 aa15.84■□□□□ 0.13
PFDN5-201ENST00000243040 LTKP29376 864 aa15.82■□□□□ 0.12
PFDN5-201ENST00000243040 MPHOSPH9Q99550 1183 aa15.82■□□□□ 0.12
PFDN5-201ENST00000243040 RIMS2Q9UQ26 1411 aa15.82■□□□□ 0.12
PFDN5-201ENST00000243040 TXNDC2Q86VQ3 553 aa15.81■□□□□ 0.12
PFDN5-201ENST00000243040 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
PFDN5-201ENST00000243040 NEXMIFQ5QGS0 1516 aa15.8■□□□□ 0.12
PFDN5-201ENST00000243040 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms