RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
SLIRP-201ENST00000238688 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
SLIRP-201ENST00000238688 FBXO41Q8TF61 875 aa19.65■□□□□ 0.74
SLIRP-201ENST00000238688 MYO3AQ8NEV4 1616 aa19.64■□□□□ 0.73
SLIRP-201ENST00000238688 ZNF142P52746 1687 aaPredicted RBP19.63■□□□□ 0.73
SLIRP-201ENST00000238688 KIF3BO15066 747 aa19.63■□□□□ 0.73
SLIRP-201ENST00000238688 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
SLIRP-201ENST00000238688 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
SLIRP-201ENST00000238688 NCOA1Q15788 1441 aa19.61■□□□□ 0.73
SLIRP-201ENST00000238688 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
SLIRP-201ENST00000238688 CCER1Q8TC90 406 aaPredicted RBP19.6■□□□□ 0.73
SLIRP-201ENST00000238688 CAMSAP1Q5T5Y3 1602 aa19.6■□□□□ 0.73
SLIRP-201ENST00000238688 PTPRTO14522 1441 aa19.59■□□□□ 0.73
SLIRP-201ENST00000238688 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
SLIRP-201ENST00000238688 RNF17Q9BXT8 1623 aaKnown RBP19.59■□□□□ 0.73
SLIRP-201ENST00000238688 FAM135AQ9P2D6 1515 aa19.59■□□□□ 0.73
SLIRP-201ENST00000238688 CROCC2H7BZ55 1655 aa19.59■□□□□ 0.73
SLIRP-201ENST00000238688 DNMT1P26358 1616 aaKnown RBP19.58■□□□□ 0.73
SLIRP-201ENST00000238688 CEP170BQ9Y4F5 1589 aaPredicted RBP19.58■□□□□ 0.73
SLIRP-201ENST00000238688 KDM5DQ9BY66 1539 aa19.58■□□□□ 0.73
SLIRP-201ENST00000238688 CERKQ8TCT0 537 aa19.57■□□□□ 0.72
SLIRP-201ENST00000238688 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
SLIRP-201ENST00000238688 MROH1Q8NDA8 1641 aa19.57■□□□□ 0.72
SLIRP-201ENST00000238688 HFM1A2PYH4 1435 aa19.57■□□□□ 0.72
SLIRP-201ENST00000238688 ABCC5O15440 1437 aa19.57■□□□□ 0.72
SLIRP-201ENST00000238688 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
SLIRP-201ENST00000238688 EIF2AK4Q9P2K8 1649 aaKnown RBP19.56■□□□□ 0.72
SLIRP-201ENST00000238688 PZPP20742 1482 aa19.55■□□□□ 0.72
SLIRP-201ENST00000238688 FBXO31Q5XUX0 539 aaPredicted RBP19.55■□□□□ 0.72
SLIRP-201ENST00000238688 ROCK1Q13464 1354 aa19.54■□□□□ 0.72
SLIRP-201ENST00000238688 LTBP4Q8N2S1 1624 aa19.52■□□□□ 0.72
SLIRP-201ENST00000238688 A2ML1A8K2U0 1454 aa19.52■□□□□ 0.72
SLIRP-201ENST00000238688 PLA2R1Q13018 1463 aa19.52■□□□□ 0.72
SLIRP-201ENST00000238688 SHANK2Q9UPX8 1470 aa19.52■□□□□ 0.72
SLIRP-201ENST00000238688 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
SLIRP-201ENST00000238688 ABCC3O15438 1527 aa19.51■□□□□ 0.71
SLIRP-201ENST00000238688 CFAP65Q6ZU64 1925 aaKnown RBP19.51■□□□□ 0.71
SLIRP-201ENST00000238688 DUOX2Q9NRD8 1548 aa19.51■□□□□ 0.71
SLIRP-201ENST00000238688 DAPK1P53355 1430 aa19.51■□□□□ 0.71
SLIRP-201ENST00000238688 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
SLIRP-201ENST00000238688 CEP152O94986 1710 aa19.5■□□□□ 0.71
SLIRP-201ENST00000238688 ZC3H13Q5T200 1668 aaKnown RBP19.49■□□□□ 0.71
SLIRP-201ENST00000238688 TNRQ92752 1358 aa19.49■□□□□ 0.71
SLIRP-201ENST00000238688 RAB3GAP2Q9H2M9 1393 aa19.49■□□□□ 0.71
SLIRP-201ENST00000238688 KIF15Q9NS87 1388 aa19.46■□□□□ 0.71
SLIRP-201ENST00000238688 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
SLIRP-201ENST00000238688 ADGRL2O95490 1459 aa19.45■□□□□ 0.7
SLIRP-201ENST00000238688 SPATA31D1Q6ZQQ2 1576 aa19.44■□□□□ 0.7
SLIRP-201ENST00000238688 NAIPQ13075 1403 aa19.44■□□□□ 0.7
SLIRP-201ENST00000238688 PKD2Q13563 968 aa19.44■□□□□ 0.7
SLIRP-201ENST00000238688 RRP7BPQ9NSQ0 103 aa19.44■□□□□ 0.7
SLIRP-201ENST00000238688 PRDM15P57071 1507 aaPredicted RBP19.44■□□□□ 0.7
SLIRP-201ENST00000238688 DEPDC5O75140 1603 aa19.43■□□□□ 0.7
SLIRP-201ENST00000238688 ERBINQ96RT1 1412 aa19.43■□□□□ 0.7
SLIRP-201ENST00000238688 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
SLIRP-201ENST00000238688 ITGAEP38570 1179 aa19.43■□□□□ 0.7
SLIRP-201ENST00000238688 NEURL4Q96JN8 1562 aa19.43■□□□□ 0.7
SLIRP-201ENST00000238688 NLRP1Q9C000 1473 aa19.41■□□□□ 0.7
SLIRP-201ENST00000238688 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
SLIRP-201ENST00000238688 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
SLIRP-201ENST00000238688 ZNF335Q9H4Z2 1342 aaPredicted RBP19.38■□□□□ 0.69
SLIRP-201ENST00000238688 VWDEQ8N2E2 1590 aa19.37■□□□□ 0.69
SLIRP-201ENST00000238688 UGGT1Q9NYU2 1555 aa19.37■□□□□ 0.69
SLIRP-201ENST00000238688 ARHGAP31Q2M1Z3 1444 aa19.37■□□□□ 0.69
SLIRP-201ENST00000238688 ANKRD30AQ9BXX3 1397 aa19.36■□□□□ 0.69
SLIRP-201ENST00000238688 IQSEC2Q5JU85 1478 aa19.35■□□□□ 0.69
SLIRP-201ENST00000238688 UBR1Q8IWV7 1749 aa19.34■□□□□ 0.69
SLIRP-201ENST00000238688 THEMISQ8N1K5 641 aaPredicted RBP19.33■□□□□ 0.68
SLIRP-201ENST00000238688 LMTK2Q8IWU2 1503 aa19.32■□□□□ 0.68
SLIRP-201ENST00000238688 MED14O60244 1454 aa19.32■□□□□ 0.68
SLIRP-201ENST00000238688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.684e-8■■■■□ 19.3
SLIRP-201ENST00000238688 ANKLE2Q86XL3 938 aa19.29■□□□□ 0.68
SLIRP-201ENST00000238688 TIMELESSQ9UNS1 1208 aa19.29■□□□□ 0.68
SLIRP-201ENST00000238688 IQGAP1P46940 1657 aa19.27■□□□□ 0.68
SLIRP-201ENST00000238688 NPHP4O75161 1426 aaPredicted RBP19.26■□□□□ 0.67
SLIRP-201ENST00000238688 PIK3C2BO00750 1634 aa19.26■□□□□ 0.67
SLIRP-201ENST00000238688 STRCP1A6NGW2 1772 aa19.26■□□□□ 0.67
SLIRP-201ENST00000238688 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
SLIRP-201ENST00000238688 SYNMO15061 1565 aa19.25■□□□□ 0.67
SLIRP-201ENST00000238688 ARHGAP23Q9P227 1491 aa19.25■□□□□ 0.67
SLIRP-201ENST00000238688 KANK1Q14678 1352 aa19.25■□□□□ 0.67
SLIRP-201ENST00000238688 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
SLIRP-201ENST00000238688 SLIT1O75093 1534 aa19.24■□□□□ 0.67
SLIRP-201ENST00000238688 NOS1P29475 1434 aa19.23■□□□□ 0.67
SLIRP-201ENST00000238688 CPS1P31327 1500 aa19.21■□□□□ 0.67
SLIRP-201ENST00000238688 KDM5AP29375 1690 aaKnown RBP19.21■□□□□ 0.67
SLIRP-201ENST00000238688 UNC13BO14795 1591 aa19.21■□□□□ 0.67
SLIRP-201ENST00000238688 LTKP29376 864 aa19.21■□□□□ 0.67
SLIRP-201ENST00000238688 IDI1Q13907 227 aa19.2■□□□□ 0.66
SLIRP-201ENST00000238688 TET3O43151 1660 aa19.2■□□□□ 0.66
SLIRP-201ENST00000238688 SCAF11Q99590 1463 aaKnown RBP19.19■□□□□ 0.66
SLIRP-201ENST00000238688 MYO5BQ9ULV0 1848 aa19.17■□□□□ 0.66
SLIRP-201ENST00000238688 TMEM2Q9UHN6 1383 aa19.16■□□□□ 0.66
SLIRP-201ENST00000238688 ALKQ9UM73 1620 aa19.15■□□□□ 0.66
SLIRP-201ENST00000238688 UBAP1LF5GYI3 381 aa19.15■□□□□ 0.66
SLIRP-201ENST00000238688 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
SLIRP-201ENST00000238688 RPRD2Q5VT52 1461 aaKnown RBP19.15■□□□□ 0.66
SLIRP-201ENST00000238688 E9PCH4 1651 aa19.14■□□□□ 0.66
SLIRP-201ENST00000238688 ADGRB3O60242 1522 aa19.13■□□□□ 0.65
SLIRP-201ENST00000238688 IQGAP3Q86VI3 1631 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms